Details for gene set V$AP2_Q6

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$AP2_Q6_01
Enrichment Score (ES)	-0.4744548
Normalized Enrichment Score (NES)	-1.6042879
Nominal p-value	0.0016501651
FDR q-value	0.107660554
FWER p-Value	0.514

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RGMA	1438241_at	195	2.445	0.0162	No
2	NEO1	1423513_at 1434931_at 1440789_at 1444295_at 1447693_s_at 1447694_x_at 1459485_at	196	2.445	0.0415	No
3	ERF	1422114_at 1435561_at	265	2.119	0.0602	No
4	RAP1GDS1	1425266_a_at 1459768_x_at	725	1.410	0.0536	No
5	CIRBP	1416332_at	949	1.217	0.0559	No
6	MTCH2	1430474_a_at 1430969_at 1437806_x_at 1438842_at 1438843_x_at 1448654_at	1299	0.993	0.0501	No
7	EIF4G2	1415863_at 1452758_s_at	1335	0.969	0.0585	No
8	RPL36AL	1448697_s_at	1482	0.904	0.0611	No
9	HDLBP	1415987_at 1415988_at 1419806_at 1419869_s_at 1443546_at 1449615_s_at	2181	0.662	0.0359	No
10	ST7	1418967_a_at	2223	0.650	0.0407	No
11	MIB1	1433853_at 1446818_at 1451818_at 1454740_at	2286	0.633	0.0443	No
12	ANP32A	1421918_at 1434555_at 1450407_a_at	2401	0.606	0.0454	No
13	PTK7	1452589_at	2687	0.536	0.0378	No
14	CCNG1	1420827_a_at 1450016_at 1450017_at	2756	0.525	0.0401	No
15	DGCR8	1422981_at 1435439_at 1446169_at 1455311_at	2843	0.510	0.0414	No
16	SMARCD1	1448913_at	2971	0.489	0.0406	No
17	PTMA	1423455_at	3142	0.463	0.0375	No
18	PPM1E	1434990_at 1445741_at	3329	0.438	0.0335	No
19	SH3BP4	1416305_at 1455250_at	3405	0.429	0.0345	No
20	HPN	1420712_a_at	3437	0.425	0.0374	No
21	LRFN5	1441502_at 1454687_at	3472	0.419	0.0402	No
22	MN1	1454867_at	4092	0.358	0.0154	No
23	OSR2	1426155_a_at 1430950_at	4325	0.336	0.0082	No
24	PHF15	1430081_at 1455345_at	4596	0.317	-0.0009	No
25	NTF5	1440353_at	4616	0.316	0.0015	No
26	DBN1	1426024_a_at 1451734_a_at	4619	0.315	0.0046	No
27	EPHB1	1455188_at	5255	0.275	-0.0217	No
28	TFEB	1422566_at	5377	0.267	-0.0245	No
29	KCNAB3	1421790_a_at 1423950_at	5398	0.265	-0.0227	No
30	KCNQ4	1435721_at 1442909_at	5416	0.264	-0.0208	No
31	NR2E1	1434921_at 1457289_at	5603	0.252	-0.0267	No
32	APLP1	1416134_at 1435857_s_at	5606	0.252	-0.0242	No
33	PIP5K2B	1427438_at 1435068_at 1441164_at 1444128_at	5740	0.244	-0.0278	No
34	OAZ2	1426763_at 1426764_at 1442541_at 1442735_at	5873	0.237	-0.0315	No
35	TLK2	1416944_a_at 1431827_a_at 1454018_at 1457357_at	6311	0.214	-0.0493	No
36	RASIP1	1428016_a_at	6582	0.201	-0.0597	No
37	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	6599	0.200	-0.0584	No
38	CPEB3	1437765_at 1445868_at 1455372_at 1456048_at	6935	0.185	-0.0718	No
39	PLCB3	1448661_at	7047	0.180	-0.0751	No
40	PPP2R5A	1423911_at 1440189_at 1444036_at	7081	0.179	-0.0748	No
41	PORCN	1424220_a_at 1438753_at	7363	0.165	-0.0860	No
42	DMPK	1422989_a_at 1434944_at	7973	0.141	-0.1125	No
43	FKBP14	1433481_at 1458225_at	8103	0.137	-0.1171	No
44	CLDN5	1417839_at	8223	0.132	-0.1212	No
45	KCNH5	1441742_at	8271	0.131	-0.1220	No
46	LHX2	1418317_at	8457	0.123	-0.1292	No
47	TRIM28	1415869_a_at 1456308_x_at	8476	0.123	-0.1288	No
48	HEY1	1415999_at	8546	0.120	-0.1307	No
49	PAQR4	1423101_at	8890	0.108	-0.1454	No
50	ASCL1	1437086_at 1450164_at	8903	0.108	-0.1448	No
51	GP1BB	1422977_at 1456427_at	9089	0.101	-0.1523	No
52	C1ORF24	1422567_at 1454942_at	9348	0.092	-0.1632	No
53	ANGPTL2	1421002_at 1431848_at	9354	0.092	-0.1624	No
54	ADIPOR1	1424312_at 1439017_x_at 1451311_a_at	9491	0.087	-0.1678	No
55	COL12A1	1427391_a_at 1445751_at	9516	0.087	-0.1680	No
56	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	9535	0.086	-0.1679	No
57	SALL1	1450489_at	9742	0.080	-0.1766	No
58	SFRS16	1428961_a_at	10078	0.068	-0.1913	No
59	PRDM16	1429308_at 1429309_at 1440745_at 1440870_at 1443251_at	10329	0.060	-0.2022	No
60	EYA1	1421727_at 1443117_at 1457424_at	10434	0.056	-0.2064	No
61	GPR3	1460275_at	10445	0.056	-0.2063	No
62	SLC7A10	1421093_at	10457	0.055	-0.2062	No
63	DTNB	1437651_a_at 1445329_at 1446012_at	10794	0.044	-0.2212	No
64	FGF9	1420795_at 1438718_at 1445258_at	10862	0.041	-0.2238	No
65	CEECAM1	1435345_at	10878	0.041	-0.2241	No
66	PGF	1418471_at	10941	0.039	-0.2266	No
67	ADAMTS5	1422561_at 1450658_at 1456404_at	10985	0.037	-0.2282	No
68	SOX2	1416967_at	11017	0.036	-0.2292	No
69	KCNJ12	1422871_at	11133	0.033	-0.2342	No
70	MGAT2	1426350_at 1452037_at	11171	0.031	-0.2355	No
71	PDGFB	1450413_at 1450414_at	11257	0.028	-0.2391	No
72	CHD4	1436343_at 1438476_a_at 1451295_a_at	11261	0.028	-0.2390	No
73	SLC17A7	1428986_at	12170	-0.003	-0.2807	No
74	GPR12	1449472_at 1457702_at	12192	-0.003	-0.2816	No
75	RHBDF1	1424138_at	12486	-0.015	-0.2950	No
76	SLC6A11	1433989_at 1453871_at	12524	-0.017	-0.2965	No
77	HOXB9	1452317_at	12525	-0.017	-0.2963	No
78	FMNL1	1445636_at 1450212_at	12530	-0.017	-0.2963	No
79	EGR3	1421486_at 1436329_at	12603	-0.020	-0.2994	No
80	FGD1	1416865_at 1437369_at 1459278_at	12638	-0.020	-0.3008	No
81	STMN1	1415849_s_at	12666	-0.021	-0.3018	No
82	EFNB3	1423085_at	12840	-0.028	-0.3095	No
83	BTBD14B	1420968_at 1420969_at 1433139_at 1433140_a_at 1443382_s_at 1458200_at	13016	-0.035	-0.3172	No
84	FOXA3	1431900_a_at	13245	-0.042	-0.3272	No
85	MAFB	1451715_at 1451716_at	13491	-0.053	-0.3379	No
86	CENTG2	1435432_at 1435433_at 1437394_at 1442632_at 1457978_at 1459053_at 1459389_at	13503	-0.053	-0.3379	No
87	ACCN1	1417994_a_at	13520	-0.054	-0.3381	No
88	CXXC5	1431469_a_at 1448960_at	13590	-0.056	-0.3407	No
89	ARID1A	1447104_at	13684	-0.059	-0.3443	No
90	CPSF4	1424469_a_at	13789	-0.064	-0.3485	No
91	ITPKA	1424037_at	13970	-0.071	-0.3560	No
92	FXYD1	1421374_a_at	14152	-0.079	-0.3635	No
93	GNG8	1457755_at	14169	-0.080	-0.3634	No
94	IL11	1449982_at	14516	-0.095	-0.3783	No
95	HOXA1	1420565_at	14533	-0.096	-0.3781	No
96	CELSR2	1422073_a_at 1435336_at	14780	-0.107	-0.3883	No
97	SLC18A3	1422203_at	15101	-0.121	-0.4018	No
98	ADRB1	1423420_at	15301	-0.131	-0.4095	No
99	ACVR2B	1419140_at 1439856_at	15308	-0.132	-0.4085	No
100	FASTK	1460635_at	15331	-0.132	-0.4081	No
101	SYT7	1423012_at 1441927_at 1446641_at 1460081_at	15371	-0.135	-0.4085	No
102	TMEM25	1436644_x_at 1452962_at	15603	-0.147	-0.4176	No
103	PABPC1	1418883_a_at 1419500_at 1453840_at	15692	-0.152	-0.4201	No
104	CYB561D1	1431021_at 1434226_at 1459837_at	15725	-0.155	-0.4200	No
105	RDH10	1426968_a_at 1460632_at	15759	-0.156	-0.4199	No
106	FGF11	1421793_at 1439959_at	15905	-0.164	-0.4248	No
107	MGAT4B	1424720_at	16191	-0.182	-0.4361	No
108	WNT5A	1436791_at 1448818_at 1456976_at	16676	-0.215	-0.4561	No
109	KCNH8	1440980_at 1459015_at	16743	-0.220	-0.4569	No
110	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	16778	-0.222	-0.4562	No
111	BCOR	1428773_s_at 1429438_at 1452910_at	16824	-0.226	-0.4559	No
112	CHAT	1440070_at	17025	-0.241	-0.4626	No
113	HOXB2	1444204_at 1449397_at	17116	-0.249	-0.4642	No
114	POU5F1	1417945_at	17123	-0.250	-0.4619	No
115	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	17373	-0.271	-0.4705	No
116	MESDC1	1416397_at 1416398_at	17444	-0.277	-0.4709	No
117	NCOA6IP	1421904_at 1421905_at 1439710_at 1446164_at 1450400_at 1450401_at	17462	-0.279	-0.4688	No
118	VEGF	1420909_at 1451959_a_at	17478	-0.280	-0.4666	No
119	NXPH3	1419710_at	17650	-0.299	-0.4714	Yes
120	SYMPK	1428673_at	17681	-0.302	-0.4696	Yes
121	GLTP	1419027_s_at	17692	-0.303	-0.4670	Yes
122	KCNK3	1425341_at 1425342_a_at 1426058_a_at	17775	-0.313	-0.4675	Yes
123	RAB35	1433922_at	17900	-0.327	-0.4698	Yes
124	SPATA6	1418650_at 1418651_at 1438023_at 1445355_at	17931	-0.330	-0.4678	Yes
125	RAD21	1416161_at 1416162_at 1455938_x_at	17948	-0.333	-0.4651	Yes
126	CTCF	1418330_at 1449042_at	17993	-0.339	-0.4636	Yes
127	SLC25A28	1424776_a_at	18006	-0.341	-0.4607	Yes
128	TERF2	1421147_at 1455651_at 1459650_at	18040	-0.345	-0.4586	Yes
129	LDB1	1452024_a_at	18101	-0.351	-0.4578	Yes
130	FBXL11	1435329_at 1443336_at 1444358_at 1455942_at 1458449_at	18209	-0.367	-0.4589	Yes
131	NFYC	1448963_at	18242	-0.372	-0.4565	Yes
132	CDK9	1417269_at 1457240_at	18362	-0.391	-0.4580	Yes
133	SPRED1	1423160_at 1423161_s_at 1423162_s_at 1428777_at 1441517_at 1442859_at 1443652_x_at 1445228_at 1452911_at 1460116_s_at	18396	-0.396	-0.4554	Yes
134	TRIM39	1418851_at	18459	-0.408	-0.4540	Yes
135	UBTF	1453097_a_at 1455490_at 1460304_a_at	18548	-0.421	-0.4538	Yes
136	MAP3K7IP2	1423462_at 1451003_at	18648	-0.438	-0.4538	Yes
137	CGREF1	1424528_at 1424529_s_at	18735	-0.455	-0.4530	Yes
138	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	18895	-0.486	-0.4553	Yes
139	DLGAP4	1426465_at 1455548_at	18908	-0.490	-0.4508	Yes
140	SLC37A4	1417042_at	18911	-0.490	-0.4459	Yes
141	POFUT1	1443881_at 1450137_at 1456323_at	19190	-0.547	-0.4530	Yes
142	CNNM4	1421635_at 1431233_at	19267	-0.563	-0.4507	Yes
143	MKNK2	1418300_a_at 1449029_at	19280	-0.565	-0.4454	Yes
144	ATP5H	1423676_at 1435112_a_at	19386	-0.587	-0.4442	Yes
145	MGEA5	1422900_at 1422901_at 1422902_s_at 1433654_at 1439081_at	19613	-0.644	-0.4480	Yes
146	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	19735	-0.676	-0.4465	Yes
147	SLC12A4	1417446_at	19748	-0.680	-0.4401	Yes
148	CRSP7	1452282_at 1458377_at	19772	-0.686	-0.4341	Yes
149	BAHD1	1433703_s_at	19798	-0.694	-0.4281	Yes
150	TACC2	1425745_a_at 1447891_at	19820	-0.704	-0.4218	Yes
151	CENTD2	1428064_at	19891	-0.723	-0.4175	Yes
152	PSCD2	1450103_a_at	19938	-0.741	-0.4120	Yes
153	NCOA6	1423374_at	20070	-0.782	-0.4099	Yes
154	SIPA1	1416206_at	20083	-0.792	-0.4023	Yes
155	FBS1	1425276_at 1451645_at	20109	-0.798	-0.3952	Yes
156	MYH10	1441057_at 1452740_at	20198	-0.835	-0.3907	Yes
157	CAMTA2	1426901_s_at 1452229_at	20262	-0.864	-0.3847	Yes
158	PCTK1	1415956_a_at 1438314_at 1443296_at 1460169_a_at	20335	-0.899	-0.3787	Yes
159	KLF13	1432543_a_at 1456030_at	20380	-0.917	-0.3713	Yes
160	PHF1	1416542_at	20401	-0.926	-0.3626	Yes
161	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	20492	-0.971	-0.3568	Yes
162	RNF40	1438191_a_at	20526	-0.991	-0.3480	Yes
163	NCOA2	1435233_at 1435234_at 1446827_at 1450458_at	20598	-1.039	-0.3406	Yes
164	BCAT2	1425764_a_at	20627	-1.063	-0.3309	Yes
165	UBE2S	1416726_s_at 1430962_at	20738	-1.150	-0.3241	Yes
166	GRK6	1437436_s_at 1450480_a_at 1451672_at	20772	-1.176	-0.3135	Yes
167	CNP	1418980_a_at 1437341_x_at 1449296_a_at	20822	-1.206	-0.3033	Yes
168	RFX1	1422109_at 1436059_at	20824	-1.207	-0.2909	Yes
169	ZNRF2	1431154_at 1434016_at 1434017_at 1444735_at 1455290_at 1455291_s_at	20825	-1.208	-0.2785	Yes
170	CIC	1415746_at	20862	-1.228	-0.2674	Yes
171	CRY1	1433733_a_at	20923	-1.282	-0.2570	Yes
172	MLL5	1427236_a_at 1432601_at 1434704_at 1439107_a_at 1439108_at	20986	-1.338	-0.2460	Yes
173	PFKFB3	1416432_at 1419882_at 1456676_a_at	21113	-1.474	-0.2366	Yes
174	FNBP1	1426983_at 1451806_at 1453746_at 1458639_at 1460047_at	21218	-1.590	-0.2250	Yes
175	PIAS1	1422581_at 1446448_at 1455486_at 1455611_at	21219	-1.590	-0.2086	Yes
176	B4GALT1	1418014_a_at 1458616_at 1458773_at	21244	-1.617	-0.1930	Yes
177	RASGRP2	1417804_at 1438932_at 1438933_x_at 1442264_at 1449613_at	21266	-1.647	-0.1770	Yes
178	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	21400	-1.863	-0.1639	Yes
179	KCNH2	1449544_a_at	21520	-2.088	-0.1478	Yes
180	JMJD1B	1428320_at 1438508_at 1458417_at	21585	-2.244	-0.1276	Yes
181	NRF1	1420978_at 1424787_a_at 1434627_at 1439545_at 1445914_at	21627	-2.339	-0.1054	Yes
182	SMAD7	1423389_at 1440952_at 1443771_x_at	21640	-2.367	-0.0815	Yes
183	RBM6	1417213_a_at 1440223_at 1452466_a_at 1458912_at	21719	-2.680	-0.0575	Yes
184	BCL6	1421818_at 1450381_a_at	21792	-3.059	-0.0293	Yes
185	KIF3C	1434947_at 1448946_at	21843	-3.465	0.0042	Yes