Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	NETPATH_IL6
Enrichment Score (ES)	-0.5600426
Normalized Enrichment Score (NES)	-1.6641659
Nominal p-value	0.007246377
FDR q-value	0.19308236
FWER p-Value	0.935

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PPP2R1B	1419871_at 1428265_at	432	1.758	0.0259	No
2	CEBPB	1418901_at 1427844_a_at	853	1.292	0.0403	No
3	PPP2R4	1439383_x_at 1439393_x_at 1448138_at	1692	0.818	0.0232	No
4	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	1785	0.784	0.0394	No
5	CREBBP	1434633_at 1435224_at 1436983_at 1444856_at 1457641_at 1459804_at	1966	0.723	0.0500	No
6	PIK3R2	1418463_at	3394	0.430	-0.0041	No
7	GRB2	1418508_a_at 1449111_a_at	3682	0.394	-0.0070	No
8	ERBB3	1434606_at 1452482_at	4341	0.335	-0.0284	No
9	RAC1	1423734_at 1437674_at 1451086_s_at	4418	0.331	-0.0232	No
10	HDAC1	1448246_at	4607	0.316	-0.0236	No
11	SHC1	1422853_at 1422854_at	5156	0.282	-0.0414	No
12	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	6350	0.212	-0.0904	No
13	JAK1	1433803_at 1433804_at 1433805_at	6463	0.207	-0.0901	No
14	FES	1427368_x_at 1452410_a_at	6724	0.194	-0.0970	No
15	PPP2R5D	1450560_a_at	6991	0.183	-0.1044	No
16	JAK2	1421065_at 1421066_at	7032	0.181	-0.1015	No
17	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	7076	0.179	-0.0989	No
18	PPP2R5A	1423911_at 1440189_at 1444036_at	7081	0.179	-0.0944	No
19	PPP2R2C	1438054_x_at 1438671_at 1443804_at	7448	0.162	-0.1069	No
20	HCK	1446553_at 1449455_at	7801	0.147	-0.1192	No
21	HSP90AA1	1426645_at 1437497_a_at 1438902_a_at 1455078_at	9117	0.101	-0.1767	No
22	IL6	1450297_at	9669	0.082	-0.1997	No
23	CDK5	1422590_at 1450674_at	10047	0.069	-0.2152	No
24	PTPN11	1421196_at 1427699_a_at 1451225_at	10663	0.048	-0.2421	No
25	PRKCD	1422847_a_at 1442256_at	10785	0.044	-0.2464	No
26	NFKB1	1427705_a_at 1442949_at	11030	0.036	-0.2567	No
27	BTK	1422755_at	12029	0.002	-0.3022	No
28	HRAS	1422407_s_at 1424132_at	12396	-0.011	-0.3187	No
29	PPP2R3A	1455198_a_at	12886	-0.029	-0.3403	No
30	GAB2	1419829_a_at 1420785_at 1439786_at 1446860_at	13126	-0.038	-0.3502	No
31	SOS1	1421884_at 1421885_at 1421886_at	15287	-0.131	-0.4455	No
32	PPP2CB	1421822_at 1421823_a_at 1431341_at	15694	-0.152	-0.4601	No
33	ERBB2	1424919_at	16091	-0.176	-0.4737	No
34	FOS	1423100_at	16233	-0.185	-0.4753	No
35	DAXX	1419026_at	16816	-0.225	-0.4961	No
36	TYK2	1417306_at	17085	-0.247	-0.5019	No
37	JUN	1417409_at 1448694_at	17249	-0.260	-0.5026	No
38	PPP2R1A	1415819_a_at 1438174_x_at 1438383_x_at 1438991_x_at 1455929_x_at	17578	-0.291	-0.5100	No
39	AR	1422982_at 1437064_at 1446340_at 1455647_at	17580	-0.291	-0.5025	No
40	SOCS3	1416576_at 1455899_x_at 1456212_x_at	18355	-0.390	-0.5277	No
41	CDK9	1417269_at 1457240_at	18362	-0.391	-0.5178	No
42	GAB1	1417693_a_at 1417694_at 1448814_at	19286	-0.567	-0.5453	Yes
43	PPP2R5B	1426811_at	19343	-0.577	-0.5329	Yes
44	IL6R	1422270_a_at 1452416_at	19369	-0.584	-0.5188	Yes
45	EP300	1434765_at	19856	-0.714	-0.5225	Yes
46	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	19996	-0.760	-0.5091	Yes
47	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	20548	-1.005	-0.5082	Yes
48	PPP2R5C	1425542_a_at 1425725_s_at 1425726_x_at 1427003_at 1434205_at 1434206_s_at 1444828_at	20710	-1.131	-0.4862	Yes
49	VAV1	1422932_a_at	20742	-1.152	-0.4576	Yes
50	MAP2K4	1426233_at 1442679_at 1451982_at	21011	-1.366	-0.4344	Yes
51	PIK3R1	1425514_at 1425515_at 1438682_at 1444591_at 1451737_at	21161	-1.529	-0.4015	Yes
52	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	21293	-1.674	-0.3640	Yes
53	TEC	1441524_at 1460204_at	21317	-1.708	-0.3206	Yes
54	PPP2R5E	1428461_at 1428462_at 1428463_a_at 1439401_x_at 1443533_at 1443949_at 1446356_at 1452788_at	21330	-1.729	-0.2763	Yes
55	PPP2CA	1417367_at 1444875_at 1456390_at	21342	-1.750	-0.2313	Yes
56	MAP2K6	1426850_a_at 1459292_at	21374	-1.800	-0.1860	Yes
57	NCOA1	1418594_a_at 1434515_at 1439883_at 1443397_at 1443438_at 1459277_at	21443	-1.934	-0.1388	Yes
58	MAPK1	1419568_at 1426585_s_at 1442876_at 1453104_at	21451	-1.949	-0.0885	Yes
59	PTK2B	1434653_at 1442437_at 1442927_at	21456	-1.964	-0.0376	Yes
60	STAT1	1420915_at 1440481_at 1450033_a_at 1450034_at	21604	-2.287	0.0151	Yes