Details for gene set ACTIN_CYTOSKELETON_ORGANIZATION_AND

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	ACTIN_CYTOSKELETON_ORGANIZATION_AND_BIOGENESIS
Enrichment Score (ES)	-0.5583332
Normalized Enrichment Score (NES)	-1.6855584
Nominal p-value	0.0
FDR q-value	0.30605656
FWER p-Value	0.929

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ABL1	1423999_at 1441291_at 1444134_at 1445153_at	163	2.553	0.0333	No
2	SSH1	1433874_at 1438253_at 1439237_a_at 1455854_a_at	575	1.510	0.0386	No
3	MYH9	1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at	640	1.418	0.0583	No
4	DSTN	1417124_at	883	1.194	0.0662	No
5	ARHGEF10L	1460405_at	1179	1.013	0.0689	No
6	RHOJ	1418892_at 1444982_at	1884	0.706	0.0479	No
7	DLG1	1415691_at 1445798_at 1450768_at 1459635_at	1930	0.690	0.0569	No
8	GSN	1415812_at 1436991_x_at 1437171_x_at 1441225_at 1456312_x_at 1456568_at 1456569_x_at	1975	0.677	0.0657	No
9	RASA1	1426476_at 1426477_at 1426478_at 1438998_at	2641	0.515	0.0435	No
10	DBN1	1426024_a_at 1451734_a_at	2688	0.505	0.0494	No
11	ADRA2A	1423022_at 1433600_at 1433601_at	3400	0.399	0.0232	No
12	ELMO1	1424523_at 1446610_at 1450208_a_at	3445	0.393	0.0275	No
13	FSCN2	1440605_at	3535	0.384	0.0296	No
14	NCK1	1421487_a_at 1424543_at 1447271_at	3679	0.366	0.0289	No
15	LATS1	1427679_at 1460264_at	4699	0.287	-0.0132	No
16	CRK	1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at	4804	0.281	-0.0135	No
17	MRAS	1449590_a_at	5081	0.265	-0.0219	No
18	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	5271	0.256	-0.0265	No
19	NCK2	1416796_at 1416797_at 1458432_at	6147	0.214	-0.0631	No
20	RAC1	1423734_at 1437674_at 1451086_s_at	6772	0.190	-0.0887	No
21	DYNLL1	1448682_at	6892	0.186	-0.0911	No
22	CDC42BPA	1435847_at 1436380_at 1438449_at 1442260_at 1446945_at	7303	0.172	-0.1072	No
23	ARPC1A	1416079_a_at	7445	0.167	-0.1110	No
24	CXCL12	1417574_at 1439084_at 1448823_at	8090	0.145	-0.1381	No
25	TNXB	1450798_at	8198	0.142	-0.1407	No
26	NF2	1421820_a_at 1427708_a_at 1450382_at 1451829_a_at	8584	0.131	-0.1563	No
27	SORBS3	1419329_at	8690	0.127	-0.1591	No
28	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	8925	0.120	-0.1679	No
29	LIMA1	1422499_at 1425654_a_at 1435726_at 1435727_s_at 1450629_at	9537	0.101	-0.1942	No
30	LIMK1	1417627_a_at 1425836_a_at 1456234_at 1458989_at	10271	0.080	-0.2265	No
31	RND3	1416700_at 1416701_at	10379	0.077	-0.2302	No
32	FGD5	1460578_at	10393	0.077	-0.2296	No
33	RAC3	1420554_a_at	10613	0.070	-0.2385	No
34	GHSR	1446756_at	10735	0.067	-0.2429	No
35	PLEK2	1449424_at	11067	0.058	-0.2572	No
36	CFL1	1448346_at 1455138_x_at	11312	0.051	-0.2675	No
37	WASF3	1425061_at 1444243_at	11631	0.041	-0.2814	No
38	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	11686	0.040	-0.2833	No
39	PRKG1	1443663_at 1443811_at 1443812_x_at 1444232_at 1445807_at 1445998_at 1449876_at	11939	0.032	-0.2943	No
40	CDC42EP5	1418712_at 1430018_at	12113	0.027	-0.3018	No
41	GHRL	1448980_at	12273	0.022	-0.3087	No
42	MYH11	1418122_at 1448962_at	12590	0.012	-0.3230	No
43	FGD2	1419515_at	13335	-0.012	-0.3569	No
44	DST	1421117_at 1421276_a_at 1423626_at 1442395_at 1446943_at 1450119_at 1458075_at 1459098_at 1459356_at	13356	-0.013	-0.3576	No
45	TTN	1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at	14389	-0.050	-0.4040	No
46	CDC42BPB	1434652_at 1459167_at	14697	-0.063	-0.4171	No
47	FGD6	1419322_at 1435467_at	15034	-0.077	-0.4312	No
48	CXCL1	1419209_at 1441855_x_at 1457644_s_at	15565	-0.103	-0.4538	No
49	BCAR1	1439388_s_at 1450622_at	15932	-0.124	-0.4686	No
50	RND1	1455197_at	15964	-0.126	-0.4680	No
51	ROCK1	1423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at	16107	-0.135	-0.4724	No
52	NUAK2	1429049_at	16144	-0.137	-0.4718	No
53	RHOA	1437628_s_at	16372	-0.153	-0.4798	No
54	ARPC4	1423588_at 1423589_at	16393	-0.155	-0.4782	No
55	WASL	1426776_at 1426777_a_at 1432155_at 1439832_at 1452193_a_at	16548	-0.167	-0.4826	No
56	WASF1	1418545_at 1440438_at	17217	-0.229	-0.5095	No
57	PDPK1	1415729_at 1416501_at 1459775_at 1459776_x_at	17246	-0.231	-0.5071	No
58	ARPC5	1444568_at 1448129_at	17712	-0.286	-0.5239	No
59	FGD1	1416865_at 1437369_at 1459278_at	17723	-0.287	-0.5197	No
60	MYOZ1	1448636_at 1460202_at	17763	-0.292	-0.5169	No
61	CAPG	1447803_x_at 1450355_a_at	17979	-0.322	-0.5216	No
62	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	18412	-0.380	-0.5353	No
63	SCIN	1450276_a_at	18617	-0.417	-0.5379	No
64	SORBS1	1417358_s_at 1425826_a_at 1428471_at 1436737_a_at 1440311_at 1442401_at 1443983_at 1455967_at	18756	-0.446	-0.5371	No
65	FSCN1	1416514_a_at 1416515_at 1416516_at 1444398_at 1448378_at 1457739_at	19220	-0.550	-0.5496	Yes
66	TSC1	1422043_at 1439989_at 1455252_at	19367	-0.587	-0.5469	Yes
67	ACTA1	1427735_a_at	19508	-0.620	-0.5434	Yes
68	TESK2	1426546_at	19561	-0.635	-0.5356	Yes
69	CENTD2	1428064_at	19735	-0.687	-0.5326	Yes
70	PSCD2	1450103_a_at	19753	-0.693	-0.5223	Yes
71	CDC42BPG	1436197_at	19840	-0.721	-0.5147	Yes
72	SSH2	1456153_at	20098	-0.818	-0.5134	Yes
73	LLGL1	1416621_at	20149	-0.834	-0.5024	Yes
74	CDC42EP2	1428750_at 1445870_at	20185	-0.844	-0.4906	Yes
75	ARHGDIB	1426454_at	20392	-0.931	-0.4851	Yes
76	FLNA	1426677_at	20659	-1.088	-0.4800	Yes
77	ARF6	1418822_a_at 1418823_at 1418824_at	20682	-1.104	-0.4633	Yes
78	DOCK2	1422808_s_at 1437282_at 1438334_at 1459382_at	20784	-1.172	-0.4493	Yes
79	KPTN	1423438_at 1440025_at	20826	-1.202	-0.4320	Yes
80	WASF2	1438683_at	20834	-1.206	-0.4130	Yes
81	FGD3	1433398_at 1450235_at 1454593_at	20975	-1.326	-0.3983	Yes
82	ARFIP2	1424240_at 1435498_at	21063	-1.431	-0.3794	Yes
83	PLA2G1B	1416626_at 1433948_at 1433949_x_at 1437015_x_at	21073	-1.448	-0.3567	Yes
84	NEBL	1438452_at 1439897_at 1451846_at	21101	-1.471	-0.3345	Yes
85	RHOF	1434794_at 1441510_at 1455902_x_at	21298	-1.715	-0.3161	Yes
86	AMOT	1425907_s_at 1427584_at 1454890_at	21372	-1.832	-0.2902	Yes
87	TAOK2	1438208_at 1443642_at 1456826_at	21488	-2.062	-0.2626	Yes
88	FLNB	1424828_a_at 1426750_at 1442107_at 1445534_at 1458226_at	21530	-2.159	-0.2300	Yes
89	ATP2C1	1431196_at 1434386_at 1437738_at 1439215_at 1442742_at	21557	-2.215	-0.1958	Yes
90	MTSS1	1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at	21597	-2.321	-0.1606	Yes
91	CDC42	1415724_a_at 1435807_at 1449574_a_at 1460708_s_at	21696	-2.726	-0.1216	Yes
92	EVL	1434920_a_at 1440885_at 1445957_at 1450106_a_at 1456453_at 1458889_at	21831	-3.401	-0.0734	Yes
93	RACGAP1	1421546_a_at 1441889_x_at 1451358_a_at	21907	-4.892	0.0012	Yes