Details for gene set REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
Enrichment Score (ES)	0.5703555
Normalized Enrichment Score (NES)	1.8486093
Nominal p-value	0.0
FDR q-value	0.023361046
FWER p-Value	0.165

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	YBX1	1418624_at 1430720_at 1438064_at	5	6.074	0.0831	Yes
2	THOC4	1417724_at 1436211_at	7	5.638	0.1605	Yes
3	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	30	4.148	0.2164	Yes
4	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	74	3.282	0.2595	Yes
5	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	260	2.144	0.2805	Yes
6	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	485	1.692	0.2934	Yes
7	SFRS7	1424033_at 1424883_s_at 1436871_at	488	1.687	0.3165	Yes
8	NCBP2	1423045_at 1423046_s_at 1450847_at	527	1.641	0.3373	Yes
9	NUP54	1432539_a_at 1433580_at 1438951_x_at 1447253_x_at 1459651_s_at	551	1.599	0.3582	Yes
10	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	553	1.594	0.3800	Yes
11	SNRPD3	1422884_at 1422885_at 1449629_s_at	567	1.574	0.4010	Yes
12	CSTF1	1417117_at 1448597_at	790	1.354	0.4094	Yes
13	SF3A3	1423811_at	859	1.287	0.4240	Yes
14	CCAR1	1436156_at 1436157_at 1453319_at	904	1.247	0.4391	Yes
15	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	1018	1.169	0.4500	Yes
16	NUP160	1418530_at 1444892_at	1189	1.060	0.4567	Yes
17	CSTF2	1419644_at 1419645_at 1455523_at	1239	1.033	0.4687	Yes
18	PHF5A	1424170_at	1251	1.024	0.4822	Yes
19	NUP43	1432187_at 1432188_s_at	1259	1.021	0.4959	Yes
20	METTL3	1423099_a_at	1385	0.947	0.5032	Yes
21	NUPL2	1424889_at 1456773_at	1729	0.803	0.4985	Yes
22	SNRPB2	1426613_a_at 1452422_a_at	1741	0.799	0.5090	Yes
23	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	1823	0.769	0.5158	Yes
24	NUP155	1418727_at 1449200_at	1937	0.732	0.5207	Yes
25	GTF2F1	1417698_at 1417699_at	2060	0.694	0.5246	Yes
26	POLR2B	1433552_a_at	2086	0.687	0.5329	Yes
27	NUP107	1426751_s_at	2136	0.673	0.5399	Yes
28	NUP93	1424291_at	2177	0.664	0.5472	Yes
29	NUP37	1423969_at	2227	0.647	0.5538	Yes
30	SF4	1424381_at 1444699_at	2312	0.625	0.5585	Yes
31	U2AF1	1422509_at	2374	0.611	0.5641	Yes
32	MAGOH	1416212_at	2436	0.596	0.5695	Yes
33	POLR2E	1417138_s_at 1451093_at 1458326_at	2587	0.560	0.5704	Yes
34	CPSF1	1417665_a_at	3195	0.457	0.5488	No
35	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	3375	0.432	0.5466	No
36	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	3413	0.428	0.5508	No
37	NHP2L1	1416973_at	3449	0.423	0.5550	No
38	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	3847	0.377	0.5420	No
39	POLR2L	1428296_at	4017	0.364	0.5392	No
40	SNRPF	1428672_at	4477	0.327	0.5227	No
41	POLR2I	1428494_a_at	4579	0.319	0.5224	No
42	POLR2A	1422311_a_at 1426242_at 1458710_at	4584	0.318	0.5266	No
43	POLR2D	1424258_at	5247	0.275	0.5001	No
44	NUP188	1427047_at 1442314_at	5332	0.270	0.4999	No
45	PRPF6	1424036_at 1426026_at 1454789_x_at	6447	0.207	0.4518	No
46	SNRPA	1417274_at	7431	0.162	0.4090	No
47	POLR2F	1415754_at 1427402_at	7531	0.158	0.4067	No
48	SMC1A	1417830_at 1417831_at 1417832_at	8282	0.130	0.3741	No
49	POLR2G	1416270_at	9534	0.086	0.3180	No
50	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	9548	0.085	0.3186	No
51	SF3A2	1450576_a_at 1455546_s_at	10016	0.070	0.2982	No
52	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	10600	0.050	0.2722	No
53	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	10992	0.037	0.2548	No
54	POLR2C	1416341_at	11571	0.018	0.2286	No
55	POLR2H	1424473_at	11897	0.007	0.2138	No
56	EIF4E	1450909_at 1457489_at 1459371_at	12114	-0.001	0.2039	No
57	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12373	-0.010	0.1923	No
58	SFRS9	1417727_at	12595	-0.019	0.1824	No
59	PRPF4	1429724_at 1438481_at	13224	-0.042	0.1542	No
60	GTF2F2	1426626_at 1443233_at	13838	-0.066	0.1271	No
61	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	13848	-0.066	0.1276	No
62	RANBP2	1422621_at 1440104_at 1445883_at 1450690_at	14259	-0.084	0.1100	No
63	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	14513	-0.095	0.0997	No
64	SNRPB	1419260_a_at 1437193_s_at	14602	-0.099	0.0970	No
65	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	15118	-0.122	0.0751	No
66	SNRPD2	1452680_at	15177	-0.125	0.0742	No
67	TXNL4A	1419179_at	15199	-0.127	0.0750	No
68	NUP35	1426447_at	15248	-0.129	0.0745	No
69	NUP214	1434351_at 1456503_at 1457815_at	15306	-0.132	0.0737	No
70	SNRPE	1451294_s_at	15503	-0.141	0.0667	No
71	PABPN1	1415728_at 1422848_a_at 1422849_a_at 1422850_at	15749	-0.156	0.0576	No
72	SFRS4	1448778_at	16705	-0.217	0.0169	No
73	CD2BP2	1417223_at 1417224_a_at 1448624_at	16907	-0.232	0.0109	No
74	PRPF8	1422453_at	17040	-0.243	0.0082	No
75	PCBP2	1421743_a_at 1435881_at	17296	-0.264	0.0001	No
76	PCBP1	1448642_at	17297	-0.264	0.0037	No
77	U2AF2	1417260_at	17408	-0.274	0.0025	No
78	POLR2J	1417720_at 1440065_at	18123	-0.355	-0.0254	No
79	CSTF3	1424723_s_at 1443909_at	18724	-0.451	-0.0466	No
80	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	18856	-0.477	-0.0461	No
81	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	19643	-0.648	-0.0732	No
82	NUP153	1441689_at 1441733_s_at 1452176_at	20264	-0.865	-0.0897	No
83	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	20339	-0.900	-0.0807	No
84	TPR	1426948_at 1426949_s_at 1456112_at 1456651_a_at	20433	-0.940	-0.0721	No
85	PTBP1	1424874_a_at 1450443_at 1458284_at	20736	-1.149	-0.0701	No
86	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	21022	-1.372	-0.0643	No
87	DHX9	1425617_at 1425618_at 1451770_s_at	21036	-1.384	-0.0459	No
88	SLBP	1430058_at 1460168_at	21103	-1.463	-0.0289	No
89	SF3B3	1415985_at 1430075_at	21222	-1.595	-0.0124	No
90	RAE1	1429528_at 1444256_at 1459822_at	21824	-3.273	0.0050	No