Details for gene set V$E2F1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F1_Q6
Enrichment Score (ES)	0.35925373
Normalized Enrichment Score (NES)	1.2745055
Nominal p-value	0.046753246
FDR q-value	0.4348472
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	14	5.027	0.0494	Yes
2	CDC25A	1417131_at 1417132_at 1445995_at	47	3.621	0.0839	Yes
3	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	71	3.312	0.1158	Yes
4	MYC	1424942_a_at	351	1.908	0.1220	Yes
5	NRK	1436399_s_at 1450078_at 1450079_at	373	1.858	0.1395	Yes
6	SFRS7	1424033_at 1424883_s_at 1436871_at	488	1.687	0.1510	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	679	1.462	0.1569	Yes
8	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	697	1.440	0.1704	Yes
9	SLC25A3	1416300_a_at 1440302_at	707	1.429	0.1842	Yes
10	NOLC1	1428869_at 1428870_at 1450087_a_at	716	1.419	0.1980	Yes
11	PRPS1	1416052_at	746	1.396	0.2105	Yes
12	MCM4	1416214_at 1436708_x_at	761	1.378	0.2236	Yes
13	EZH2	1416544_at 1444263_at	971	1.198	0.2259	Yes
14	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	990	1.190	0.2369	Yes
15	POLE2	1427094_at 1431440_at	1007	1.177	0.2479	Yes
16	DNAJC9	1426473_at	1037	1.159	0.2581	Yes
17	ATF5	1425927_a_at	1088	1.118	0.2669	Yes
18	SNRPD1	1416336_s_at	1126	1.101	0.2761	Yes
19	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	1152	1.082	0.2858	Yes
20	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	1232	1.037	0.2924	Yes
21	PHF5A	1424170_at	1251	1.024	0.3018	Yes
22	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	1307	0.986	0.3091	Yes
23	AK2	1448450_at 1448451_at	1539	0.880	0.3072	Yes
24	CDCA7	1428069_at 1445681_at	1541	0.878	0.3159	Yes
25	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	1599	0.855	0.3218	Yes
26	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	1677	0.829	0.3265	Yes
27	RANBP1	1422547_at	1763	0.792	0.3305	Yes
28	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	1785	0.784	0.3374	Yes
29	GMNN	1417506_at	1846	0.760	0.3422	Yes
30	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	1929	0.733	0.3457	Yes
31	PCNA	1417947_at	1938	0.732	0.3526	Yes
32	E2F3	1427462_at 1434564_at	2034	0.705	0.3552	Yes
33	RQCD1	1450887_at	2238	0.643	0.3523	Yes
34	CDC5L	1428092_at 1460429_at	2287	0.633	0.3564	Yes
35	GPRC5B	1424613_at 1451411_at	2359	0.614	0.3593	Yes
36	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	2721	0.532	0.3480	No
37	TOPBP1	1452241_at 1458480_at	3030	0.480	0.3386	No
38	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	3377	0.432	0.3270	No
39	UNG	1425753_a_at	3425	0.426	0.3291	No
40	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	3640	0.399	0.3232	No
41	SLC9A5	1420070_a_at 1455760_at	3799	0.382	0.3198	No
42	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	3821	0.380	0.3226	No
43	MRPL40	1448849_at	4093	0.358	0.3137	No
44	HMGA1	1416184_s_at	4125	0.354	0.3158	No
45	ACO2	1436934_s_at 1442102_at 1451002_at	4168	0.350	0.3173	No
46	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	4546	0.321	0.3032	No
47	POLR2A	1422311_a_at 1426242_at 1458710_at	4584	0.318	0.3047	No
48	PHF15	1430081_at 1455345_at	4596	0.317	0.3073	No
49	PIM1	1423006_at 1435458_at	4639	0.314	0.3085	No
50	MSH5	1430771_a_at 1449537_at	4713	0.309	0.3083	No
51	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	4985	0.292	0.2987	No
52	EPHB1	1455188_at	5255	0.275	0.2891	No
53	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	6293	0.215	0.2436	No
54	GATA1	1449232_at	6555	0.202	0.2336	No
55	BRMS1L	1452850_s_at 1460443_at	7088	0.178	0.2110	No
56	ATAD2	1436174_at 1443146_at 1443229_at	7565	0.157	0.1907	No
57	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	7604	0.154	0.1904	No
58	MSH2	1416988_at 1447888_x_at	7685	0.152	0.1883	No
59	CORT	1449820_at	7878	0.145	0.1809	No
60	HCN3	1451023_at	7936	0.143	0.1797	No
61	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	8070	0.137	0.1750	No
62	SEMA6A	1421414_a_at 1425903_at 1436458_at	8121	0.136	0.1740	No
63	PPM1D	1434142_at 1449092_at 1459069_at	8534	0.121	0.1563	No
64	PAQR4	1423101_at	8890	0.108	0.1411	No
65	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	8974	0.105	0.1383	No
66	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	9016	0.104	0.1375	No
67	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	9237	0.096	0.1283	No
68	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	9353	0.092	0.1239	No
69	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	9426	0.090	0.1215	No
70	SALL1	1450489_at	9742	0.080	0.1078	No
71	GABRB3	1421189_at 1421190_at 1435021_at	10054	0.069	0.0942	No
72	EED	1448653_at	10498	0.054	0.0744	No
73	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	10793	0.044	0.0614	No
74	HS6ST3	1421599_at	10949	0.038	0.0546	No
75	PKMYT1	1418481_at 1438601_at	10982	0.037	0.0535	No
76	FMO4	1425799_at 1444852_at	11157	0.032	0.0459	No
77	CACNA1G	1423365_at	11306	0.027	0.0393	No
78	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	11757	0.012	0.0188	No
79	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	11763	0.011	0.0187	No
80	HNRPR	1427129_a_at 1438807_at 1452030_a_at	11788	0.011	0.0177	No
81	MCM3	1420029_at 1426653_at	11978	0.004	0.0090	No
82	RASAL2	1436910_at 1444671_at	12070	0.001	0.0048	No
83	KCNA6	1421568_at 1441049_at 1456954_at	12543	-0.018	-0.0167	No
84	STMN1	1415849_s_at	12666	-0.021	-0.0220	No
85	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	12766	-0.025	-0.0263	No
86	FHOD1	1435557_at	13087	-0.037	-0.0407	No
87	STAG2	1421849_at 1450396_at	13191	-0.041	-0.0450	No
88	POLD1	1448187_at 1456055_x_at	13336	-0.046	-0.0512	No
89	HOXC10	1439798_at	13359	-0.047	-0.0517	No
90	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	13437	-0.050	-0.0547	No
91	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	13490	-0.053	-0.0566	No
92	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	13572	-0.056	-0.0598	No
93	PCSK1	1421396_at	13586	-0.056	-0.0598	No
94	CLSPN	1441984_at 1456280_at	13667	-0.059	-0.0629	No
95	CCNT1	1419313_at 1456477_at	13828	-0.066	-0.0696	No
96	MCM8	1429557_at	13884	-0.068	-0.0715	No
97	RPS20	1456373_x_at 1456436_x_at	14061	-0.075	-0.0788	No
98	KLF5	1430255_at 1451021_a_at 1451739_at	14182	-0.081	-0.0835	No
99	PODN	1435180_at	14424	-0.091	-0.0937	No
100	ARID4A	1436191_at 1438464_at 1456420_at	14824	-0.109	-0.1109	No
101	KBTBD7	1428192_at 1439865_at 1452700_s_at	15020	-0.118	-0.1187	No
102	IL4I1	1419192_at	15139	-0.123	-0.1229	No
103	IPO7	1442511_at 1454955_at 1458165_at	15307	-0.132	-0.1293	No
104	FANCC	1442265_at 1447632_at 1450861_at	15475	-0.140	-0.1355	No
105	ADAMTS2	1435990_at 1455720_at 1457058_at	15980	-0.169	-0.1570	No
106	RRM2	1416120_at 1434437_x_at 1448226_at	16019	-0.171	-0.1570	No
107	KCNS2	1421342_at 1441211_at 1457325_at	16294	-0.188	-0.1678	No
108	ORC1L	1422663_at 1443172_at	16631	-0.211	-0.1811	No
109	SYNGR4	1418875_at	16652	-0.213	-0.1799	No
110	ARHGAP11A	1438434_at	16836	-0.227	-0.1860	No
111	ILF3	1422546_at 1436802_at 1460669_at	16974	-0.238	-0.1900	No
112	AP4M1	1418846_at	16993	-0.239	-0.1884	No
113	DNAJC5G	1437814_at	17005	-0.240	-0.1865	No
114	HNRPUL1	1451984_at	17134	-0.250	-0.1899	No
115	CBX3	1432628_at 1454305_at	17192	-0.256	-0.1900	No
116	TYRO3	1425248_a_at 1425249_a_at	17274	-0.262	-0.1911	No
117	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	17315	-0.265	-0.1903	No
118	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	17441	-0.277	-0.1933	No
119	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	17495	-0.282	-0.1929	No
120	CTCF	1418330_at 1449042_at	17993	-0.339	-0.2124	No
121	FBXO5	1429499_at	18147	-0.358	-0.2158	No
122	AP1S1	1416087_at	18222	-0.369	-0.2156	No
123	CDT1	1424143_a_at 1424144_at 1455791_at	18306	-0.382	-0.2156	No
124	TBX6	1449868_at	18377	-0.393	-0.2149	No
125	NELL2	1423560_at 1423561_at	18442	-0.405	-0.2138	No
126	FANCG	1420960_at	18630	-0.435	-0.2181	No
127	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	18684	-0.445	-0.2161	No
128	PRKDC	1451576_at	18721	-0.450	-0.2133	No
129	MCM2	1434079_s_at 1448777_at	18785	-0.465	-0.2115	No
130	RAVER1	1427110_at 1427111_s_at 1444966_at	18790	-0.465	-0.2071	No
131	PHC1	1423212_at	18844	-0.476	-0.2048	No
132	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	18856	-0.477	-0.2005	No
133	ALDH6A1	1448104_at	18987	-0.507	-0.2015	No
134	CDC6	1417019_a_at	19026	-0.514	-0.1981	No
135	MAZ	1427099_at	19052	-0.517	-0.1941	No
136	ZCCHC8	1423755_at 1441639_at	19436	-0.598	-0.2057	No
137	USP37	1434242_at 1438212_at	19472	-0.606	-0.2013	No
138	HNRPD	1425142_a_at 1446083_at	19571	-0.632	-0.1995	No
139	UGCGL1	1432318_at 1448009_at 1455839_at	19612	-0.643	-0.1950	No
140	H2AFV	1428029_a_at 1436596_at	19618	-0.644	-0.1888	No
141	YBX2	1420762_a_at	19718	-0.671	-0.1867	No
142	FLI1	1422024_at 1433512_at 1441584_at	19797	-0.694	-0.1833	No
143	USP52	1426700_a_at	19850	-0.713	-0.1786	No
144	ACBD6	1452601_a_at 1453199_at	19986	-0.757	-0.1773	No
145	CASP8AP2	1449217_at	20094	-0.794	-0.1743	No
146	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	20102	-0.796	-0.1667	No
147	MYH10	1441057_at 1452740_at	20198	-0.835	-0.1628	No
148	ZBTB4	1429722_at 1460488_at	20205	-0.839	-0.1547	No
149	MXD3	1422970_at 1438847_at 1448878_at	20437	-0.942	-0.1559	No
150	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	20591	-1.032	-0.1527	No
151	PHF13	1455175_at	20637	-1.070	-0.1441	No
152	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20709	-1.130	-0.1361	No
153	E2F1	1417878_at 1431875_a_at 1447840_x_at	20873	-1.238	-0.1313	No
154	SLCO3A1	1418030_at 1434537_at 1448918_at	20910	-1.274	-0.1203	No
155	H2AFZ	1441370_at	20950	-1.301	-0.1091	No
156	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	21022	-1.372	-0.0988	No
157	SP3	1431804_a_at 1459360_at	21213	-1.585	-0.0917	No
158	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	21259	-1.639	-0.0775	No
159	ID3	1416630_at	21385	-1.829	-0.0650	No
160	E2F7	1437187_at	21416	-1.894	-0.0475	No
161	STK35	1431107_at 1439802_at	21447	-1.940	-0.0296	No
162	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	21651	-2.424	-0.0148	No
163	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21748	-2.793	0.0085	No