Details for gene set V$PR

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$PR_02
Enrichment Score (ES)	-0.51544416
Normalized Enrichment Score (NES)	-1.5824583
Nominal p-value	0.00311042
FDR q-value	0.060168672
FWER p-Value	0.609

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SDC1	1415943_at 1415944_at 1437279_x_at 1448158_at	34	3.770	0.0548	No
2	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	293	2.032	0.0734	No
3	PRG1	1417426_at	743	1.314	0.0725	No
4	SEMA4C	1433920_at	789	1.279	0.0896	No
5	DSTN	1417124_at	883	1.194	0.1032	No
6	DOCK4	1431114_at 1436405_at 1441462_at 1441469_at 1446283_at 1457146_at 1459279_at	990	1.128	0.1152	No
7	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	1069	1.075	0.1277	No
8	CDKN1A	1421679_a_at 1424638_at	1903	0.701	0.1000	No
9	NDUFS1	1425143_a_at 1453354_at	2233	0.603	0.0940	No
10	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	2285	0.593	0.1005	No
11	CXCL14	1418456_a_at 1418457_at	2382	0.572	0.1047	No
12	AKAP3	1421531_at 1456591_x_at	2665	0.512	0.0994	No
13	CPB1	1428102_at	2689	0.505	0.1059	No
14	WNT8B	1421439_at	2877	0.468	0.1044	No
15	CALCRL	1418489_a_at 1425814_a_at 1440685_at 1459536_at	3037	0.443	0.1037	No
16	TECTA	1419632_at	3335	0.406	0.0962	No
17	ELMO1	1424523_at 1446610_at 1450208_a_at	3445	0.393	0.0971	No
18	OPN3	1417677_at	4590	0.295	0.0491	No
19	ADAMTSL1	1430313_at	4828	0.280	0.0424	No
20	FGF17	1421523_at 1456239_at	4922	0.275	0.0423	No
21	FES	1427368_x_at 1452410_a_at	5420	0.248	0.0232	No
22	MYH4	1427026_at 1458368_at	5980	0.221	0.0009	No
23	KCNJ1	1418613_at 1418614_at	6339	0.207	-0.0124	No
24	NEDD4	1421955_a_at 1444044_at 1450431_a_at 1451109_a_at	7250	0.174	-0.0515	No
25	GRB2	1418508_a_at 1449111_a_at	7353	0.170	-0.0536	No
26	DUSP10	1417163_at 1417164_at	7640	0.161	-0.0643	No
27	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	7642	0.161	-0.0619	No
28	FIGN	1450268_at	7981	0.149	-0.0752	No
29	ZP3	1419007_at	8103	0.145	-0.0786	No
30	LGI1	1423183_at 1435851_at	8222	0.142	-0.0818	No
31	CD36	1423166_at 1450883_a_at 1450884_at	8360	0.137	-0.0861	No
32	RAB30	1426452_a_at	8919	0.120	-0.1098	No
33	KCTD4	1420537_at 1441801_at	8999	0.117	-0.1117	No
34	JPH1	1421520_at 1438428_at	9047	0.116	-0.1121	No
35	SKIL	1422054_a_at 1452214_at	9202	0.111	-0.1175	No
36	FSTL5	1436800_at 1439904_at	9534	0.101	-0.1311	No
37	SEMA3A	1420416_at 1420417_at 1449865_at	9664	0.098	-0.1356	No
38	UBE2B	1423106_at 1423107_at 1430177_at 1439477_at 1460132_at	9787	0.094	-0.1398	No
39	EPHA7	1427528_a_at 1443485_at 1445635_at 1451991_at 1452380_at	10061	0.086	-0.1510	No
40	EEF1B2	1448252_a_at	10092	0.085	-0.1511	No
41	KCNH5	1441742_at	10199	0.082	-0.1547	No
42	TENC1	1452264_at	10283	0.080	-0.1573	No
43	OTX1	1437601_at	11186	0.055	-0.1978	No
44	GABRA6	1417121_at 1451706_a_at	11267	0.052	-0.2007	No
45	WNT4	1450782_at	11627	0.041	-0.2165	No
46	SMPX	1418095_at	11674	0.040	-0.2180	No
47	DLX2	1448877_at	11679	0.040	-0.2176	No
48	NSD1	1420881_at 1435088_at 1440972_at 1456916_at	12318	0.020	-0.2465	No
49	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	12680	0.010	-0.2629	No
50	LOX	1416121_at 1437903_at 1448228_at	12851	0.005	-0.2706	No
51	USP54	1428731_at	13380	-0.014	-0.2946	No
52	ELF5	1419555_at 1419556_at	13569	-0.020	-0.3029	No
53	SCNN1A	1425088_at	13607	-0.021	-0.3043	No
54	ZCCHC5	1437355_at	13779	-0.028	-0.3117	No
55	OTX2	1425926_a_at	13997	-0.036	-0.3211	No
56	LAMA4	1424807_at 1424808_at	14174	-0.043	-0.3285	No
57	PDGFB	1450413_at 1450414_at	14340	-0.049	-0.3354	No
58	OTP	1422285_at	14440	-0.053	-0.3391	No
59	NDST2	1417931_at	14726	-0.064	-0.3512	No
60	PRKCBP1	1426614_at 1429415_at 1445827_at 1456143_at 1458617_at	15054	-0.078	-0.3650	No
61	ACBD3	1426635_at 1428668_at 1452137_at 1456316_a_at	15116	-0.082	-0.3666	No
62	LRRTM3	1434759_at 1434760_at 1434761_at 1440112_at 1444477_at	15215	-0.087	-0.3698	No
63	PYGM	1448602_at	15344	-0.093	-0.3742	No
64	PROX1	1421336_at 1437894_at 1457432_at	15380	-0.095	-0.3744	No
65	KHDRBS1	1418628_at 1418630_at	15438	-0.098	-0.3756	No
66	DOLPP1	1428072_a_at	15790	-0.115	-0.3899	No
67	SLC7A8	1417929_at	15987	-0.127	-0.3970	No
68	MBP	1419646_a_at 1425263_a_at 1425264_s_at 1433532_a_at 1436201_x_at 1451961_a_at 1454651_x_at 1456228_x_at	16261	-0.145	-0.4073	No
69	MPZ	1423253_at	17488	-0.259	-0.4596	No
70	PXN	1424027_at 1426085_a_at 1456135_s_at	17857	-0.303	-0.4719	No
71	NCDN	1416852_a_at 1416853_at	17884	-0.307	-0.4685	No
72	ADNP	1423069_at	17917	-0.314	-0.4653	No
73	AMY2A	1457367_at	17963	-0.320	-0.4626	No
74	RAB1B	1424064_at	19096	-0.520	-0.5066	Yes
75	RBM3	1429169_at	19185	-0.541	-0.5026	Yes
76	KLHL5	1426530_a_at 1444486_at 1449602_at	19467	-0.610	-0.5063	Yes
77	CPEB4	1420617_at 1420618_at 1449931_at	19505	-0.620	-0.4987	Yes
78	PHC2	1416048_at 1437239_x_at 1439639_at	19674	-0.667	-0.4965	Yes
79	UVRAG	1454706_at	20021	-0.789	-0.5005	Yes
80	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	20320	-0.900	-0.5007	Yes
81	ADCY6	1418128_at	20349	-0.911	-0.4884	Yes
82	FBXO9	1417480_at 1432211_a_at	20646	-1.077	-0.4858	Yes
83	IHPK2	1428373_at 1435319_at	20773	-1.165	-0.4742	Yes
84	RANBP9	1422736_at 1448064_at 1456199_x_at	20976	-1.327	-0.4636	Yes
85	STK35	1431107_at 1439802_at	21131	-1.504	-0.4481	Yes
86	SMOX	1424268_at 1446509_at	21177	-1.561	-0.4268	Yes
87	SH2D1A	1449393_at	21180	-1.562	-0.4036	Yes
88	PACS1	1420112_at 1435762_at 1440014_at 1449737_at 1459707_at	21181	-1.563	-0.3802	Yes
89	BDNF	1422168_a_at 1422169_a_at	21186	-1.573	-0.3568	Yes
90	RERE	1454670_at	21197	-1.582	-0.3336	Yes
91	RWDD1	1427913_at 1430242_at 1454241_at	21214	-1.606	-0.3104	Yes
92	ITGA6	1422444_at 1422445_at	21299	-1.715	-0.2885	Yes
93	RNF38	1428101_at 1431993_a_at 1445272_at	21420	-1.925	-0.2652	Yes
94	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	21448	-1.981	-0.2368	Yes
95	ID3	1416630_at	21558	-2.218	-0.2087	Yes
96	ETS1	1422027_a_at 1422028_a_at 1426725_s_at 1452163_at	21604	-2.342	-0.1757	Yes
97	EIF4ENIF1	1431075_a_at 1439169_at	21627	-2.425	-0.1404	Yes
98	ATF7IP	1446323_at 1449192_at 1454973_at 1459096_at	21759	-2.998	-0.1016	Yes
99	BCL6	1421818_at 1450381_a_at	21807	-3.243	-0.0552	Yes
100	ST13	1416851_at 1442775_at 1460193_at	21884	-4.078	0.0023	Yes