Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	PENG_RAPAMYCIN_DN
Enrichment Score (ES)	0.52025473
Normalized Enrichment Score (NES)	1.8501748
Nominal p-value	0.0
FDR q-value	0.061592966
FWER p-Value	0.309

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDC25A	1417131_at 1417132_at 1445995_at	47	3.621	0.0224	Yes
2	AATF	1432394_a_at 1439676_at 1441722_at 1447459_at	48	3.600	0.0469	Yes
3	TOMM40	1426118_a_at 1459680_at	54	3.547	0.0707	Yes
4	XPO6	1422759_a_at 1440492_at 1443737_at	72	3.310	0.0924	Yes
5	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	107	2.957	0.1110	Yes
6	IDH3A	1422500_at 1422501_s_at 1432016_a_at 1447701_x_at	122	2.860	0.1297	Yes
7	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	131	2.779	0.1482	Yes
8	TCP1	1442317_at 1448122_at	166	2.596	0.1643	Yes
9	ASNS	1433966_x_at 1451095_at	254	2.164	0.1750	Yes
10	TRIP13	1429294_at 1429295_s_at 1446760_at	263	2.125	0.1891	Yes
11	DDX21	1448270_at 1448271_a_at	273	2.090	0.2028	Yes
12	MYCBP	1421165_at 1427938_at 1427939_s_at 1427940_s_at 1452608_at	309	1.995	0.2148	Yes
13	CYCS	1422484_at 1445484_at	326	1.941	0.2272	Yes
14	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	329	1.939	0.2403	Yes
15	AMD1	1448484_at	333	1.933	0.2533	Yes
16	GORASP2	1424710_a_at 1442825_at 1460460_a_at	426	1.768	0.2611	Yes
17	ETFA	1423972_at	474	1.705	0.2705	Yes
18	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	553	1.594	0.2777	Yes
19	TARS	1460323_at	589	1.555	0.2867	Yes
20	CTSC	1416382_at 1437939_s_at 1446834_at	611	1.525	0.2961	Yes
21	NOL5A	1426533_at 1455035_s_at	627	1.510	0.3056	Yes
22	SLC7A5	1418326_at	640	1.495	0.3152	Yes
23	SLC29A1	1451782_a_at	665	1.477	0.3242	Yes
24	CCT6A	1423517_at 1455988_a_at	667	1.476	0.3342	Yes
25	EIF4G1	1427036_a_at 1427037_at 1438686_at	694	1.445	0.3428	Yes
26	NMT1	1415683_at 1418082_at 1454941_at	696	1.441	0.3525	Yes
27	UBE2L3	1417907_at 1417908_s_at 1448879_at 1448880_at	715	1.422	0.3613	Yes
28	CCT5	1417258_at	726	1.410	0.3704	Yes
29	NARS	1428666_at 1452866_at	760	1.379	0.3783	Yes
30	RARS	1416312_at	763	1.376	0.3875	Yes
31	CTPS	1416563_at	795	1.350	0.3953	Yes
32	SF3A3	1423811_at	859	1.287	0.4011	Yes
33	SRM	1421260_a_at	899	1.250	0.4078	Yes
34	GLO1	1424108_at 1424109_a_at 1436070_at 1451240_a_at	919	1.236	0.4154	Yes
35	ETF1	1420023_at 1420024_s_at 1424013_at 1440629_at 1451208_at	938	1.222	0.4228	Yes
36	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	1058	1.143	0.4251	Yes
37	ATF5	1425927_a_at	1088	1.118	0.4314	Yes
38	NP	1416530_a_at	1148	1.084	0.4360	Yes
39	PRDX3	1416292_at	1155	1.080	0.4431	Yes
40	RTCD1	1424095_at	1159	1.077	0.4503	Yes
41	ATP1B3	1423126_at	1184	1.066	0.4564	Yes
42	ID2	1422537_a_at 1435176_a_at 1453596_at	1196	1.055	0.4631	Yes
43	MORF4L2	1415778_at 1439413_x_at	1208	1.046	0.4697	Yes
44	SSBP1	1427965_at 1430294_at 1444053_at 1452616_s_at 1452617_at	1295	0.995	0.4725	Yes
45	EIF4G2	1415863_at 1452758_s_at	1335	0.969	0.4773	Yes
46	SQLE	1415993_at	1377	0.950	0.4818	Yes
47	CCT2	1416037_a_at 1433534_a_at 1433535_x_at	1443	0.923	0.4851	Yes
48	RAB14	1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at	1516	0.888	0.4878	Yes
49	AK2	1448450_at 1448451_at	1539	0.880	0.4928	Yes
50	HSPA4	1416146_at 1416147_at 1440575_at	1597	0.856	0.4960	Yes
51	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	1599	0.855	0.5017	Yes
52	MRPL12	1452048_at	1670	0.833	0.5042	Yes
53	PSMD5	1423234_at	1750	0.796	0.5060	Yes
54	DNAJA1	1416288_at 1437220_x_at 1445729_at 1459835_s_at 1460179_at	1842	0.762	0.5070	Yes
55	S100A4	1424542_at	1908	0.740	0.5090	Yes
56	TIMM17A	1426256_at	1956	0.726	0.5118	Yes
57	RABGGTB	1419553_a_at	1968	0.723	0.5162	Yes
58	GOT2	1417715_a_at 1417716_at	2043	0.701	0.5175	Yes
59	POLR2B	1433552_a_at	2086	0.687	0.5203	Yes
60	SCD	1415964_at 1415965_at	2414	0.601	0.5093	No
61	NOL1	1424019_at	2433	0.597	0.5125	No
62	EIF3S9	1426674_at	2450	0.592	0.5158	No
63	MARS	1455951_at	2467	0.586	0.5191	No
64	CDK4	1422441_x_at	2637	0.547	0.5150	No
65	GTF2A2	1433528_at	2647	0.544	0.5183	No
66	RNU3IP2	1451293_at	2754	0.525	0.5170	No
67	IFI30	1422476_at	3074	0.473	0.5055	No
68	ARMET	1428112_at 1459455_at	3087	0.471	0.5082	No
69	AHSA1	1424147_at 1444500_at	3317	0.439	0.5007	No
70	P2RX5	1449433_at	3319	0.439	0.5036	No
71	GM2A	1416188_at 1448241_at	3501	0.416	0.4981	No
72	YARS	1460638_at	3532	0.412	0.4995	No
73	SLC3A2	1425364_a_at	3810	0.381	0.4894	No
74	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	3821	0.380	0.4915	No
75	PHB	1435144_at 1442233_at 1448563_at	3870	0.375	0.4918	No
76	NXF1	1416791_a_at	4047	0.362	0.4862	No
77	NDUFS3	1423737_at	4123	0.354	0.4852	No
78	CYC1	1416604_at	4150	0.351	0.4864	No
79	JTB	1424283_at	4234	0.344	0.4849	No
80	HCCS	1420889_at 1420890_at	4436	0.329	0.4779	No
81	CAPZA2	1423057_at 1423058_at	4669	0.312	0.4693	No
82	RNASEH1	1453833_a_at	4727	0.308	0.4688	No
83	HSPE1	1450668_s_at	4864	0.299	0.4646	No
84	CSE1L	1448809_at	5169	0.281	0.4525	No
85	WNT10B	1426091_a_at	5388	0.266	0.4443	No
86	ACVRL1	1435825_at 1451604_a_at	5414	0.264	0.4450	No
87	FASN	1423828_at	5451	0.262	0.4451	No
88	CD47	1419554_at 1428187_at 1430997_at 1449507_a_at 1458634_at 1459908_at	5499	0.259	0.4447	No
89	EBP	1416667_at	5719	0.245	0.4363	No
90	PPIF	1416940_at 1438955_x_at	5743	0.244	0.4369	No
91	ADRM1	1419263_a_at 1438170_x_at	5886	0.236	0.4320	No
92	COPB2	1452102_at 1456175_a_at	5956	0.232	0.4304	No
93	PFKM	1416780_at	6038	0.227	0.4282	No
94	BYSL	1422767_at 1450742_at	6059	0.227	0.4288	No
95	MRPS12	1448799_s_at	6184	0.220	0.4246	No
96	WBSCR22	1423575_a_at	6448	0.207	0.4139	No
97	PSMD8	1423296_at	6511	0.205	0.4125	No
98	PPP2R2A	1429715_at 1437730_at 1453260_a_at	6728	0.193	0.4039	No
99	CHUK	1417091_at 1428210_s_at 1451383_a_at	7004	0.182	0.3925	No
100	POLR2F	1415754_at 1427402_at	7531	0.158	0.3694	No
101	SDHB	1418005_at	7926	0.143	0.3522	No
102	BCAP31	1451049_at 1456279_a_at	8165	0.134	0.3422	No
103	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	8466	0.123	0.3292	No
104	UCHL1	1448260_at	8510	0.122	0.3281	No
105	PPIB	1437649_x_at 1450911_at	8957	0.106	0.3083	No
106	CCNC	1417861_at 1428570_at 1454144_a_at 1454336_at	9029	0.103	0.3058	No
107	SAFB	1432911_at 1454415_at 1454928_at 1454929_s_at	9102	0.101	0.3031	No
108	RPS26	1415876_a_at	9418	0.090	0.2893	No
109	ACAT2	1435630_s_at	10697	0.047	0.2309	No
110	BCS1L	1451541_at	10879	0.041	0.2228	No
111	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	10992	0.037	0.2179	No
112	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	11029	0.036	0.2165	No
113	EMP3	1417104_at	11162	0.032	0.2107	No
114	ATP5G3	1454661_at	11289	0.027	0.2051	No
115	WDR18	1433635_at 1443758_at 1454695_at 1460622_x_at	11414	0.023	0.1995	No
116	PTPN1	1417068_a_at 1438670_at	11559	0.019	0.1930	No
117	BTK	1422755_at	12029	0.002	0.1715	No
118	EIF2B4	1449940_a_at	12095	0.000	0.1685	No
119	RAB1A	1416082_at 1448210_at 1457537_at	12252	-0.005	0.1614	No
120	PTDSS1	1416372_at 1441866_s_at 1449739_at	12346	-0.009	0.1572	No
121	BMP1	1426238_at 1427457_a_at 1427458_at 1446007_at	12571	-0.019	0.1470	No
122	PTRF	1421431_at 1424130_a_at 1453891_at	12601	-0.020	0.1458	No
123	GCDH	1448717_at	12756	-0.024	0.1389	No
124	EIF2B2	1434538_x_at 1437428_x_at 1451136_a_at	12879	-0.029	0.1335	No
125	NME1	1424110_a_at 1435277_x_at	13350	-0.047	0.1122	No
126	MAPKAPK3	1434815_a_at 1437494_at	13379	-0.048	0.1112	No
127	USP10	1448230_at	13420	-0.049	0.1097	No
128	PSMB5	1415676_a_at	13976	-0.072	0.0847	No
129	TUBG1	1417144_at	14357	-0.088	0.0678	No
130	MLF2	1423916_s_at	14395	-0.090	0.0668	No
131	DAP3	1450848_at	14444	-0.092	0.0652	No
132	EBNA1BP2	1428315_at 1437512_x_at 1439898_at 1457668_x_at	15185	-0.126	0.0320	No
133	FKBP4	1416362_a_at 1416363_at 1458729_at 1459808_at	15582	-0.146	0.0148	No
134	EXTL3	1421339_at 1434703_at	15785	-0.157	0.0066	No
135	NDUFA9	1416663_at	16346	-0.192	-0.0178	No
136	MMP15	1422597_at 1437462_x_at 1439734_at	16694	-0.216	-0.0323	No
137	ARF1	1420920_a_at 1426390_a_at	16736	-0.219	-0.0327	No
138	GCN5L2	1422971_at 1422972_s_at 1426783_at	16807	-0.225	-0.0344	No
139	HSPA5	1416064_a_at 1427464_s_at 1447824_x_at	16817	-0.225	-0.0333	No
140	TGDS	1424526_a_at	16826	-0.226	-0.0321	No
141	DHCR24	1418129_at 1451895_a_at	17567	-0.290	-0.0642	No
142	PITPNB	1420307_a_at 1421013_at 1434257_s_at 1454892_at	17905	-0.328	-0.0774	No
143	KPNA3	1421828_at 1445527_at 1446538_at 1450385_at 1450386_at	18058	-0.347	-0.0820	No
144	ALDH4A1	1452375_at	18361	-0.391	-0.0933	No
145	SLC39A14	1425649_at 1427035_at 1438490_at 1457770_at	18445	-0.405	-0.0943	No
146	DDX3X	1416467_at 1423042_at 1423043_s_at	18624	-0.434	-0.0996	No
147	ATP6V0C	1416392_a_at 1435732_x_at 1438925_x_at	18632	-0.435	-0.0969	No
148	ATP6V0E	1416328_a_at	18662	-0.441	-0.0953	No
149	C1QBP	1448274_at 1455821_x_at	18728	-0.452	-0.0952	No
150	UBE2M	1424345_s_at 1425858_at	18751	-0.457	-0.0931	No
151	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	18895	-0.486	-0.0964	No
152	TIMM44	1417670_at 1439371_x_at 1448801_a_at	19043	-0.516	-0.0996	No
153	HYOU1	1423290_at 1423291_s_at 1451913_a_at	19084	-0.525	-0.0979	No
154	IDH3B	1418885_a_at 1418886_s_at 1441271_at	19389	-0.587	-0.1079	No
155	SLC1A5	1416629_at 1440379_at	19588	-0.637	-0.1126	No
156	HADH2	1438391_x_at 1448286_at	19625	-0.645	-0.1099	No
157	SREBF1	1426690_a_at	19638	-0.647	-0.1061	No
158	CHERP	1431770_at 1436885_a_at 1451896_a_at	19694	-0.663	-0.1041	No
159	CCT4	1415867_at 1415868_at 1430034_at 1433447_x_at 1438560_x_at 1442569_at 1456082_x_at 1456572_x_at	19696	-0.664	-0.0996	No
160	GTF3C1	1434066_at 1438425_at 1456024_at 1459673_at	19764	-0.685	-0.0981	No
161	PIP5K1A	1421833_at 1421834_at 1450389_s_at	19923	-0.737	-0.1003	No
162	COX11	1429188_at 1457846_at	20045	-0.775	-0.1006	No
163	INPP5E	1423229_at 1423230_at	20132	-0.806	-0.0991	No
164	LDHB	1416183_a_at 1434499_a_at 1442618_at 1448237_x_at 1455235_x_at	20407	-0.928	-0.1054	No
165	PTBP1	1424874_a_at 1450443_at 1458284_at	20736	-1.149	-0.1126	No
166	IDI1	1423804_a_at 1451122_at	21124	-1.493	-0.1203	No
167	LIMK2	1418581_a_at 1439896_at 1452060_a_at 1458628_at	21143	-1.514	-0.1108	No
168	CALU	1415870_at 1441477_at	21508	-2.066	-0.1135	No
169	EEF1E1	1444757_at 1449044_at	21707	-2.630	-0.1048	No
170	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	21724	-2.697	-0.0872	No
171	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	21754	-2.824	-0.0693	No
172	RAE1	1429528_at 1444256_at 1459822_at	21824	-3.273	-0.0503	No
173	ICT1	1444276_at 1460308_a_at	21880	-3.874	-0.0265	No
174	PSMC2	1426611_at 1435859_x_at 1443307_at	21897	-4.261	0.0017	No