Details for gene set REACTOME_FORMATION_AND_MATURATION_OF_MRNA

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
Enrichment Score (ES)	0.59425676
Normalized Enrichment Score (NES)	1.9883096
Nominal p-value	0.0
FDR q-value	0.013422839
FWER p-Value	0.013

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	YBX1	1418624_at 1430720_at 1438064_at	5	6.074	0.0795	Yes
2	THOC4	1417724_at 1436211_at	7	5.638	0.1536	Yes
3	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	30	4.148	0.2070	Yes
4	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	74	3.282	0.2482	Yes
5	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	260	2.144	0.2679	Yes
6	GTF2E1	1428124_at 1443110_at	339	1.924	0.2896	Yes
7	GTF2B	1438066_at 1451135_at	362	1.878	0.3132	Yes
8	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	485	1.692	0.3298	Yes
9	SFRS7	1424033_at 1424883_s_at 1436871_at	488	1.687	0.3519	Yes
10	NCBP2	1423045_at 1423046_s_at 1450847_at	527	1.641	0.3717	Yes
11	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	553	1.594	0.3915	Yes
12	SNRPD3	1422884_at 1422885_at 1449629_s_at	567	1.574	0.4116	Yes
13	TAF9	1422778_at 1451509_at	578	1.566	0.4317	Yes
14	GTF2E2	1448884_at	593	1.550	0.4514	Yes
15	CSTF1	1417117_at 1448597_at	790	1.354	0.4602	Yes
16	SF3A3	1423811_at	859	1.287	0.4740	Yes
17	CCAR1	1436156_at 1436157_at 1453319_at	904	1.247	0.4884	Yes
18	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	1018	1.169	0.4985	Yes
19	GTF2H2	1450701_a_at 1457818_at	1179	1.069	0.5053	Yes
20	CSTF2	1419644_at 1419645_at 1455523_at	1239	1.033	0.5161	Yes
21	PHF5A	1424170_at	1251	1.024	0.5291	Yes
22	MNAT1	1432177_a_at	1351	0.962	0.5372	Yes
23	METTL3	1423099_a_at	1385	0.947	0.5481	Yes
24	SNRPB2	1426613_a_at 1452422_a_at	1741	0.799	0.5423	Yes
25	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	1823	0.769	0.5487	Yes
26	GTF2F1	1417698_at 1417699_at	2060	0.694	0.5470	Yes
27	POLR2B	1433552_a_at	2086	0.687	0.5549	Yes
28	TAF1	1447417_at 1455513_at 1458744_at	2218	0.651	0.5574	Yes
29	TAF12	1423398_at	2229	0.645	0.5654	Yes
30	SF4	1424381_at 1444699_at	2312	0.625	0.5699	Yes
31	U2AF1	1422509_at	2374	0.611	0.5751	Yes
32	MAGOH	1416212_at	2436	0.596	0.5801	Yes
33	TAF13	1448707_at	2455	0.590	0.5871	Yes
34	POLR2E	1417138_s_at 1451093_at 1458326_at	2587	0.560	0.5884	Yes
35	GTF2A2	1433528_at	2647	0.544	0.5929	Yes
36	TAF5	1435474_at	2768	0.524	0.5943	Yes
37	SSRP1	1426788_a_at 1426789_s_at 1426790_at	2915	0.499	0.5941	No
38	CPSF1	1417665_a_at	3195	0.457	0.5873	No
39	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	3375	0.432	0.5848	No
40	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	3413	0.428	0.5887	No
41	NHP2L1	1416973_at	3449	0.423	0.5927	No
42	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	3847	0.377	0.5795	No
43	POLR2L	1428296_at	4017	0.364	0.5765	No
44	SNRPF	1428672_at	4477	0.327	0.5597	No
45	POLR2I	1428494_a_at	4579	0.319	0.5593	No
46	POLR2A	1422311_a_at 1426242_at 1458710_at	4584	0.318	0.5633	No
47	POLR2D	1424258_at	5247	0.275	0.5366	No
48	PRPF6	1424036_at 1426026_at 1454789_x_at	6447	0.207	0.4844	No
49	SNRPA	1417274_at	7431	0.162	0.4415	No
50	POLR2F	1415754_at 1427402_at	7531	0.158	0.4390	No
51	ERCC2	1460727_at	7740	0.150	0.4315	No
52	ELL	1441928_x_at 1460643_at	7901	0.144	0.4260	No
53	SMC1A	1417830_at 1417831_at 1417832_at	8282	0.130	0.4103	No
54	RNMT	1436328_at 1440002_at 1446442_at 1453106_a_at	8854	0.110	0.3856	No
55	POLR2G	1416270_at	9534	0.086	0.3556	No
56	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	9548	0.085	0.3562	No
57	SF3A2	1450576_a_at 1455546_s_at	10016	0.070	0.3357	No
58	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	10600	0.050	0.3096	No
59	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	10842	0.042	0.2992	No
60	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	10992	0.037	0.2928	No
61	POLR2C	1416341_at	11571	0.018	0.2666	No
62	POLR2H	1424473_at	11897	0.007	0.2518	No
63	ERCC3	1448497_at	12233	-0.005	0.2365	No
64	RDBP	1450705_at	12251	-0.005	0.2358	No
65	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12373	-0.010	0.2304	No
66	SFRS9	1417727_at	12595	-0.019	0.2205	No
67	TAF11	1446161_at 1451995_at	12926	-0.031	0.2058	No
68	PRPF4	1429724_at 1438481_at	13224	-0.042	0.1927	No
69	CCNT1	1419313_at 1456477_at	13828	-0.066	0.1660	No
70	GTF2F2	1426626_at 1443233_at	13838	-0.066	0.1664	No
71	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	13848	-0.066	0.1669	No
72	GTF2A1	1421357_at	14157	-0.080	0.1538	No
73	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	14513	-0.095	0.1388	No
74	SNRPB	1419260_a_at 1437193_s_at	14602	-0.099	0.1361	No
75	TH1L	1416198_at	14981	-0.116	0.1203	No
76	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	15118	-0.122	0.1156	No
77	SNRPD2	1452680_at	15177	-0.125	0.1146	No
78	TXNL4A	1419179_at	15199	-0.127	0.1153	No
79	GTF2H1	1453169_a_at	15270	-0.130	0.1138	No
80	SNRPE	1451294_s_at	15503	-0.141	0.1051	No
81	TBP	1426469_a_at 1426470_at	15631	-0.149	0.1012	No
82	PABPN1	1415728_at 1422848_a_at 1422849_a_at 1422850_at	15749	-0.156	0.0979	No
83	GTF2H3	1454092_a_at	15860	-0.162	0.0950	No
84	SFRS4	1448778_at	16705	-0.217	0.0591	No
85	CD2BP2	1417223_at 1417224_a_at 1448624_at	16907	-0.232	0.0530	No
86	PRPF8	1422453_at	17040	-0.243	0.0501	No
87	CCNH	1418585_at	17127	-0.250	0.0495	No
88	PCBP2	1421743_a_at 1435881_at	17296	-0.264	0.0452	No
89	PCBP1	1448642_at	17297	-0.264	0.0487	No
90	U2AF2	1417260_at	17408	-0.274	0.0473	No
91	TCEB2	1428263_a_at	17707	-0.305	0.0376	No
92	POLR2J	1417720_at 1440065_at	18123	-0.355	0.0233	No
93	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	18206	-0.367	0.0243	No
94	CDK9	1417269_at 1457240_at	18362	-0.391	0.0224	No
95	TAF10	1448784_at	18407	-0.397	0.0256	No
96	CSTF3	1424723_s_at 1443909_at	18724	-0.451	0.0170	No
97	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	18856	-0.477	0.0173	No
98	RNGTT	1425844_a_at 1448714_at	18936	-0.495	0.0202	No
99	TAF4	1427460_at 1452438_s_at	19291	-0.568	0.0114	No
100	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	19643	-0.648	0.0038	No
101	TCEB1	1427914_a_at 1427915_s_at 1436226_at 1452593_a_at	19835	-0.709	0.0044	No
102	TAF6	1418593_at	20174	-0.825	-0.0002	No
103	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	20339	-0.900	0.0041	No
104	TCEB3	1422591_at 1434117_at 1450676_at	20682	-1.111	0.0030	No
105	PTBP1	1424874_a_at 1450443_at 1458284_at	20736	-1.149	0.0157	No
106	DHX9	1425617_at 1425618_at 1451770_s_at	21036	-1.384	0.0201	No
107	SF3B3	1415985_at 1430075_at	21222	-1.595	0.0326	No