Details for gene set RRAGTTGT

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	RRAGTTGT_UNKNOWN
Enrichment Score (ES)	-0.45778722
Normalized Enrichment Score (NES)	-1.562429
Nominal p-value	0.0034722222
FDR q-value	0.1442723
FWER p-Value	0.691

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NR4A3	1421079_at 1421080_at	228	2.289	0.0142	No
2	GRID2	1421435_at 1421436_at 1435487_at 1437824_at 1443101_at 1446879_at 1458756_at 1459245_s_at	434	1.757	0.0238	No
3	ETV1	1422607_at 1445314_at 1450684_at	882	1.267	0.0169	No
4	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	1058	1.143	0.0212	No
5	CCDC5	1424955_at	1143	1.087	0.0290	No
6	EDIL3	1425622_at 1425842_at 1433474_at 1440674_at 1446573_at 1458867_at	1150	1.082	0.0404	No
7	RPS6KA3	1427299_at 1441360_at 1452383_at	1400	0.940	0.0391	No
8	BRUNOL4	1426929_at 1426930_at 1452240_at 1458475_at	1403	0.939	0.0492	No
9	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	1599	0.855	0.0495	No
10	RPL7	1415979_x_at 1426162_a_at 1426163_x_at 1427452_at	1713	0.807	0.0530	No
11	CALR3	1431255_at 1453232_at 1453233_s_at	2042	0.702	0.0455	No
12	ITSN1	1421192_a_at 1425899_a_at 1435884_at 1435885_s_at 1440637_at 1441034_at 1442637_at 1452338_s_at 1459621_at	2082	0.688	0.0511	No
13	MRPL50	1424164_at 1451266_at	2107	0.681	0.0573	No
14	NR2F1	1418157_at 1422412_x_at	2159	0.668	0.0622	No
15	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	2192	0.659	0.0679	No
16	SESN3	1449303_at 1453313_at	2323	0.624	0.0686	No
17	MSX2	1438351_at 1449559_at	2671	0.539	0.0585	No
18	LRCH2	1436877_at 1441273_at	2809	0.517	0.0578	No
19	SOX11	1429051_s_at 1429372_at 1431225_at 1436790_a_at 1453002_at 1453125_at	2813	0.516	0.0632	No
20	DHX30	1416140_a_at 1438832_x_at 1438969_x_at 1453251_at	2871	0.506	0.0660	No
21	ACP6	1444410_at 1448445_at	3068	0.474	0.0621	No
22	TCF8	1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at	3201	0.456	0.0610	No
23	SMAD5	1421047_at 1433641_at 1451873_a_at	3299	0.442	0.0613	No
24	RELN	1449465_at 1458020_at	3338	0.436	0.0643	No
25	MXD4	1422574_at 1434378_a_at 1434379_at	3474	0.419	0.0626	No
26	NTF3	1434802_s_at 1450803_at	3714	0.390	0.0558	No
27	AGA	1434665_at	3911	0.372	0.0508	No
28	ZIC4	1421539_at 1456417_at	4089	0.358	0.0465	No
29	HOXA5	1443803_x_at 1448926_at	4410	0.331	0.0354	No
30	RFC1	1418342_at 1449050_at 1451920_a_at	4500	0.325	0.0348	No
31	PHF15	1430081_at 1455345_at	4596	0.317	0.0339	No
32	CSMD3	1438272_at 1438572_at 1454245_at	4613	0.316	0.0366	No
33	HOXD3	1421537_at 1437664_at	4723	0.308	0.0349	No
34	SLC24A3	1424308_at 1442184_at 1458900_at	5080	0.286	0.0216	No
35	PTPRG	1447906_at 1450122_at	5199	0.278	0.0192	No
36	KCNQ4	1435721_at 1442909_at	5416	0.264	0.0121	No
37	SMARCA2	1430526_a_at 1439930_at 1452333_at	5737	0.245	0.0000	No
38	NKX2-2	1421112_at	5764	0.242	0.0015	No
39	PRICKLE2	1428808_at	5890	0.235	-0.0017	No
40	SCRT2	1440930_a_at 1440931_at 1446986_at 1457310_x_at	5915	0.234	-0.0003	No
41	RAB30	1426452_a_at	6043	0.227	-0.0037	No
42	RCN3	1424382_at	6084	0.225	-0.0031	No
43	MOAP1	1431823_at 1448787_at	6169	0.221	-0.0046	No
44	ATP5O	1416278_a_at	6318	0.214	-0.0091	No
45	TCF4	1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at	6338	0.213	-0.0077	No
46	TFPT	1418064_at 1438963_s_at 1438964_x_at 1448040_at	6543	0.203	-0.0148	No
47	ACCN2	1455328_at	7264	0.170	-0.0461	No
48	ARRDC3	1454617_at	7333	0.167	-0.0474	No
49	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	7501	0.160	-0.0534	No
50	MOSPD1	1424280_at	7859	0.146	-0.0682	No
51	POLK	1419501_at 1449483_at	7889	0.145	-0.0680	No
52	LUC7L	1428255_at 1431181_a_at 1431664_at 1452708_a_at	7957	0.142	-0.0695	No
53	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	8070	0.137	-0.0732	No
54	TNFSF4	1421744_at	8251	0.131	-0.0800	No
55	ZDHHC14	1423668_at 1437614_x_at 1437616_x_at 1438151_x_at 1438619_x_at 1438975_x_at	8397	0.125	-0.0854	No
56	SLITRK5	1429718_at	8412	0.125	-0.0846	No
57	RIMS1	1435667_at 1438305_at 1444393_at	8514	0.121	-0.0880	No
58	CREB5	1440089_at 1442576_at 1457222_at	8760	0.113	-0.0980	No
59	PLXNA2	1429772_at 1446420_at 1451753_at 1453286_at 1455037_at 1458102_at 1459033_at	8769	0.113	-0.0972	No
60	INVS	1419308_at 1444709_at 1460491_at	8778	0.113	-0.0963	No
61	DAAM2	1430247_at 1455717_s_at	8820	0.111	-0.0970	No
62	FOXD3	1422210_at	8848	0.110	-0.0971	No
63	EPS15	1419251_at 1430152_at 1440729_at	8944	0.106	-0.1003	No
64	GSH1	1450002_at	8977	0.105	-0.1006	No
65	ITGA1	1439713_at 1446569_at 1455251_at	9005	0.104	-0.1007	No
66	LGI1	1423183_at 1435851_at	9055	0.102	-0.1019	No
67	CBX7	1420039_s_at 1433557_at 1449713_at	9170	0.099	-0.1061	No
68	KLF4	1417394_at 1417395_at	9183	0.098	-0.1056	No
69	RPL31	1420381_a_at 1459330_at	9211	0.097	-0.1058	No
70	GHR	1417962_s_at 1451501_a_at 1451871_a_at 1458832_at 1459948_at	9328	0.093	-0.1101	No
71	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	9353	0.092	-0.1102	No
72	PTPRK	1423277_at 1423278_at 1431680_a_at 1441276_at 1441277_s_at 1441644_at 1443491_at 1443699_at 1444763_at	9578	0.085	-0.1196	No
73	NCALD	1417568_at 1417569_at 1439730_at 1444466_at 1458037_at	10034	0.069	-0.1397	No
74	SPAG9	1430556_at 1433648_at 1437676_at	10218	0.063	-0.1475	No
75	UTY	1422247_a_at 1426598_at 1442153_at 1445265_at 1457582_at 1459565_at	10483	0.054	-0.1590	No
76	CNTNAP2	1422798_at 1437782_at 1450758_at	10542	0.052	-0.1611	No
77	LIF	1421206_at 1421207_at 1450160_at	10555	0.052	-0.1611	No
78	SOX2	1416967_at	11017	0.036	-0.1819	No
79	SOSTDC1	1449340_at 1460250_at	11072	0.035	-0.1840	No
80	ATP5G3	1454661_at	11289	0.027	-0.1936	No
81	HEBP1	1418172_at 1457903_at	11326	0.026	-0.1950	No
82	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	11490	0.021	-0.2023	No
83	BTBD3	1425660_at 1433868_at 1442748_at	11518	0.020	-0.2033	No
84	UTX	1427235_at 1427672_a_at 1440524_at 1441201_at 1445198_at 1446234_at 1446278_at	11547	0.019	-0.2044	No
85	LEF1	1421299_a_at 1436398_at 1440760_at	11557	0.019	-0.2046	No
86	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	11763	0.011	-0.2139	No
87	HOXA11	1420414_at	11888	0.007	-0.2195	No
88	PKHD1L1	1421696_at	11912	0.006	-0.2205	No
89	TLL2	1421526_at	11940	0.005	-0.2217	No
90	CCL24	1450488_at	12160	-0.002	-0.2317	No
91	CRTAC1	1426606_at 1452936_at 1457474_at 1459858_x_at	12249	-0.005	-0.2357	No
92	BCKDK	1443813_x_at 1460644_at	12298	-0.007	-0.2378	No
93	WNT10A	1460657_at	12633	-0.020	-0.2530	No
94	DAB1	1421100_a_at 1427307_a_at 1427308_at 1435577_at 1435578_s_at	12827	-0.027	-0.2615	No
95	ZBTB8	1455193_at	12904	-0.030	-0.2647	No
96	NRAS	1422688_a_at 1454060_a_at	12913	-0.030	-0.2647	No
97	HOXB6	1451660_a_at	13142	-0.039	-0.2748	No
98	GABRA3	1421263_at	13324	-0.046	-0.2826	No
99	PLS3	1423725_at	13511	-0.053	-0.2906	No
100	GABRA1	1421280_at 1421281_at 1436889_at 1455766_at	13587	-0.056	-0.2934	No
101	CXXC5	1431469_a_at 1448960_at	13590	-0.056	-0.2929	No
102	NAP1L5	1417411_at	13691	-0.060	-0.2969	No
103	ATRN	1421166_at 1432645_at 1434197_at	13723	-0.061	-0.2977	No
104	ZDHHC22	1459723_at	13730	-0.061	-0.2973	No
105	LRRC1	1452411_at	13778	-0.063	-0.2987	No
106	APP	1420621_a_at 1427442_a_at 1438373_at 1438374_x_at 1444705_at 1447347_at 1458525_at	13857	-0.067	-0.3016	No
107	APBA1	1437940_at 1455369_at 1459605_at	13864	-0.067	-0.3012	No
108	KLF5	1430255_at 1451021_a_at 1451739_at	14182	-0.081	-0.3149	No
109	ARHGEF11	1443539_at 1446904_at 1457188_at	14399	-0.090	-0.3238	No
110	ECT2	1419513_a_at	14564	-0.097	-0.3303	No
111	ESPL1	1433862_at	14648	-0.102	-0.3330	No
112	HOXD10	1418606_at	14688	-0.103	-0.3337	No
113	DPYSL3	1415877_at 1438789_s_at 1454613_at	14741	-0.105	-0.3349	No
114	IPO7	1442511_at 1454955_at 1458165_at	15307	-0.132	-0.3595	No
115	UBXD3	1426007_a_at 1451906_at 1456385_x_at 1457581_at	15491	-0.141	-0.3664	No
116	ATP5A1	1420037_at 1423111_at 1449710_s_at	15591	-0.146	-0.3693	No
117	GAS7	1417859_at 1431400_a_at 1445685_at	15618	-0.148	-0.3689	No
118	SCOC	1416267_at 1430999_a_at	15671	-0.151	-0.3697	No
119	RDH10	1426968_a_at 1460632_at	15759	-0.156	-0.3720	No
120	LHX1	1421951_at 1450428_at	15767	-0.157	-0.3706	No
121	FEN1	1421731_a_at 1436454_x_at	16014	-0.171	-0.3801	No
122	SNX1	1416260_a_at	16083	-0.176	-0.3813	No
123	ERBB2	1424919_at	16091	-0.176	-0.3797	No
124	NR5A2	1420410_at 1449706_s_at 1449707_at	16566	-0.207	-0.3993	No
125	BMP4	1422912_at	16584	-0.208	-0.3978	No
126	JAM3	1423503_at 1423504_at 1444895_at	16835	-0.226	-0.4069	No
127	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	16926	-0.233	-0.4085	No
128	CRYZL1	1430546_at 1430547_s_at 1440045_at 1442574_at 1451473_a_at	17261	-0.261	-0.4210	No
129	PRPF31	1448633_at 1453005_at 1457083_at	17330	-0.267	-0.4213	No
130	BBX	1422741_a_at 1425835_a_at 1430820_a_at 1458602_at	17345	-0.269	-0.4190	No
131	BICD1	1427530_at 1437548_at 1438701_at 1451684_a_at	17455	-0.278	-0.4210	No
132	FOXP3	1420765_a_at 1457082_at	17531	-0.286	-0.4214	No
133	ORMDL3	1419450_at	17882	-0.325	-0.4340	No
134	USF1	1426164_a_at 1448805_at 1459758_at	18096	-0.351	-0.4400	No
135	TOP3A	1418597_at	18179	-0.362	-0.4398	No
136	TAF5L	1448195_at	18500	-0.413	-0.4501	No
137	HHIP	1421426_at 1437933_at 1438083_at 1455277_at	18544	-0.420	-0.4475	No
138	SNX27	1430037_at 1433614_at	18617	-0.432	-0.4462	No
139	ZBTB26	1434629_at 1447721_at	18618	-0.432	-0.4415	No
140	PELO	1434071_a_at	18761	-0.459	-0.4431	No
141	OSCAR	1425442_at 1451710_at	18918	-0.491	-0.4449	No
142	BCL11B	1440137_at 1441762_at 1450339_a_at	18928	-0.493	-0.4400	No
143	FUT11	1431066_at 1434123_at 1437748_at	18951	-0.498	-0.4357	No
144	PDE6D	1416843_at	19334	-0.575	-0.4470	No
145	ARID1B	1439321_at 1455979_at 1456952_at	19559	-0.629	-0.4505	Yes
146	GRWD1	1436887_x_at 1452171_at 1455841_s_at	19651	-0.650	-0.4477	Yes
147	ATP1B2	1422009_at 1435148_at	19708	-0.668	-0.4430	Yes
148	BAHD1	1433703_s_at	19798	-0.694	-0.4396	Yes
149	SMCR8	1429017_at 1437701_at	19830	-0.708	-0.4334	Yes
150	TMOD3	1423088_at 1423089_at 1438556_a_at 1439626_at 1455708_at 1456913_at	20361	-0.908	-0.4480	Yes
151	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	20492	-0.971	-0.4435	Yes
152	PANK3	1426259_at	20605	-1.042	-0.4374	Yes
153	SLC9A9	1433719_at 1437488_at 1447149_at	20608	-1.044	-0.4262	Yes
154	MSI2	1421230_a_at 1421231_at 1435520_at 1435521_at 1436818_a_at 1441185_at 1441373_at 1443008_at 1443530_at 1446022_at 1458136_at 1458542_at	20674	-1.103	-0.4173	Yes
155	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20709	-1.130	-0.4067	Yes
156	RERE	1454670_at	20719	-1.135	-0.3948	Yes
157	CNR1	1419425_at 1434172_at	20972	-1.322	-0.3921	Yes
158	ZBTB9	1429125_at	20990	-1.343	-0.3784	Yes
159	BDNF	1422168_a_at 1422169_a_at	21006	-1.362	-0.3644	Yes
160	PIK3R1	1425514_at 1425515_at 1438682_at 1444591_at 1451737_at	21161	-1.529	-0.3550	Yes
161	COL4A3BP	1420383_a_at 1420384_at 1449847_a_at 1452867_at	21166	-1.529	-0.3387	Yes
162	ERO1LB	1425705_a_at 1434714_at 1449948_at	21177	-1.547	-0.3225	Yes
163	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	21196	-1.570	-0.3064	Yes
164	PIAS1	1422581_at 1446448_at 1455486_at 1455611_at	21219	-1.590	-0.2902	Yes
165	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	21259	-1.639	-0.2743	Yes
166	OSBPL9	1423383_a_at 1438614_x_at 1439283_at 1445627_at 1450964_a_at	21541	-2.144	-0.2641	Yes
167	RASSF2	1428392_at 1444889_at	21601	-2.281	-0.2422	Yes
168	RAB2	1418621_at 1418622_at 1418623_at 1419945_s_at 1419946_s_at 1436477_x_at 1449676_at	21767	-2.900	-0.2185	Yes
169	SLC31A2	1416654_at 1453721_a_at 1459399_at	21776	-2.936	-0.1872	Yes
170	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	21855	-3.600	-0.1519	Yes
171	CBFB	1442617_at 1460716_a_at	21870	-3.741	-0.1122	Yes
172	RRM1	1415878_at 1440073_at 1448127_at	21885	-4.048	-0.0692	Yes
173	NDUFA3	1428464_at 1430149_at 1452790_x_at	21930	-6.615	0.0002	Yes