Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_minus |
| GeneSet | V$PPARG_01 |
| Enrichment Score (ES) | 0.5919873 |
| Normalized Enrichment Score (NES) | 1.5539155 |
| Nominal p-value | 0.015625 |
| FDR q-value | 0.17043646 |
| FWER p-Value | 0.54 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | SMYD5 | 1425479_at 1447749_at 1451722_s_at | 150 | 2.594 | 0.1560 | Yes | ||
| 2 | SFRS6 | 1416720_at 1416721_s_at 1447898_s_at 1448454_at | 557 | 1.530 | 0.2335 | Yes | ||
| 3 | APOM | 1419095_a_at 1419096_at | 609 | 1.458 | 0.3227 | Yes | ||
| 4 | DNAJA2 | 1417182_at 1417183_at 1429476_s_at 1457233_at | 867 | 1.211 | 0.3869 | Yes | ||
| 5 | PPARGC1A | 1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at | 1679 | 0.779 | 0.3988 | Yes | ||
| 6 | CNTFR | 1419429_at 1431663_a_at | 1689 | 0.776 | 0.4470 | Yes | ||
| 7 | MRPS28 | 1452585_at | 1697 | 0.771 | 0.4951 | Yes | ||
| 8 | RQCD1 | 1450887_at | 2076 | 0.646 | 0.5184 | Yes | ||
| 9 | NR2F6 | 1449846_at 1460647_a_at 1460648_at | 2231 | 0.604 | 0.5493 | Yes | ||
| 10 | NDUFS1 | 1425143_a_at 1453354_at | 2233 | 0.603 | 0.5871 | Yes | ||
| 11 | SNRPF | 1428672_at | 3145 | 0.428 | 0.5724 | Yes | ||
| 12 | GRPEL1 | 1417320_at | 3669 | 0.368 | 0.5716 | Yes | ||
| 13 | SCNM1 | 1428364_at | 4016 | 0.335 | 0.5768 | Yes | ||
| 14 | AGPS | 1443797_at 1454918_at | 4133 | 0.326 | 0.5920 | Yes | ||
| 15 | ZIC4 | 1421539_at 1456417_at | 5095 | 0.264 | 0.5647 | No | ||
| 16 | NR2C1 | 1418605_at 1439490_at 1446194_at 1449157_at 1458338_x_at | 7726 | 0.158 | 0.4546 | No | ||
| 17 | EEF1B2 | 1448252_a_at | 10092 | 0.085 | 0.3519 | No | ||
| 18 | SYT6 | 1420188_at 1426106_a_at 1449766_at 1449767_x_at | 13964 | -0.034 | 0.1774 | No | ||
| 19 | GOLGA4 | 1417674_s_at 1448803_at 1460213_at | 14493 | -0.055 | 0.1567 | No | ||
| 20 | PRRX2 | 1432331_a_at | 15086 | -0.080 | 0.1347 | No | ||
| 21 | GPR124 | 1418379_s_at | 15913 | -0.123 | 0.1047 | No | ||
| 22 | ZSWIM3 | 1428313_at 1444571_at 1457785_at | 15947 | -0.125 | 0.1110 | No | ||
| 23 | ASXL1 | 1434561_at 1435077_at 1458380_at | 16231 | -0.144 | 0.1071 | No | ||
| 24 | HSD17B8 | 1454987_a_at | 16613 | -0.171 | 0.1005 | No | ||
| 25 | PAX7 | 1444596_at 1452510_at | 16924 | -0.199 | 0.0988 | No | ||
| 26 | MAGMAS | 1416765_s_at | 17393 | -0.249 | 0.0931 | No | ||
| 27 | USP37 | 1434242_at 1438212_at | 17828 | -0.299 | 0.0920 | No | ||
| 28 | PAK4 | 1428548_at | 18553 | -0.405 | 0.0844 | No | ||
| 29 | ESRRA | 1442864_at 1460652_at | 19001 | -0.499 | 0.0953 | No | ||
| 30 | AP1B1 | 1416279_at | 19482 | -0.615 | 0.1119 | No |
