Details for gene set V$EFC

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$EFC_Q6
Enrichment Score (ES)	-0.4751682
Normalized Enrichment Score (NES)	-1.5869274
Nominal p-value	0.0
FDR q-value	0.06255702
FWER p-Value	0.585

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	XPOT	1428772_at 1428949_at 1441681_at 1441682_s_at	233	2.236	0.0095	No
2	NONO	1415820_x_at 1431239_at 1448103_s_at	344	1.895	0.0216	No
3	HES1	1418102_at	506	1.589	0.0285	No
4	CD68	1449164_at	533	1.558	0.0414	No
5	SLC7A1	1421533_at 1454991_at 1454992_at	537	1.554	0.0554	No
6	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	1105	1.052	0.0388	No
7	NPAS3	1421567_at 1429138_at 1438060_at 1450287_at	1319	0.935	0.0374	No
8	FKRP	1436812_at 1437536_at 1438414_at	1340	0.923	0.0449	No
9	UBE2L3	1417907_at 1417908_s_at 1448879_at 1448880_at	1357	0.918	0.0524	No
10	MRPL32	1424372_at	1418	0.880	0.0576	No
11	MORF4L2	1415778_at 1439413_x_at	1447	0.869	0.0642	No
12	DHX30	1416140_a_at 1438832_x_at 1438969_x_at 1453251_at	1624	0.800	0.0633	No
13	PSMA2	1448206_at	1685	0.777	0.0676	No
14	NUDC	1419471_a_at	1759	0.747	0.0710	No
15	YWHAG	1420816_at 1420817_at 1450012_x_at 1459693_x_at	1821	0.725	0.0748	No
16	CARS	1427330_at 1452394_at	1909	0.698	0.0771	No
17	NEK2	1417299_at 1437579_at 1437580_s_at 1443999_at	2138	0.631	0.0723	No
18	CACNA1D	1427974_s_at 1428051_a_at	2203	0.611	0.0749	No
19	THRA	1426997_at 1443952_at 1454675_at	2216	0.607	0.0798	No
20	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	2285	0.593	0.0820	No
21	ARMC3	1429815_at 1429816_at	2390	0.571	0.0824	No
22	RPP21	1449021_at	2485	0.547	0.0830	No
23	FAF1	1418242_at 1434370_s_at	2867	0.470	0.0698	No
24	MT4	1450645_at	2992	0.450	0.0681	No
25	GDPD2	1429076_a_at	3363	0.403	0.0548	No
26	ARL4A	1425411_at 1431429_a_at 1435092_at	3555	0.382	0.0494	No
27	LDB2	1421101_a_at 1439557_s_at 1445126_at 1456786_at	3667	0.368	0.0477	No
28	FOSB	1422134_at	3800	0.354	0.0448	No
29	FIBCD1	1435482_at	3904	0.345	0.0432	No
30	SNPH	1435210_s_at	4070	0.331	0.0386	No
31	HNRPF	1450963_at	4165	0.323	0.0372	No
32	HOXA3	1427433_s_at 1441070_at 1452421_at	4175	0.323	0.0397	No
33	PDCL2	1432503_a_at	4274	0.315	0.0380	No
34	GGN	1445278_at	4470	0.303	0.0318	No
35	RNF141	1418466_at 1427120_at 1433655_at 1449086_at 1449087_at	4633	0.292	0.0270	No
36	GALNT14	1453630_at	4673	0.289	0.0278	No
37	YWHAE	1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at	4726	0.285	0.0280	No
38	HOXD4	1450209_at	4759	0.283	0.0291	No
39	NEUROD2	1444362_at	4800	0.281	0.0298	No
40	CYP26B1	1460011_at	4831	0.279	0.0309	No
41	TCEAL1	1424634_at	4843	0.279	0.0329	No
42	OSR2	1426155_a_at 1430950_at	4892	0.277	0.0332	No
43	ABI2	1433985_at 1436984_at 1444783_at 1458053_at 1460153_at	4926	0.274	0.0342	No
44	SLC39A12	1436611_at 1447248_at	5032	0.268	0.0318	No
45	MAGED1	1450062_a_at	5225	0.258	0.0253	No
46	INSRR	1420564_at	5597	0.238	0.0104	No
47	NLGN3	1456384_at	5600	0.238	0.0124	No
48	BTG4	1426520_at	5700	0.233	0.0100	No
49	NTRK1	1443990_at	5774	0.231	0.0087	No
50	TTC16	1455414_at	6008	0.220	-0.0000	No
51	IGSF8	1460675_at	6133	0.215	-0.0038	No
52	GRIK5	1418784_at	6179	0.213	-0.0039	No
53	BLOC1S2	1429048_at	6198	0.212	-0.0028	No
54	TBC1D16	1435763_at 1442149_at	6223	0.211	-0.0020	No
55	DPYSL5	1441246_s_at 1449290_at	6284	0.209	-0.0029	No
56	HOXC6	1427361_at 1427362_x_at 1427454_at	6502	0.200	-0.0111	No
57	AKAP1	1418279_a_at 1449019_at	6703	0.193	-0.0185	No
58	FOXD3	1422210_at	6732	0.192	-0.0181	No
59	VIT	1426231_at	6917	0.185	-0.0249	No
60	KCNN3	1421632_at 1459308_at	6941	0.185	-0.0242	No
61	WARS2	1429279_at 1435273_at	6949	0.184	-0.0229	No
62	BMP6	1450759_at 1459947_at	7193	0.175	-0.0325	No
63	SIX1	1427277_at	7392	0.169	-0.0401	No
64	BTRC	1417325_at 1425680_a_at 1443142_at 1446925_at 1447120_at 1456780_at	7499	0.166	-0.0435	No
65	RPL32	1435897_at	7556	0.164	-0.0446	No
66	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	7614	0.162	-0.0457	No
67	HOXA4	1420226_x_at 1427354_at	7770	0.156	-0.0514	No
68	HNRPH2	1415963_at	7867	0.153	-0.0545	No
69	GLA	1418248_at 1449006_at	7973	0.150	-0.0579	No
70	SHANK1	1444240_at	8025	0.147	-0.0590	No
71	GRIN3A	1436575_at 1438866_at 1458378_at	8110	0.144	-0.0615	No
72	TDRD7	1426716_at 1459216_at	8197	0.142	-0.0642	No
73	HOXC4	1422870_at	8342	0.138	-0.0696	No
74	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8486	0.134	-0.0749	No
75	BTBD3	1425660_at 1433868_at 1442748_at	8487	0.134	-0.0737	No
76	HOXB6	1451660_a_at	8772	0.124	-0.0857	No
77	PDZRN4	1456512_at	8792	0.124	-0.0854	No
78	SLC17A6	1418610_at 1428379_at	8825	0.123	-0.0858	No
79	PCYT1B	1436124_at 1437648_at	9141	0.113	-0.0992	No
80	CDX4	1421552_at	9344	0.107	-0.1076	No
81	PSD	1435780_at	9358	0.107	-0.1072	No
82	FGF9	1420795_at 1438718_at 1445258_at	9580	0.100	-0.1165	No
83	BMP5	1421282_at 1421283_at 1444470_x_at 1455851_at	9632	0.099	-0.1179	No
84	HOXA11	1420414_at	9646	0.098	-0.1176	No
85	FLRT1	1443143_at	9698	0.097	-0.1191	No
86	PCDH17	1436920_at 1446821_at 1453070_at	9959	0.089	-0.1302	No
87	TSGA14	1419686_at 1434576_at 1443792_at 1445416_at	10168	0.083	-0.1391	No
88	TENC1	1452264_at	10283	0.080	-0.1436	No
89	CACNA2D3	1419225_at	10401	0.077	-0.1483	No
90	AMHR2	1427989_at 1438967_x_at 1457021_x_at	10578	0.072	-0.1557	No
91	SASH1	1432055_at 1446880_at 1448005_at	10611	0.071	-0.1566	No
92	RGL1	1418535_at 1440662_at 1449124_at	10661	0.069	-0.1582	No
93	PCYT1A	1421957_a_at 1424453_at 1438011_at 1450434_s_at	10666	0.069	-0.1578	No
94	FERD3L	1422410_at	10717	0.067	-0.1595	No
95	DNAH9	1442412_at 1457401_at	10795	0.065	-0.1624	No
96	EYA1	1421727_at 1443117_at 1457424_at	10984	0.060	-0.1705	No
97	B3GALT2	1423084_at 1437433_at 1437644_at	11193	0.054	-0.1796	No
98	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	11495	0.045	-0.1930	No
99	EFNB3	1423085_at	11597	0.042	-0.1973	No
100	TBPL1	1431415_a_at 1434907_at	11830	0.035	-0.2076	No
101	PDE1A	1431625_at 1449298_a_at	12067	0.028	-0.2183	No
102	MET	1422990_at	12159	0.025	-0.2222	No
103	STMN4	1418105_at	12176	0.025	-0.2227	No
104	BCL2L1	1420887_a_at 1420888_at 1426050_at 1426191_a_at	12279	0.022	-0.2272	No
105	USP12	1425805_a_at 1427478_at 1434483_at	12311	0.021	-0.2285	No
106	SLC22A8	1416966_at 1435418_at	12394	0.018	-0.2321	No
107	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	12530	0.014	-0.2381	No
108	HOXA10	1431475_a_at 1446408_at	12570	0.013	-0.2398	No
109	CAMK2A	1437125_at 1441734_at 1442707_at 1443876_at 1452453_a_at 1457311_at	12743	0.008	-0.2477	No
110	TNKS1BP1	1427051_at	12795	0.007	-0.2499	No
111	LMO3	1455754_at	12797	0.007	-0.2499	No
112	SEMA5B	1422146_at 1435963_at	13022	-0.001	-0.2602	No
113	PPIL4	1424043_at	13038	-0.002	-0.2609	No
114	EN2	1418868_at	13039	-0.002	-0.2609	No
115	SENP1	1424330_at 1428925_at 1451319_at	13044	-0.002	-0.2611	No
116	SOX2	1416967_at	13135	-0.005	-0.2651	No
117	MITF	1422025_at 1455214_at	13334	-0.012	-0.2741	No
118	SCNN1A	1425088_at	13607	-0.021	-0.2865	No
119	ALMS1	1456950_at	13832	-0.030	-0.2965	No
120	SYT6	1420188_at 1426106_a_at 1449766_at 1449767_x_at	13964	-0.034	-0.3022	No
121	BCL2L2	1423572_at 1430453_a_at 1430454_x_at 1451029_at	14228	-0.045	-0.3139	No
122	COPS5	1439243_x_at 1460171_at	14253	-0.046	-0.3146	No
123	GPR22	1434672_at 1434673_at 1440019_at	14336	-0.049	-0.3179	No
124	PAK6	1445475_at 1455200_at	14863	-0.070	-0.3415	No
125	SMCR7	1434072_at	14969	-0.074	-0.3457	No
126	PRKCBP1	1426614_at 1429415_at 1445827_at 1456143_at 1458617_at	15054	-0.078	-0.3488	No
127	SLK	1419092_a_at 1425977_a_at 1433999_at 1441262_at 1443815_x_at 1449336_a_at	15077	-0.079	-0.3491	No
128	KCNA2	1422197_at	15151	-0.084	-0.3517	No
129	VEGF	1420909_at 1451959_a_at	15178	-0.085	-0.3522	No
130	BNC2	1438861_at 1440593_at 1459132_at	15393	-0.096	-0.3611	No
131	ARID1A	1447104_at	15459	-0.098	-0.3632	No
132	DFNB31	1432555_at 1436485_s_at 1436486_x_at 1442507_at 1447438_at	15811	-0.117	-0.3783	No
133	THNSL1	1427936_at 1452605_at	15970	-0.126	-0.3845	No
134	ITGB8	1436223_at	15999	-0.128	-0.3846	No
135	ROBO3	1421565_at 1436634_at	16244	-0.144	-0.3945	No
136	ADCK4	1448490_at	16371	-0.153	-0.3989	No
137	HMGN3	1431777_a_at 1434875_a_at 1459040_at	16734	-0.182	-0.4139	No
138	CELSR2	1422073_a_at 1435336_at	16764	-0.184	-0.4136	No
139	MAP1A	1460566_at	16794	-0.187	-0.4132	No
140	PHTF1	1449148_a_at	16851	-0.192	-0.4141	No
141	TM9SF1	1418198_a_at 1442908_at	16963	-0.202	-0.4174	No
142	RREB1	1428657_at 1434741_at 1438216_at 1442047_at 1452862_at	17073	-0.214	-0.4204	No
143	CRIP2	1417311_at	17131	-0.221	-0.4211	No
144	HM13	1417287_at 1428855_at 1428856_at 1438456_at 1438865_at 1455631_at	17398	-0.249	-0.4310	No
145	NRGN	1423231_at	17419	-0.253	-0.4297	No
146	PPT2	1418302_at	17543	-0.266	-0.4329	No
147	ARPC5	1444568_at 1448129_at	17712	-0.286	-0.4381	No
148	BMPR2	1419616_at 1434310_at 1441652_at	17993	-0.323	-0.4480	No
149	GTF3C4	1434320_at 1438692_at	18042	-0.328	-0.4473	No
150	PTPN22	1417995_at 1442820_at	18137	-0.342	-0.4485	No
151	RFX4	1432053_at 1436931_at 1443312_at	18263	-0.362	-0.4510	No
152	CBX6	1424407_s_at 1429290_at	18307	-0.367	-0.4496	No
153	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	18455	-0.386	-0.4529	No
154	MTA2	1423165_a_at	18509	-0.398	-0.4517	No
155	ZFP36L1	1422528_a_at 1450644_at	18597	-0.412	-0.4520	No
156	PHCA	1429520_a_at 1438435_at 1453179_at 1459771_x_at	19056	-0.512	-0.4685	No
157	NDUFS4	1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at	19203	-0.545	-0.4702	Yes
158	IRS2	1443969_at	19213	-0.548	-0.4657	Yes
159	STK36	1434733_at 1453584_at	19250	-0.561	-0.4623	Yes
160	PDE6D	1416843_at	19251	-0.561	-0.4572	Yes
161	AP1M1	1416307_at 1459832_s_at	19345	-0.583	-0.4562	Yes
162	GTF3C1	1434066_at 1438425_at 1456024_at 1459673_at	19452	-0.608	-0.4556	Yes
163	STRN4	1426209_at	19526	-0.626	-0.4533	Yes
164	LSM6	1431054_at 1437108_at 1437109_s_at 1455926_at	19572	-0.637	-0.4496	Yes
165	RAD9A	1418404_at	19655	-0.662	-0.4474	Yes
166	FXYD6	1417343_at	19683	-0.670	-0.4426	Yes
167	TMEM24	1428095_a_at 1457585_at	19728	-0.685	-0.4384	Yes
168	PPP3CB	1427468_at 1428473_at 1428474_at 1433835_at 1446149_at 1459378_at	19815	-0.712	-0.4359	Yes
169	NOS1	1422949_at 1438483_at 1458626_at	19862	-0.729	-0.4314	Yes
170	KLF3	1421604_a_at 1429360_at 1431630_a_at 1441200_at 1442920_at 1454666_at	19902	-0.745	-0.4265	Yes
171	NCOA5	1424055_at 1456997_at	19965	-0.767	-0.4224	Yes
172	JMJD1A	1426810_at	19993	-0.776	-0.4166	Yes
173	TRIM39	1418851_at	20024	-0.790	-0.4109	Yes
174	EIF2C1	1434331_at	20147	-0.833	-0.4089	Yes
175	DDX17	1437773_x_at 1439037_at 1452155_a_at	20612	-1.055	-0.4207	Yes
176	SLC4A2	1416637_at	20776	-1.166	-0.4177	Yes
177	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20881	-1.246	-0.4112	Yes
178	KLHL1	1436465_at 1449241_at	20952	-1.300	-0.4027	Yes
179	STAT5B	1422102_a_at 1422103_a_at	21046	-1.408	-0.3942	Yes
180	PHF15	1430081_at 1455345_at	21049	-1.412	-0.3815	Yes
181	KCNE1	1420672_at 1441035_at	21068	-1.443	-0.3693	Yes
182	DDX31	1434182_at 1438962_s_at	21078	-1.451	-0.3566	Yes
183	BDNF	1422168_a_at 1422169_a_at	21186	-1.573	-0.3473	Yes
184	CD69	1428735_at	21200	-1.588	-0.3335	Yes
185	CCRK	1422494_s_at	21407	-1.899	-0.3258	Yes
186	EBNA1BP2	1428315_at 1437512_x_at 1439898_at 1457668_x_at	21565	-2.233	-0.3129	Yes
187	GBF1	1415709_s_at 1415757_at 1432677_at 1438207_at	21611	-2.381	-0.2934	Yes
188	CCDC6	1428311_at 1459159_a_at	21615	-2.396	-0.2719	Yes
189	HS2ST1	1422739_at 1440905_at 1450729_at 1450730_at	21662	-2.541	-0.2510	Yes
190	CCND2	1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at	21702	-2.755	-0.2279	Yes
191	SEP15	1448903_at 1454525_at	21740	-2.899	-0.2034	Yes
192	RNF25	1442108_at 1448674_at	21745	-2.915	-0.1772	Yes
193	BCL6	1421818_at 1450381_a_at	21807	-3.243	-0.1507	Yes
194	RRM1	1415878_at 1440073_at 1448127_at	21829	-3.372	-0.1211	Yes
195	ST13	1416851_at 1442775_at 1460193_at	21884	-4.078	-0.0867	Yes
196	PSMF1	1424369_at 1424370_s_at 1424371_at 1451337_at	21890	-4.152	-0.0494	Yes
197	ETS2	1416268_at 1437809_x_at 1447685_x_at	21919	-5.684	0.0007	Yes