Details for gene set REGULATION_OF_SIGNAL

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	REGULATION_OF_SIGNAL_TRANSDUCTION
Enrichment Score (ES)	-0.47923326
Normalized Enrichment Score (NES)	-1.6507723
Nominal p-value	0.0
FDR q-value	0.3457568
FWER p-Value	0.99

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TFG	1415887_at 1438053_at	285	2.046	0.0045	No
2	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	297	2.018	0.0214	No
3	HMOX1	1448239_at	368	1.862	0.0342	No
4	ECM1	1448613_at	405	1.807	0.0481	No
5	VAPA	1416465_a_at 1416466_at 1448349_at	449	1.735	0.0611	No
6	TSC1	1422043_at 1439989_at 1455252_at	1023	1.168	0.0448	No
7	PPM1A	1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at	1247	1.028	0.0434	No
8	RIC8B	1435096_at 1439724_at	1340	0.965	0.0475	No
9	BST2	1424921_at	1485	0.902	0.0487	No
10	MAPK8IP3	1416437_a_at 1425975_a_at 1436676_at 1460628_at	1588	0.858	0.0514	No
11	GNG7	1455190_at	1616	0.849	0.0574	No
12	TRAF3IP2	1445985_at 1448508_at	1775	0.787	0.0570	No
13	SMAD2	1420634_a_at 1458304_at	1833	0.765	0.0609	No
14	LGALS9	1421217_a_at	1884	0.745	0.0650	No
15	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	1915	0.738	0.0700	No
16	UBE2N	1422559_at 1435384_at	2100	0.683	0.0674	No
17	CASP8	1424552_at	2154	0.670	0.0708	No
18	EEF1D	1428135_a_at 1439439_x_at 1449506_a_at 1459754_x_at	2178	0.664	0.0754	No
19	RPL17	1423855_x_at 1435791_x_at 1453752_at	2219	0.651	0.0792	No
20	GOLT1B	1449859_at 1460583_at	2437	0.596	0.0744	No
21	TSPAN6	1416872_at 1448501_at	2507	0.577	0.0762	No
22	CD24	1416034_at 1437502_x_at 1448182_a_at	2563	0.565	0.0785	No
23	GRK1	1421361_at	2566	0.564	0.0833	No
24	GPR89A	1424696_at	2607	0.556	0.0862	No
25	TNFRSF10B	1421296_at 1422344_s_at	2932	0.497	0.0756	No
26	LTBR	1416435_at	2962	0.491	0.0785	No
27	ATP6AP2	1423662_at 1437688_x_at 1439456_x_at	3025	0.481	0.0798	No
28	TDGF1	1450989_at	3070	0.474	0.0818	No
29	CBLC	1422666_at 1431692_a_at	3187	0.458	0.0804	No
30	TRIM13	1417888_at	3346	0.435	0.0769	No
31	TPD52L1	1418412_at	3443	0.424	0.0762	No
32	ZDHHC17	1434397_at 1447656_at 1455986_at 1458084_at 1458363_at	3934	0.370	0.0568	No
33	GRK5	1446361_at 1446998_at 1449514_at	3992	0.366	0.0574	No
34	GRK4	1420355_at 1454152_a_at	4179	0.349	0.0518	No
35	ABRA	1458455_at	4322	0.336	0.0482	No
36	PTEN	1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at	4381	0.333	0.0484	No
37	RAC1	1423734_at 1437674_at 1451086_s_at	4418	0.331	0.0496	No
38	PLK2	1427005_at	4421	0.330	0.0523	No
39	NFAM1	1425714_a_at 1428790_at	4503	0.324	0.0514	No
40	TGFB1	1420653_at 1445360_at	4620	0.315	0.0488	No
41	IL12A	1425454_a_at	4950	0.295	0.0362	No
42	LITAF	1416303_at 1416304_at	4961	0.294	0.0382	No
43	ADRB3	1421555_at 1455918_at	5107	0.285	0.0340	No
44	SHC1	1422853_at 1422854_at	5156	0.282	0.0342	No
45	PLEKHG5	1452248_at	5184	0.279	0.0354	No
46	TMED4	1448422_at 1448423_at	5972	0.231	0.0012	No
47	EDA2R	1440085_at	6023	0.228	0.0009	No
48	RGS9	1418691_at 1426033_at 1439635_at	6090	0.225	-0.0002	No
49	RGS5	1420940_x_at 1420941_at	6226	0.218	-0.0046	No
50	NEK6	1451043_at	6236	0.218	-0.0031	No
51	SECTM1	1419478_at 1419479_at	6295	0.215	-0.0039	No
52	GLI1	1449058_at	6457	0.207	-0.0095	No
53	SLA2	1437504_at 1451492_at	6505	0.205	-0.0099	No
54	PEG10	1427550_at	6518	0.204	-0.0087	No
55	PPP5C	1424115_at 1424116_x_at 1451242_a_at	6924	0.185	-0.0258	No
56	TLR6	1421352_at	7014	0.182	-0.0283	No
57	GIT1	1454759_at	7078	0.179	-0.0296	No
58	CDKN1C	1417649_at	7086	0.178	-0.0284	No
59	NF2	1421820_a_at 1427708_a_at 1450382_at 1451829_a_at	7252	0.170	-0.0346	No
60	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	7375	0.165	-0.0387	No
61	RIPK2	1421236_at 1450173_at	7399	0.164	-0.0384	No
62	CASP1	1449265_at	7423	0.162	-0.0381	No
63	CIDEA	1417956_at	7723	0.150	-0.0505	No
64	RHOC	1435394_s_at 1448605_at	7852	0.146	-0.0551	No
65	DMPK	1422989_a_at 1434944_at	7973	0.141	-0.0594	No
66	OTUD7B	1428953_at 1429139_at 1435552_at 1457716_at	7990	0.141	-0.0590	No
67	FRZB	1416658_at 1448424_at	8024	0.139	-0.0593	No
68	CDKN2B	1449152_at	8134	0.135	-0.0631	No
69	EREG	1419431_at	8422	0.125	-0.0753	No
70	GRM4	1457299_at	9181	0.098	-0.1093	No
71	RGN	1448852_at	9196	0.098	-0.1091	No
72	SLC35B2	1423927_at 1429007_at	9343	0.092	-0.1150	No
73	EGF	1418093_a_at	9401	0.090	-0.1168	No
74	PLCE1	1452398_at	9437	0.089	-0.1177	No
75	TNFSF10	1420412_at 1439680_at 1459913_at	9890	0.075	-0.1378	No
76	IL20	1421608_at	9897	0.075	-0.1375	No
77	ACVR2A	1437382_at 1439643_at 1445026_at 1451004_at	9937	0.073	-0.1386	No
78	LGALS1	1419573_a_at 1455439_a_at	10019	0.070	-0.1417	No
79	MYD88	1419272_at	10144	0.066	-0.1469	No
80	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	10516	0.053	-0.1635	No
81	TNFAIP3	1433699_at 1450829_at	10725	0.046	-0.1727	No
82	ALS2	1417783_at 1417784_at 1431608_at 1446183_at	10790	0.044	-0.1752	No
83	FASLG	1418803_a_at 1449235_at	10804	0.043	-0.1755	No
84	ZIC1	1423477_at 1439627_at	10933	0.039	-0.1810	No
85	CD40	1439221_s_at 1449473_s_at 1460415_a_at	11066	0.035	-0.1868	No
86	CANT1	1421476_a_at 1433709_at 1451688_s_at	11120	0.033	-0.1889	No
87	NDFIP2	1452066_a_at	11127	0.033	-0.1889	No
88	TRAF6	1421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at	11144	0.032	-0.1894	No
89	EDG2	1417143_at 1426110_a_at 1448606_at	11177	0.031	-0.1906	No
90	NCK2	1416796_at 1416797_at 1458432_at	11255	0.029	-0.1939	No
91	INHBA	1422053_at 1458291_at	11826	0.009	-0.2200	No
92	RIPK1	1419508_at 1439273_at 1449485_at	12198	-0.004	-0.2370	No
93	HIPK2	1424863_a_at 1424864_at 1425983_x_at 1428433_at 1429566_a_at 1432523_at 1446167_at 1448631_a_at 1456022_at 1458520_at	12349	-0.009	-0.2439	No
94	FGD5	1460578_at	12456	-0.014	-0.2486	No
95	OTX2	1425926_a_at	12558	-0.018	-0.2531	No
96	FGD1	1416865_at 1437369_at 1459278_at	12638	-0.020	-0.2566	No
97	RGS20	1421493_a_at 1443694_at 1446199_at	12969	-0.033	-0.2715	No
98	CDH13	1423551_at 1431824_at 1454015_a_at 1459535_at	13002	-0.034	-0.2726	No
99	MAPK8IP2	1418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at	13022	-0.035	-0.2732	No
100	FGD2	1419515_at	13046	-0.035	-0.2740	No
101	SLC44A2	1428065_at 1438559_x_at 1438860_a_at	13247	-0.042	-0.2828	No
102	FGD6	1419322_at 1435467_at	13279	-0.043	-0.2839	No
103	AMBP	1416649_at	13466	-0.052	-0.2920	No
104	ZDHHC13	1428307_at 1460048_at	13561	-0.055	-0.2958	No
105	CXXC5	1431469_a_at 1448960_at	13590	-0.056	-0.2966	No
106	REL	1420710_at	13822	-0.065	-0.3067	No
107	MDFI	1420713_a_at 1425924_at	13869	-0.067	-0.3082	No
108	MFN2	1441424_at 1448131_at 1451900_at	13879	-0.067	-0.3081	No
109	HGS	1416540_at	13940	-0.070	-0.3102	No
110	RHOA	1437628_s_at	14162	-0.080	-0.3197	No
111	RASGRP4	1425380_at	14211	-0.082	-0.3212	No
112	NDFIP1	1424820_a_at 1424821_at 1451493_at	14432	-0.091	-0.3305	No
113	ECT2	1419513_a_at	14564	-0.097	-0.3357	No
114	FGD3	1433398_at 1450235_at 1454593_at	14879	-0.112	-0.3492	No
115	ACVR2B	1419140_at 1439856_at	15308	-0.132	-0.3677	No
116	HTR2B	1422125_at	15310	-0.132	-0.3667	No
117	MIB2	1424862_s_at	15698	-0.153	-0.3831	No
118	SIGIRR	1449163_at	15839	-0.160	-0.3882	No
119	TGFA	1421942_s_at 1450421_at	16001	-0.170	-0.3941	No
120	TMEM9B	1417874_at 1448867_at	16273	-0.186	-0.4050	No
121	TRADD	1429117_at 1439910_a_at 1452622_a_at	16358	-0.193	-0.4072	No
122	BCL10	1418970_a_at 1418971_x_at 1418972_at 1443524_x_at	16383	-0.194	-0.4066	No
123	RGS11	1425245_a_at	16385	-0.194	-0.4050	No
124	CDC42BPB	1434652_at 1459167_at	16774	-0.222	-0.4209	No
125	ENG	1417271_a_at 1432176_a_at	16876	-0.230	-0.4236	No
126	RALBP1	1417248_at 1448634_at	17024	-0.241	-0.4283	No
127	RGS16	1426037_a_at 1451452_a_at 1455265_a_at	17165	-0.253	-0.4325	No
128	SLC20A1	1438824_at 1446441_at 1448568_a_at	17376	-0.271	-0.4399	No
129	TBK1	1422469_at 1445571_at 1460315_s_at	17420	-0.275	-0.4395	No
130	IL31RA	1445095_at 1451535_at	17488	-0.281	-0.4401	No
131	SMAD3	1450471_at 1450472_s_at 1454960_at	17658	-0.300	-0.4453	No
132	BRAP	1416738_at 1416739_a_at	17779	-0.313	-0.4481	No
133	MAPK8IP1	1425679_a_at 1440619_at	17822	-0.318	-0.4473	No
134	THY1	1423135_at	17892	-0.326	-0.4477	No
135	RGS4	1416286_at 1416287_at 1448285_at	18366	-0.392	-0.4661	No
136	SMURF1	1443393_at	18460	-0.408	-0.4668	No
137	GNG4	1417943_at 1417944_at 1447669_s_at	18469	-0.409	-0.4637	No
138	SNF1LK2	1444472_at 1457276_at	18609	-0.431	-0.4664	No
139	MAP3K7IP2	1423462_at 1451003_at	18648	-0.438	-0.4643	No
140	GJA1	1415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at	18973	-0.504	-0.4749	Yes
141	MDFIC	1427040_at	18985	-0.507	-0.4710	Yes
142	ACVR1	1416786_at 1416787_at 1448460_at 1457551_at	19040	-0.516	-0.4691	Yes
143	ARHGAP27	1416758_at 1457655_x_at	19115	-0.532	-0.4679	Yes
144	TRAF7	1424320_a_at	19130	-0.534	-0.4639	Yes
145	TICAM1	1454676_s_at	19263	-0.562	-0.4652	Yes
146	GPR177	1423824_at 1423825_at 1437434_a_at 1458319_at	19282	-0.566	-0.4611	Yes
147	SQSTM1	1440076_at 1442237_at 1444021_at 1450957_a_at	19309	-0.571	-0.4574	Yes
148	BIRC2	1418854_at	19403	-0.591	-0.4566	Yes
149	CLCF1	1437270_a_at 1437271_at 1450262_at	19457	-0.602	-0.4538	Yes
150	HCLS1	1418842_at	19542	-0.624	-0.4523	Yes
151	RELA	1419536_a_at	19605	-0.642	-0.4496	Yes
152	FADD	1416888_at 1446499_at	19759	-0.682	-0.4508	Yes
153	RGS2	1419247_at 1419248_at 1447830_s_at	19766	-0.686	-0.4451	Yes
154	MAP3K3	1426686_s_at 1426687_at 1436522_at	19854	-0.713	-0.4430	Yes
155	IKBKE	1417813_at	19878	-0.721	-0.4378	Yes
156	CENTD2	1428064_at	19891	-0.723	-0.4322	Yes
157	F2R	1437308_s_at 1450852_s_at	19947	-0.744	-0.4283	Yes
158	MALT1	1445068_at 1456126_at 1456429_at	19974	-0.754	-0.4230	Yes
159	FLNA	1426677_at	19992	-0.758	-0.4172	Yes
160	SNX6	1425148_a_at 1429497_s_at 1447234_s_at 1451602_at	20001	-0.760	-0.4110	Yes
161	RAMP1	1417481_at 1447474_at	20054	-0.777	-0.4067	Yes
162	CDC42BPG	1436197_at	20095	-0.794	-0.4017	Yes
163	NOTCH2	1451889_at 1455556_at	20247	-0.857	-0.4013	Yes
164	SCOTIN	1423986_a_at 1437503_a_at	20294	-0.878	-0.3959	Yes
165	TMEM101	1451315_at	20300	-0.882	-0.3885	Yes
166	ACVR1B	1422098_at 1433725_at	20303	-0.883	-0.3810	Yes
167	PTPRC	1422124_a_at 1440165_at	20336	-0.899	-0.3747	Yes
168	TAOK3	1435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at	20462	-0.957	-0.3722	Yes
169	ADRB2	1437302_at	20500	-0.974	-0.3655	Yes
170	TAX1BP3	1424169_at	20662	-1.091	-0.3635	Yes
171	SOST	1421245_at 1436240_at 1450179_at	20725	-1.143	-0.3565	Yes
172	RHOH	1429319_at 1441385_at 1443015_at	20758	-1.165	-0.3479	Yes
173	GRK6	1437436_s_at 1450480_a_at 1451672_at	20772	-1.176	-0.3384	Yes
174	CDC42BPA	1435847_at 1436380_at 1438449_at 1442260_at 1446945_at	20889	-1.252	-0.3329	Yes
175	SMAD4	1422485_at 1422486_a_at 1422487_at 1444205_at	20941	-1.295	-0.3241	Yes
176	ARF6	1418822_a_at 1418823_at 1418824_at	20976	-1.325	-0.3143	Yes
177	CC2D1A	1426422_at	20996	-1.351	-0.3035	Yes
178	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	21022	-1.372	-0.2928	Yes
179	CFLAR	1424996_at 1425686_at 1425687_at 1439600_at 1449317_at	21176	-1.546	-0.2865	Yes
180	CENTD3	1419833_s_at 1447407_at 1451282_at	21202	-1.573	-0.2741	Yes
181	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	21247	-1.621	-0.2622	Yes
182	RGS14	1419221_a_at	21271	-1.651	-0.2490	Yes
183	TRAT1	1427532_at 1437561_at	21275	-1.652	-0.2349	Yes
184	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	21293	-1.674	-0.2213	Yes
185	RGS12	1429380_at 1453129_a_at 1457511_at 1459566_at	21311	-1.703	-0.2074	Yes
186	SOCS1	1440047_at 1450446_a_at	21478	-2.008	-0.1977	Yes
187	TNFRSF1A	1417291_at	21491	-2.031	-0.1808	Yes
188	DTX1	1425822_a_at 1458643_at	21608	-2.295	-0.1663	Yes
189	TAOK2	1438208_at 1443642_at 1456826_at	21645	-2.389	-0.1474	Yes
190	EEF1E1	1444757_at 1449044_at	21707	-2.630	-0.1276	Yes
191	MIER1	1433755_at 1443400_at 1443879_at 1453760_at	21712	-2.649	-0.1049	Yes
192	ATP2C1	1431196_at 1434386_at 1437738_at 1439215_at 1442742_at	21747	-2.783	-0.0825	Yes
193	GIT2	1423391_at 1432160_at 1435925_at	21852	-3.576	-0.0565	Yes
194	FKBP1A	1416036_at 1438795_x_at 1438958_x_at 1448184_at 1456196_x_at	21931	-6.986	0.0001	Yes