Details for gene set REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS
Enrichment Score (ES)	0.58871645
Normalized Enrichment Score (NES)	1.9231622
Nominal p-value	0.0
FDR q-value	0.009844896
FWER p-Value	0.055

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	YBX1	1418624_at 1430720_at 1438064_at	5	6.074	0.0953	Yes
2	THOC4	1417724_at 1436211_at	7	5.638	0.1838	Yes
3	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	30	4.148	0.2481	Yes
4	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	74	3.282	0.2977	Yes
5	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	260	2.144	0.3229	Yes
6	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	485	1.692	0.3393	Yes
7	SFRS7	1424033_at 1424883_s_at 1436871_at	488	1.687	0.3657	Yes
8	NCBP2	1423045_at 1423046_s_at 1450847_at	527	1.641	0.3898	Yes
9	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	553	1.594	0.4137	Yes
10	SNRPD3	1422884_at 1422885_at 1449629_s_at	567	1.574	0.4378	Yes
11	CSTF1	1417117_at 1448597_at	790	1.354	0.4489	Yes
12	SF3A3	1423811_at	859	1.287	0.4661	Yes
13	CCAR1	1436156_at 1436157_at 1453319_at	904	1.247	0.4837	Yes
14	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	1018	1.169	0.4969	Yes
15	GTF2H2	1450701_a_at 1457818_at	1179	1.069	0.5063	Yes
16	CSTF2	1419644_at 1419645_at 1455523_at	1239	1.033	0.5199	Yes
17	PHF5A	1424170_at	1251	1.024	0.5355	Yes
18	MNAT1	1432177_a_at	1351	0.962	0.5461	Yes
19	METTL3	1423099_a_at	1385	0.947	0.5594	Yes
20	SNRPB2	1426613_a_at 1452422_a_at	1741	0.799	0.5557	Yes
21	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	1823	0.769	0.5641	Yes
22	GTF2F1	1417698_at 1417699_at	2060	0.694	0.5642	Yes
23	POLR2B	1433552_a_at	2086	0.687	0.5739	Yes
24	SF4	1424381_at 1444699_at	2312	0.625	0.5734	Yes
25	U2AF1	1422509_at	2374	0.611	0.5802	Yes
26	MAGOH	1416212_at	2436	0.596	0.5868	Yes
27	POLR2E	1417138_s_at 1451093_at 1458326_at	2587	0.560	0.5887	Yes
28	SSRP1	1426788_a_at 1426789_s_at 1426790_at	2915	0.499	0.5816	No
29	CPSF1	1417665_a_at	3195	0.457	0.5760	No
30	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	3375	0.432	0.5746	No
31	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	3413	0.428	0.5796	No
32	NHP2L1	1416973_at	3449	0.423	0.5847	No
33	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	3847	0.377	0.5724	No
34	POLR2L	1428296_at	4017	0.364	0.5704	No
35	SNRPF	1428672_at	4477	0.327	0.5545	No
36	POLR2I	1428494_a_at	4579	0.319	0.5549	No
37	POLR2A	1422311_a_at 1426242_at 1458710_at	4584	0.318	0.5597	No
38	POLR2D	1424258_at	5247	0.275	0.5338	No
39	PRPF6	1424036_at 1426026_at 1454789_x_at	6447	0.207	0.4821	No
40	SNRPA	1417274_at	7431	0.162	0.4397	No
41	POLR2F	1415754_at 1427402_at	7531	0.158	0.4376	No
42	ERCC2	1460727_at	7740	0.150	0.4305	No
43	ELL	1441928_x_at 1460643_at	7901	0.144	0.4254	No
44	SMC1A	1417830_at 1417831_at 1417832_at	8282	0.130	0.4101	No
45	POLR2G	1416270_at	9534	0.086	0.3542	No
46	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	9548	0.085	0.3549	No
47	SF3A2	1450576_a_at 1455546_s_at	10016	0.070	0.3346	No
48	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	10600	0.050	0.3087	No
49	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	10842	0.042	0.2984	No
50	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	10992	0.037	0.2921	No
51	POLR2C	1416341_at	11571	0.018	0.2660	No
52	POLR2H	1424473_at	11897	0.007	0.2512	No
53	ERCC3	1448497_at	12233	-0.005	0.2359	No
54	RDBP	1450705_at	12251	-0.005	0.2352	No
55	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12373	-0.010	0.2298	No
56	SFRS9	1417727_at	12595	-0.019	0.2200	No
57	PRPF4	1429724_at 1438481_at	13224	-0.042	0.1919	No
58	CCNT1	1419313_at 1456477_at	13828	-0.066	0.1654	No
59	GTF2F2	1426626_at 1443233_at	13838	-0.066	0.1660	No
60	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	13848	-0.066	0.1666	No
61	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	14513	-0.095	0.1377	No
62	SNRPB	1419260_a_at 1437193_s_at	14602	-0.099	0.1353	No
63	TH1L	1416198_at	14981	-0.116	0.1198	No
64	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	15118	-0.122	0.1155	No
65	SNRPD2	1452680_at	15177	-0.125	0.1148	No
66	TXNL4A	1419179_at	15199	-0.127	0.1158	No
67	GTF2H1	1453169_a_at	15270	-0.130	0.1146	No
68	SNRPE	1451294_s_at	15503	-0.141	0.1062	No
69	PABPN1	1415728_at 1422848_a_at 1422849_a_at 1422850_at	15749	-0.156	0.0975	No
70	GTF2H3	1454092_a_at	15860	-0.162	0.0950	No
71	SFRS4	1448778_at	16705	-0.217	0.0598	No
72	CD2BP2	1417223_at 1417224_a_at 1448624_at	16907	-0.232	0.0542	No
73	PRPF8	1422453_at	17040	-0.243	0.0520	No
74	CCNH	1418585_at	17127	-0.250	0.0520	No
75	PCBP2	1421743_a_at 1435881_at	17296	-0.264	0.0484	No
76	PCBP1	1448642_at	17297	-0.264	0.0526	No
77	U2AF2	1417260_at	17408	-0.274	0.0519	No
78	TCEB2	1428263_a_at	17707	-0.305	0.0430	No
79	POLR2J	1417720_at 1440065_at	18123	-0.355	0.0296	No
80	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	18206	-0.367	0.0316	No
81	CDK9	1417269_at 1457240_at	18362	-0.391	0.0307	No
82	CSTF3	1424723_s_at 1443909_at	18724	-0.451	0.0212	No
83	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	18856	-0.477	0.0227	No
84	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	19643	-0.648	-0.0031	No
85	TCEB1	1427914_a_at 1427915_s_at 1436226_at 1452593_a_at	19835	-0.709	-0.0007	No
86	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	20339	-0.900	-0.0095	No
87	TCEB3	1422591_at 1434117_at 1450676_at	20682	-1.111	-0.0077	No
88	PTBP1	1424874_a_at 1450443_at 1458284_at	20736	-1.149	0.0079	No
89	DHX9	1425617_at 1425618_at 1451770_s_at	21036	-1.384	0.0160	No
90	SF3B3	1415985_at 1430075_at	21222	-1.595	0.0326	No