Details for gene set V$COUP_DR1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	V$COUP_DR1_Q6
Enrichment Score (ES)	0.36734363
Normalized Enrichment Score (NES)	1.3130589
Nominal p-value	0.030150754
FDR q-value	0.49620554
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	98	3.045	0.0247	Yes
2	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	107	2.957	0.0527	Yes
3	TREX1	1450672_a_at 1459618_at	200	2.416	0.0717	Yes
4	PEX16	1425021_a_at 1436253_at 1447801_x_at	218	2.314	0.0931	Yes
5	NR4A3	1421079_at 1421080_at	228	2.289	0.1147	Yes
6	UBE2R2	1415768_a_at 1443742_x_at 1444460_at	336	1.931	0.1283	Yes
7	SLC11A2	1417584_at 1426441_at 1441709_at 1447333_at 1452078_a_at	364	1.868	0.1450	Yes
8	RREB1	1428657_at 1434741_at 1438216_at 1442047_at 1452862_at	419	1.782	0.1596	Yes
9	SMYD5	1425479_at 1447749_at 1451722_s_at	421	1.779	0.1766	Yes
10	HSPD1	1426351_at	433	1.757	0.1930	Yes
11	REST	1425564_at 1425565_at 1428227_at	454	1.729	0.2087	Yes
12	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	485	1.692	0.2235	Yes
13	TCEA2	1418107_at 1440791_x_at	765	1.374	0.2239	Yes
14	DPF3	1441659_at 1442686_at 1450162_at	830	1.315	0.2336	Yes
15	ENO3	1417951_at 1449631_at	832	1.311	0.2461	Yes
16	NDUFS1	1425143_a_at 1453354_at	979	1.194	0.2508	Yes
17	CNTFR	1419429_at 1431663_a_at	1107	1.109	0.2557	Yes
18	ID1	1425895_a_at	1130	1.099	0.2652	Yes
19	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	1226	1.039	0.2708	Yes
20	DNAJA2	1417182_at 1417183_at 1429476_s_at 1457233_at	1272	1.011	0.2784	Yes
21	TRAF4	1416571_at 1460642_at	1280	1.005	0.2878	Yes
22	SAP18	1419443_at 1419444_at 1419445_s_at 1434646_s_at 1449480_at	1306	0.987	0.2961	Yes
23	APOM	1419095_a_at 1419096_at	1412	0.934	0.3002	Yes
24	AHCYL1	1425576_at 1426830_a_at 1426831_at	1446	0.922	0.3075	Yes
25	ABTB2	1433453_a_at 1433454_at 1443497_at 1444771_at	1474	0.908	0.3150	Yes
26	SS18	1419360_a_at 1419361_at 1436257_at 1458684_at	1490	0.900	0.3230	Yes
27	FBLN1	1422540_at 1439688_at 1451119_a_at	1687	0.822	0.3218	Yes
28	STMN2	1423280_at 1423281_at	1863	0.754	0.3210	Yes
29	PAPD4	1419183_at 1433568_at	1867	0.753	0.3281	Yes
30	TPCN1	1434930_at 1451771_at 1451772_at	1875	0.749	0.3350	Yes
31	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	2000	0.714	0.3362	Yes
32	MRPS28	1452585_at	2123	0.677	0.3370	Yes
33	NR2F1	1418157_at 1422412_x_at	2159	0.668	0.3418	Yes
34	CXCL14	1418456_a_at 1418457_at	2225	0.647	0.3451	Yes
35	RQCD1	1450887_at	2238	0.643	0.3507	Yes
36	MED8	1431423_a_at 1442417_at	2260	0.639	0.3559	Yes
37	STOML2	1448774_at	2342	0.619	0.3581	Yes
38	NR2F6	1449846_at 1460647_a_at 1460648_at	2663	0.541	0.3486	Yes
39	WTAP	1438471_at 1452401_at 1454805_at	2688	0.536	0.3526	Yes
40	PDZK1	1431701_a_at	2804	0.518	0.3523	Yes
41	TOMM70A	1417192_at 1426675_at 1426676_s_at 1447239_at 1457353_at	2898	0.503	0.3529	Yes
42	HMGCS2	1423858_a_at 1431833_a_at	2906	0.502	0.3573	Yes
43	PALM	1422034_a_at 1423967_at 1439927_at 1457217_at	2909	0.501	0.3621	Yes
44	LAMP2	1416343_a_at 1416344_at 1428094_at 1434503_s_at	2946	0.494	0.3652	Yes
45	WBSCR16	1416622_at	3078	0.473	0.3637	Yes
46	CKS1B	1416698_a_at 1439514_at 1448441_at 1456268_at	3117	0.467	0.3664	Yes
47	RNF139	1429425_at 1429426_at	3193	0.457	0.3673	Yes
48	KIRREL3	1431402_at 1441357_at 1452728_at	3461	0.421	0.3591	No
49	FABP1	1417556_at 1448764_a_at	4015	0.364	0.3372	No
50	ZIC4	1421539_at 1456417_at	4089	0.358	0.3373	No
51	PDLIM7	1417959_at 1428319_at 1443785_x_at	4374	0.333	0.3274	No
52	CRABP2	1451191_at	4444	0.328	0.3274	No
53	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	4498	0.325	0.3281	No
54	FOXA1	1418496_at	4617	0.316	0.3257	No
55	PTHR1	1417092_at	4705	0.309	0.3246	No
56	HOXD3	1421537_at 1437664_at	4723	0.308	0.3268	No
57	HSPE1	1450668_s_at	4864	0.299	0.3233	No
58	SHC1	1422853_at 1422854_at	5156	0.282	0.3126	No
59	SCNM1	1428364_at	5551	0.255	0.2969	No
60	RRBP1	1426123_a_at 1436660_at 1449221_a_at 1452767_at	5875	0.236	0.2844	No
61	PRDM1	1420425_at 1444997_at	6009	0.229	0.2804	No
62	THPO	1449569_at	6056	0.227	0.2805	No
63	NR2C1	1418605_at 1439490_at 1446194_at 1449157_at 1458338_x_at	6109	0.224	0.2803	No
64	GDNF	1419080_at	6188	0.220	0.2788	No
65	SLC26A3	1421445_at 1427547_a_at 1429467_s_at 1453151_at	6197	0.219	0.2805	No
66	ATP5O	1416278_a_at	6318	0.214	0.2771	No
67	EFEMP1	1427183_at	6633	0.198	0.2645	No
68	OBSCN	1443632_at	6813	0.189	0.2581	No
69	PRODH2	1432099_a_at	6852	0.188	0.2582	No
70	MRPL11	1417918_at 1437131_x_at 1437839_x_at 1438080_at	7172	0.174	0.2452	No
71	NRAP	1421253_at	7557	0.157	0.2290	No
72	CLCNKA	1450182_at	8107	0.136	0.2051	No
73	EIF4EBP2	1417084_at 1436158_at 1437733_at 1455575_at 1456613_at	8108	0.136	0.2064	No
74	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	8466	0.123	0.1912	No
75	PRKAG1	1417690_at 1433533_x_at 1457803_at	8651	0.117	0.1839	No
76	DCTN2	1424461_at	9003	0.104	0.1687	No
77	PAPLN	1420521_at	9019	0.104	0.1690	No
78	PIPOX	1449374_at	9246	0.096	0.1596	No
79	TTYH1	1422694_at 1422696_at 1426617_a_at	9386	0.091	0.1540	No
80	CLDN15	1418920_at	9710	0.081	0.1400	No
81	SALL1	1450489_at	9742	0.080	0.1393	No
82	IRX6	1427383_at	9763	0.079	0.1392	No
83	PRDM16	1429308_at 1429309_at 1440745_at 1440870_at 1443251_at	10329	0.060	0.1138	No
84	PNOC	1425892_a_at	10390	0.058	0.1116	No
85	SLC23A3	1460042_at	10576	0.051	0.1035	No
86	HSD17B8	1454987_a_at	10675	0.048	0.0995	No
87	SLC39A5	1429523_a_at	10689	0.047	0.0993	No
88	PRKCD	1422847_a_at 1442256_at	10785	0.044	0.0954	No
89	PGF	1418471_at	10941	0.039	0.0887	No
90	PRKCSH	1416339_a_at	11075	0.034	0.0829	No
91	ATP2B1	1428936_at 1428937_at 1452969_at 1458346_x_at	11278	0.028	0.0738	No
92	CYP26A1	1419430_at	11421	0.023	0.0675	No
93	COMMD3	1433539_at 1454642_a_at	11468	0.021	0.0656	No
94	MICAL2	1438726_at 1455685_at	11568	0.018	0.0613	No
95	AGPS	1443797_at 1454918_at	11651	0.016	0.0576	No
96	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	11763	0.011	0.0526	No
97	POLR2H	1424473_at	11897	0.007	0.0466	No
98	SYTL2	1421594_a_at 1456593_at	11946	0.005	0.0444	No
99	F12	1420496_at	11980	0.004	0.0430	No
100	EEF1B2	1448252_a_at	11989	0.004	0.0426	No
101	LMO3	1455754_at	12650	-0.021	0.0125	No
102	EFNB3	1423085_at	12840	-0.028	0.0041	No
103	FGD2	1419515_at	13046	-0.035	-0.0050	No
104	FOXA3	1431900_a_at	13245	-0.042	-0.0137	No
105	INSR	1421380_at 1450225_at	13260	-0.043	-0.0139	No
106	ALPI	1431077_at	13347	-0.047	-0.0175	No
107	PPP1R14D	1417990_at	13451	-0.051	-0.0217	No
108	GPR124	1418379_s_at	13517	-0.053	-0.0242	No
109	ZBTB12	1436382_at	13536	-0.054	-0.0245	No
110	CLSPN	1441984_at 1456280_at	13667	-0.059	-0.0299	No
111	BIN3	1417691_at	13721	-0.061	-0.0317	No
112	LCAT	1417043_at	13972	-0.071	-0.0425	No
113	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	14054	-0.075	-0.0456	No
114	SLC16A9	1429726_at 1429727_at 1454104_a_at	14064	-0.075	-0.0452	No
115	FXYD1	1421374_a_at	14152	-0.079	-0.0485	No
116	ADAMTS19	1442459_at 1446513_at	14185	-0.081	-0.0492	No
117	CSF2	1427429_at	14310	-0.086	-0.0541	No
118	IBRDC2	1425282_at 1439153_at 1443252_at 1456834_at	14680	-0.103	-0.0700	No
119	MAP2K3	1425456_a_at 1451714_a_at	14805	-0.108	-0.0747	No
120	CLCN2	1449248_at	14816	-0.109	-0.0741	No
121	PRRX2	1432331_a_at	15006	-0.117	-0.0817	No
122	KLK6	1448982_at	15517	-0.142	-0.1037	No
123	PRKACA	1447720_x_at 1450519_a_at	15605	-0.147	-0.1063	No
124	HOXA3	1427433_s_at 1441070_at 1452421_at	16013	-0.171	-0.1234	No
125	ERBB2	1424919_at	16091	-0.176	-0.1253	No
126	OVOL1	1419051_at 1419052_at	16432	-0.198	-0.1390	No
127	GOLGA4	1417674_s_at 1448803_at 1460213_at	16491	-0.201	-0.1397	No
128	ZSWIM3	1428313_at 1444571_at 1457785_at	16572	-0.207	-0.1414	No
129	NCDN	1416852_a_at 1416853_at	16594	-0.208	-0.1404	No
130	SFRS4	1448778_at	16705	-0.217	-0.1433	No
131	TNRC4	1452851_at	16892	-0.231	-0.1497	No
132	HOXC13	1425874_at	17049	-0.244	-0.1545	No
133	GLG1	1417087_at 1448579_at 1448580_at 1460554_s_at	17101	-0.248	-0.1545	No
134	POU5F1	1417945_at	17123	-0.250	-0.1530	No
135	SLC26A6	1416275_at	17125	-0.250	-0.1507	No
136	PAX7	1444596_at 1452510_at	17136	-0.250	-0.1487	No
137	PKP3	1418831_at 1418832_at	17159	-0.253	-0.1473	No
138	ARHGEF7	1424482_at 1449066_a_at	17396	-0.273	-0.1556	No
139	GBL	1415842_at 1415843_at	17559	-0.290	-0.1602	No
140	SMAD3	1450471_at 1450472_s_at 1454960_at	17658	-0.300	-0.1619	No
141	ASXL1	1434561_at 1435077_at 1458380_at	17670	-0.301	-0.1595	No
142	SYMPK	1428673_at	17681	-0.302	-0.1570	No
143	KCNE1L	1416640_at	17843	-0.321	-0.1613	No
144	GABARAPL2	1423187_at 1441376_at 1444956_at 1459477_at	17957	-0.335	-0.1633	No
145	LRP1	1442849_at 1448655_at	17987	-0.338	-0.1614	No
146	AP1B1	1416279_at	18364	-0.392	-0.1749	No
147	PFN1	1449018_at	18512	-0.415	-0.1777	No
148	ESRRA	1442864_at 1460652_at	18699	-0.448	-0.1820	No
149	DCTN1	1422521_at 1435414_s_at	18817	-0.469	-0.1828	No
150	MAGMAS	1416765_s_at	18838	-0.474	-0.1792	No
151	PAK4	1428548_at	19121	-0.533	-0.1870	No
152	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	19296	-0.569	-0.1896	No
153	APEX2	1424322_at 1425954_a_at	19311	-0.571	-0.1847	No
154	AGPAT1	1421024_at 1421025_at	19454	-0.601	-0.1855	No
155	USP37	1434242_at 1438212_at	19472	-0.606	-0.1805	No
156	MAP3K11	1450669_at	19668	-0.656	-0.1831	No
157	ACTA1	1427735_a_at	19700	-0.666	-0.1782	No
158	YBX2	1420762_a_at	19718	-0.671	-0.1725	No
159	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	19735	-0.676	-0.1667	No
160	HDAC11	1451229_at 1454803_a_at	19781	-0.690	-0.1622	No
161	USP52	1426700_a_at	19850	-0.713	-0.1585	No
162	MYH10	1441057_at 1452740_at	20198	-0.835	-0.1664	No
163	SCOTIN	1423986_a_at 1437503_a_at	20294	-0.878	-0.1623	No
164	PCTK1	1415956_a_at 1438314_at 1443296_at 1460169_a_at	20335	-0.899	-0.1556	No
165	RNF5	1422888_at	20343	-0.900	-0.1472	No
166	ZYX	1417240_at 1438552_x_at	20379	-0.916	-0.1401	No
167	NR4A1	1416505_at	20684	-1.112	-0.1434	No
168	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20709	-1.130	-0.1336	No
169	TTR	1451580_a_at 1454608_x_at 1455913_x_at 1459737_s_at	20718	-1.135	-0.1231	No
170	LMAN2L	1435475_at 1441295_at	20818	-1.202	-0.1161	No
171	RFX1	1422109_at 1436059_at	20824	-1.207	-0.1047	No
172	ETFDH	1451084_at 1458152_at	20892	-1.257	-0.0958	No
173	ARF6	1418822_a_at 1418823_at 1418824_at	20976	-1.325	-0.0869	No
174	HIBADH	1423780_at 1435967_s_at 1442848_at 1446297_at	21194	-1.569	-0.0818	No
175	GBF1	1415709_s_at 1415757_at 1432677_at 1438207_at	21660	-2.442	-0.0797	No
176	TOM1L2	1425659_at 1434385_at 1437915_at 1441586_at 1451795_at	21720	-2.687	-0.0566	No
177	HIP2	1417186_at 1417187_at 1417188_s_at 1441012_at 1442671_at 1443148_at 1444212_at	21737	-2.749	-0.0310	No
178	PSMF1	1424369_at 1424370_s_at 1424371_at 1451337_at	21892	-4.167	0.0019	No