DatasetSet_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls
#ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls
#ATM_minus_versus_BT_ATM_minus_repos
Phenotypephenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in classBT_ATM_minus
GeneSetCCAWWNAAGG_V$SRF_Q4
Enrichment Score (ES)-0.59890324
Normalized Enrichment Score (NES)-1.7836648
Nominal p-value0.0
FDR q-value0.07283577
FWER p-Value0.053
Table: GSEA Results Summary



Fig 1: Enrichment plot: CCAWWNAAGG_V$SRF_Q4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKM1417614_at4061.8060.0245No
2H3F3A1423263_at 1442087_at16200.848-0.0107No
3FOSB1422134_at28110.516-0.0528No
4KCTD151435339_at32890.443-0.0640No
5SVIL1427662_at 1460694_s_at 1460735_at36660.396-0.0718No
6DEFB1291440957_at37890.384-0.0682No
7EPHB11455188_at52550.275-0.1286No
8TRDN1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at53130.271-0.1247No
9NKX2-21421112_at57640.242-0.1395No
10PRDM11420425_at 1444997_at60090.229-0.1452No
11RAB301426452_a_at60430.227-0.1413No
12INSM11421399_at 1455865_at61950.219-0.1430No
13MRVI11422245_a_at 1459665_s_at62680.216-0.1411No
14TCF41416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at63380.213-0.1392No
15VIT1426231_at69740.183-0.1639No
16PLCB31448661_at70470.180-0.1629No
17MAPKAPK21426648_at71230.176-0.1621No
18HOXD131422239_at 1440626_at71510.175-0.1591No
19SFRS121427134_at 1427135_at 1427136_s_at 1458056_at80700.137-0.1978No
20MYL71449071_at83430.128-0.2072No
21RARB1454906_at83660.127-0.2052No
22TAGLN1423505_at84360.124-0.2054No
23NKX6-11425828_at88820.109-0.2232No
24CALD11424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at89070.108-0.2217No
25DIXDC11425256_a_at 1435207_at 1443957_at 1444395_at92290.096-0.2341No
26NPAS21421036_at 1421037_at92360.096-0.2321No
27SRF1418255_s_at 1418256_at94700.088-0.2406No
28SCN3B1426328_a_at 1435767_at94750.088-0.2387No
29NPPA1456062_at98430.076-0.2537No
30PLN1423359_at 1450952_at 1460332_at103880.058-0.2772No
31ERBB2IP1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at117570.012-0.3394No
32TNNC11418370_at12393-0.011-0.3682No
33TITF11422346_at13256-0.043-0.4066No
34SP71418425_at13549-0.055-0.4187No
35ATRX1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at13696-0.060-0.4239No
36TPM21419738_a_at 1419739_at 1425028_a_at 1449577_x_at14054-0.075-0.4385No
37CORO1C1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at14088-0.077-0.4381No
38SDPR1416778_at 1416779_at 1443832_s_at14422-0.091-0.4512No
39PODN1435180_at14424-0.091-0.4491No
40HOXC51439885_at 1450832_at 1456301_at14590-0.099-0.4543No
41HOXD101418606_at14688-0.103-0.4562No
42MYH111418122_at 1448962_at14699-0.104-0.4542No
43MRGPRF1425894_at15443-0.139-0.4849No
44SCOC1416267_at 1430999_a_at15671-0.151-0.4917No
45FGFRL11447878_s_at 1451912_a_at17642-0.298-0.5746No
46KCNK31425341_at 1425342_a_at 1426058_a_at17775-0.313-0.5732No
47DAPK31423446_at 1456496_at17980-0.337-0.5745No
48PPP1R12A1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at18017-0.342-0.5679No
49UBE2C1452954_at18103-0.351-0.5634No
50PFN11449018_at18512-0.415-0.5722No
51MYLK1425504_at 1425505_at 1425506_at18845-0.476-0.5760No
52PICALM1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at18895-0.486-0.5667No
53PHF121434922_at 1453579_at19601-0.641-0.5836Yes
54ACTG21422340_a_at19669-0.656-0.5710Yes
55ACTA11427735_a_at19700-0.666-0.5565Yes
56RUNDC11454829_at19983-0.757-0.5513Yes
57FLNA1426677_at19992-0.758-0.5335Yes
58CSRP11425810_a_at 1425811_a_at20266-0.867-0.5253Yes
59CFL21418066_at 1418067_at 1431432_at20311-0.887-0.5062Yes
60DUSP21450698_at20488-0.970-0.4910Yes
61NR4A11416505_at20684-1.112-0.4734Yes
62DUSP51437199_at21110-1.471-0.4577Yes
63PCDH71427592_at 1437442_at 1449249_at 1456214_at21196-1.570-0.4241Yes
64EGR11417065_at21457-1.965-0.3891Yes
65RASSF21428392_at 1444889_at21601-2.281-0.3412Yes
66EGR21427682_a_at 1427683_at21692-2.582-0.2836Yes
67ANP32E1420592_a_at 1447680_at21742-2.774-0.2197Yes
68LSP11417756_a_at21755-2.829-0.1527Yes
69ACTB1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at21800-3.133-0.0799Yes
70MBNL11416904_at 1439686_at 1440315_at 1445106_at 1457924_at21855-3.6000.0036Yes
Table: GSEA details [plain text format]



Fig 2: CCAWWNAAGG_V$SRF_Q4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CCAWWNAAGG_V$SRF_Q4: Random ES distribution   
Gene set null distribution of ES for CCAWWNAAGG_V$SRF_Q4