Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	-0.47519895
Normalized Enrichment Score (NES)	-1.6228483
Nominal p-value	0.001754386
FDR q-value	0.19233434
FWER p-Value	0.438

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATF4	1438992_x_at 1439258_at 1448135_at	301	2.015	0.0064	No
2	CKM	1417614_at	406	1.806	0.0198	No
3	SERTAD4	1454877_at	436	1.753	0.0360	No
4	CSDA	1435800_a_at 1451012_a_at	609	1.530	0.0435	No
5	RBBP7	1415775_at 1456227_x_at	690	1.450	0.0544	No
6	DSTN	1417124_at	837	1.304	0.0608	No
7	RSU1	1419259_at	880	1.269	0.0716	No
8	LCP1	1415983_at 1448160_at	1051	1.147	0.0753	No
9	H3F3A	1423263_at 1442087_at	1620	0.848	0.0577	No
10	PELI2	1419006_s_at 1436966_at 1437181_at	1669	0.834	0.0639	No
11	NR2F1	1418157_at 1422412_x_at	2159	0.668	0.0481	No
12	ACTR3	1426392_a_at 1434968_a_at 1452051_at	2267	0.638	0.0496	No
13	IGF2AS	1427394_at	2711	0.533	0.0346	No
14	FOSB	1422134_at	2811	0.516	0.0352	No
15	COL1A1	1423669_at 1455494_at	3018	0.482	0.0306	No
16	ATF3	1449363_at	3055	0.476	0.0337	No
17	CTNND1	1422450_at 1437448_s_at 1445830_at	3200	0.456	0.0317	No
18	EMILIN2	1435264_at	3273	0.444	0.0328	No
19	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	3296	0.442	0.0362	No
20	PPARG	1420715_a_at	3510	0.415	0.0306	No
21	RHOJ	1418892_at 1444982_at	3556	0.408	0.0326	No
22	SLC16A6	1417884_at	3618	0.401	0.0339	No
23	TANK	1421640_a_at 1441513_at 1459668_at	3624	0.401	0.0377	No
24	SVIL	1427662_at 1460694_s_at 1460735_at	3666	0.396	0.0398	No
25	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	3801	0.382	0.0374	No
26	FGF8	1451882_a_at	3864	0.375	0.0383	No
27	SLC2A4	1415958_at 1415959_at	3939	0.369	0.0387	No
28	NFATC4	1423380_s_at 1432821_at 1454369_a_at	4000	0.365	0.0396	No
29	ACTN1	1427385_s_at 1428585_at 1452415_at	4153	0.351	0.0361	No
30	PDLIM7	1417959_at 1428319_at 1443785_x_at	4374	0.333	0.0293	No
31	NPR3	1435184_at 1448024_at 1450286_at	4909	0.297	0.0078	No
32	GPR20	1440021_at	4941	0.295	0.0093	No
33	GADD45G	1453851_a_at	5123	0.284	0.0038	No
34	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	5313	0.271	-0.0021	No
35	CNN1	1417917_at	5471	0.261	-0.0067	No
36	STARD13	1452604_at	5759	0.243	-0.0175	No
37	NKX2-2	1421112_at	5764	0.242	-0.0152	No
38	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	5876	0.236	-0.0180	No
39	ADAMTSL1	1430313_at	5881	0.236	-0.0158	No
40	CFL1	1448346_at 1455138_x_at	6120	0.223	-0.0245	No
41	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	6350	0.212	-0.0329	No
42	FLNC	1424063_at 1447812_x_at 1449073_at	6650	0.198	-0.0446	No
43	MYL9	1452670_at	6675	0.197	-0.0438	No
44	GGN	1445278_at	6730	0.193	-0.0443	No
45	TRIM3	1451663_a_at	6743	0.192	-0.0429	No
46	HOXB5	1418415_at	6755	0.192	-0.0415	No
47	COL23A1	1429209_at 1429210_at 1440911_at	6812	0.189	-0.0422	No
48	PLCB3	1448661_at	7047	0.180	-0.0511	No
49	MAPKAPK2	1426648_at	7123	0.176	-0.0528	No
50	FGF7	1422243_at 1438405_at	7202	0.172	-0.0547	No
51	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	7501	0.160	-0.0667	No
52	FGF17	1421523_at 1456239_at	7707	0.151	-0.0747	No
53	LRRTM4	1437214_at 1455937_at	8163	0.134	-0.0942	No
54	MYL7	1449071_at	8343	0.128	-0.1012	No
55	RARB	1454906_at	8366	0.127	-0.1009	No
56	TAGLN	1423505_at	8436	0.124	-0.1028	No
57	RIMS1	1435667_at 1438305_at 1444393_at	8514	0.121	-0.1052	No
58	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	8907	0.108	-0.1221	No
59	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	9229	0.096	-0.1359	No
60	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	9230	0.096	-0.1349	No
61	NPAS2	1421036_at 1421037_at	9236	0.096	-0.1342	No
62	SRF	1418255_s_at 1418256_at	9470	0.088	-0.1440	No
63	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	9676	0.082	-0.1526	No
64	RAI2	1452358_at	9692	0.081	-0.1525	No
65	NPPA	1456062_at	9843	0.076	-0.1586	No
66	MITF	1422025_at 1455214_at	9875	0.075	-0.1593	No
67	OTX1	1437601_at	9922	0.074	-0.1607	No
68	ASPA	1418472_at	10297	0.061	-0.1772	No
69	HOXC4	1422870_at	10313	0.060	-0.1773	No
70	PLN	1423359_at 1450952_at 1460332_at	10388	0.058	-0.1801	No
71	SRD5A2	1422960_at	10567	0.051	-0.1878	No
72	CXCL5	1419728_at	10590	0.051	-0.1883	No
73	ITGB6	1422983_at 1432281_a_at	10728	0.046	-0.1942	No
74	MID1	1422055_at 1438239_at 1441929_at 1443666_at	11209	0.030	-0.2159	No
75	CALN1	1425846_a_at	11260	0.028	-0.2179	No
76	SLC4A3	1418485_at 1453687_at	11574	0.018	-0.2321	No
77	CRH	1457984_at	11628	0.016	-0.2344	No
78	ASB2	1428444_at 1436259_at	11713	0.013	-0.2381	No
79	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	11757	0.012	-0.2400	No
80	CHST8	1428977_at	11854	0.008	-0.2443	No
81	EEF1B2	1448252_a_at	11989	0.004	-0.2505	No
82	HOXB4	1451761_at 1460379_at	12097	-0.000	-0.2554	No
83	DLL1	1419204_at	12454	-0.014	-0.2716	No
84	IL17B	1431693_a_at	12557	-0.018	-0.2761	No
85	EGR3	1421486_at 1436329_at	12603	-0.020	-0.2780	No
86	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	12611	-0.020	-0.2781	No
87	ITGB8	1436223_at	12767	-0.025	-0.2850	No
88	PPP2R3A	1455198_a_at	12886	-0.029	-0.2901	No
89	NRAS	1422688_a_at 1454060_a_at	12913	-0.030	-0.2910	No
90	PPAP2B	1429514_at 1446850_at 1448908_at	12982	-0.033	-0.2938	No
91	EFHD1	1448507_at	13116	-0.038	-0.2995	No
92	WNT3	1450763_x_at	13302	-0.044	-0.3076	No
93	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	13319	-0.045	-0.3079	No
94	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	13437	-0.050	-0.3127	No
95	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	14054	-0.075	-0.3403	No
96	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	14088	-0.077	-0.3410	No
97	ITGB1BP2	1423238_at	14199	-0.081	-0.3453	No
98	DVL3	1420457_at	14313	-0.086	-0.3496	No
99	SDPR	1416778_at 1416779_at 1443832_s_at	14422	-0.091	-0.3537	No
100	PODN	1435180_at	14424	-0.091	-0.3528	No
101	HOXC5	1439885_at 1450832_at 1456301_at	14590	-0.099	-0.3594	No
102	BNC2	1438861_at 1440593_at 1459132_at	14638	-0.101	-0.3605	No
103	HOXD10	1418606_at	14688	-0.103	-0.3618	No
104	MYH11	1418122_at 1448962_at	14699	-0.104	-0.3612	No
105	ABCA1	1421839_at 1421840_at 1450392_at	15162	-0.124	-0.3812	No
106	KRTCAP2	1417058_a_at 1417059_at	15256	-0.129	-0.3841	No
107	MRPS21	1422451_at	15321	-0.132	-0.3858	No
108	MYL6	1435041_at	15368	-0.134	-0.3865	No
109	MRGPRF	1425894_at	15443	-0.139	-0.3885	No
110	SCOC	1416267_at 1430999_a_at	15671	-0.151	-0.3974	No
111	MAP1A	1460566_at	15679	-0.152	-0.3962	No
112	CNN2	1450981_at	15715	-0.154	-0.3963	No
113	TNMD	1417979_at	16018	-0.171	-0.4085	No
114	ABR	1433477_at	16212	-0.183	-0.4155	No
115	FOS	1423100_at	16233	-0.185	-0.4146	No
116	BLOC1S1	1422614_s_at	16755	-0.221	-0.4363	No
117	VCL	1416156_at 1416157_at 1445256_at	16767	-0.221	-0.4346	No
118	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	16778	-0.222	-0.4328	No
119	TRIM46	1460568_at	16787	-0.223	-0.4309	No
120	MLLT7	1422149_at	16877	-0.230	-0.4327	No
121	ARPC4	1423588_at 1423589_at	17010	-0.240	-0.4364	No
122	MYADM	1423321_at 1439389_s_at	17124	-0.250	-0.4391	No
123	FOXE3	1422393_at	17151	-0.252	-0.4377	No
124	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17313	-0.265	-0.4425	No
125	PRKAB2	1435874_at 1435875_at 1442001_at	17435	-0.276	-0.4453	No
126	FGFRL1	1447878_s_at 1451912_a_at	17642	-0.298	-0.4517	No
127	KCNK3	1425341_at 1425342_a_at 1426058_a_at	17775	-0.313	-0.4547	No
128	CHD2	1444246_at 1445843_at	17842	-0.321	-0.4545	No
129	DGKG	1419756_at 1431167_at 1449584_at	17891	-0.326	-0.4534	No
130	TGFB1I1	1418136_at	18010	-0.341	-0.4554	No
131	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	18017	-0.342	-0.4522	No
132	SGK	1416041_at	18027	-0.343	-0.4492	No
133	LDB1	1452024_a_at	18101	-0.351	-0.4490	No
134	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	18205	-0.366	-0.4501	No
135	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	18436	-0.403	-0.4566	No
136	TAF5L	1448195_at	18500	-0.413	-0.4554	No
137	PFN1	1449018_at	18512	-0.415	-0.4517	No
138	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	18706	-0.448	-0.4561	No
139	EML4	1429612_at 1447838_x_at	18774	-0.462	-0.4545	No
140	DUSP10	1417163_at 1417164_at	18820	-0.470	-0.4519	No
141	MYLK	1425504_at 1425505_at 1425506_at	18845	-0.476	-0.4482	No
142	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	18895	-0.486	-0.4455	No
143	CASQ1	1422598_at	19541	-0.624	-0.4689	Yes
144	TADA3L	1417467_a_at 1448719_at	19549	-0.626	-0.4630	Yes
145	PHF12	1434922_at 1453579_at	19601	-0.641	-0.4589	Yes
146	IER2	1416442_at	19610	-0.643	-0.4528	Yes
147	ACTG2	1422340_a_at	19669	-0.656	-0.4489	Yes
148	ACTA1	1427735_a_at	19700	-0.666	-0.4436	Yes
149	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	19735	-0.676	-0.4383	Yes
150	VASP	1451097_at	19786	-0.691	-0.4337	Yes
151	MUS81	1431885_a_at 1450432_s_at	19812	-0.701	-0.4278	Yes
152	TAZ	1416207_at 1453785_at	19831	-0.708	-0.4215	Yes
153	LRRFIP1	1433842_at 1437477_at 1448487_at	19875	-0.719	-0.4163	Yes
154	JMJD1A	1426810_at	19946	-0.744	-0.4120	Yes
155	RUNDC1	1454829_at	19983	-0.757	-0.4061	Yes
156	FLNA	1426677_at	19992	-0.758	-0.3988	Yes
157	H2AFX	1416746_at	20032	-0.771	-0.3929	Yes
158	CSRP1	1425810_a_at 1425811_a_at	20266	-0.867	-0.3949	Yes
159	CFL2	1418066_at 1418067_at 1431432_at	20311	-0.887	-0.3880	Yes
160	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	20486	-0.969	-0.3863	Yes
161	CDC25B	1421963_a_at	20551	-1.007	-0.3791	Yes
162	RERE	1454670_at	20719	-1.135	-0.3754	Yes
163	GRK6	1437436_s_at 1450480_a_at 1451672_at	20772	-1.176	-0.3659	Yes
164	STAT5B	1422102_a_at 1422103_a_at	20955	-1.307	-0.3612	Yes
165	ARF6	1418822_a_at 1418823_at 1418824_at	20976	-1.325	-0.3488	Yes
166	DUSP5	1437199_at	21110	-1.471	-0.3401	Yes
167	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	21196	-1.570	-0.3283	Yes
168	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	21247	-1.621	-0.3143	Yes
169	MAP2K6	1426850_a_at 1459292_at	21374	-1.800	-0.3020	Yes
170	JUNB	1415899_at	21378	-1.811	-0.2840	Yes
171	EGR1	1417065_at	21457	-1.965	-0.2678	Yes
172	KCNH2	1449544_a_at	21520	-2.088	-0.2497	Yes
173	RASSF2	1428392_at 1444889_at	21601	-2.281	-0.2305	Yes
174	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	21632	-2.349	-0.2083	Yes
175	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	21689	-2.573	-0.1850	Yes
176	EGR2	1427682_a_at 1427683_at	21692	-2.582	-0.1591	Yes
177	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21771	-2.909	-0.1335	Yes
178	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	21800	-3.133	-0.1033	Yes
179	CDKN1B	1419497_at 1434045_at	21841	-3.422	-0.0708	Yes
180	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	21855	-3.600	-0.0353	Yes
181	UNC84B	1433832_at 1439238_at	21879	-3.868	0.0025	Yes