Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_Q3
Enrichment Score (ES)	0.3631095
Normalized Enrichment Score (NES)	1.2780348
Nominal p-value	0.046376813
FDR q-value	0.2702092
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	21	4.111	0.0446	Yes
2	TCP1	1442317_at 1448122_at	33	3.812	0.0863	Yes
3	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	128	2.711	0.1120	Yes
4	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	250	2.192	0.1307	Yes
5	MCM6	1416251_at 1438852_x_at 1447756_x_at	291	2.041	0.1515	Yes
6	RFC1	1418342_at 1449050_at 1451920_a_at	399	1.772	0.1662	Yes
7	MCM4	1416214_at 1436708_x_at	574	1.511	0.1750	Yes
8	CPNE5	1442166_at	616	1.447	0.1891	Yes
9	RAD51	1418281_at	828	1.240	0.1932	Yes
10	RBBP7	1415775_at 1456227_x_at	948	1.148	0.2004	Yes
11	EPHB2	1425015_at 1425016_at 1442471_at 1445417_at 1454022_at	1021	1.107	0.2094	Yes
12	PRPS1	1416052_at	1029	1.101	0.2212	Yes
13	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	1069	1.075	0.2314	Yes
14	POLA2	1425794_at 1448369_at 1456713_at	1155	1.027	0.2388	Yes
15	CDC25A	1417131_at 1417132_at 1445995_at	1166	1.019	0.2497	Yes
16	GCH1	1420499_at 1429692_s_at	1219	0.991	0.2582	Yes
17	CDCA7	1428069_at 1445681_at	1228	0.987	0.2688	Yes
18	USP1	1423674_at 1423675_at 1451080_at	1313	0.937	0.2753	Yes
19	MRPL18	1448373_at	1371	0.908	0.2828	Yes
20	SLC25A3	1416300_a_at 1440302_at	1385	0.901	0.2921	Yes
21	TOPBP1	1452241_at 1458480_at	1408	0.885	0.3009	Yes
22	UFD1L	1418087_at 1432367_a_at	1435	0.873	0.3094	Yes
23	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	1552	0.829	0.3133	Yes
24	PCSK4	1425824_a_at	1565	0.826	0.3219	Yes
25	RANBP1	1422547_at	1682	0.778	0.3252	Yes
26	EZH2	1416544_at 1444263_at	1694	0.773	0.3332	Yes
27	GMNN	1417506_at	1722	0.763	0.3404	Yes
28	UNG	1425753_a_at	1740	0.755	0.3480	Yes
29	PCNA	1417947_at	2101	0.641	0.3386	Yes
30	LIG1	1416641_at	2126	0.633	0.3445	Yes
31	GRIK2	1425790_a_at 1439286_at 1440602_at 1445090_at 1457683_at	2167	0.622	0.3495	Yes
32	POLE2	1427094_at 1431440_at	2223	0.606	0.3537	Yes
33	PELP1	1425042_s_at 1449973_a_at	2230	0.604	0.3601	Yes
34	UXT	1418986_a_at	2740	0.495	0.3422	Yes
35	SHMT1	1422198_a_at 1425177_at 1425178_s_at 1425179_at	2807	0.480	0.3445	Yes
36	STAG2	1421849_at 1450396_at	2813	0.478	0.3496	Yes
37	ABCF2	1423863_at	2876	0.468	0.3519	Yes
38	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	3096	0.435	0.3467	Yes
39	SLC38A1	1415903_at 1454764_s_at	3107	0.433	0.3510	Yes
40	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	3208	0.421	0.3511	Yes
41	OLFML3	1448475_at	3307	0.409	0.3511	Yes
42	E2F3	1427462_at 1434564_at	3343	0.405	0.3540	Yes
43	NUP153	1441689_at 1441733_s_at 1452176_at	3365	0.403	0.3575	Yes
44	IMPDH2	1415851_a_at 1415852_at	3467	0.391	0.3572	Yes
45	CDC45L	1416575_at 1457838_at	3499	0.388	0.3601	Yes
46	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	3572	0.381	0.3610	Yes
47	KBTBD7	1428192_at 1439865_at 1452700_s_at	3617	0.374	0.3631	Yes
48	PIM1	1423006_at 1435458_at	3779	0.357	0.3597	No
49	SNPH	1435210_s_at	4070	0.331	0.3500	No
50	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	4253	0.317	0.3452	No
51	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	4433	0.305	0.3403	No
52	NPR3	1435184_at 1448024_at 1450286_at	4467	0.303	0.3422	No
53	EPHB1	1455188_at	4510	0.300	0.3436	No
54	LASP1	1438633_x_at 1438634_x_at 1439264_x_at 1444947_at 1448207_at 1455470_x_at 1456309_x_at 1456469_x_at 1456578_x_at 1460173_at	4648	0.291	0.3405	No
55	MCM8	1429557_at	4954	0.272	0.3295	No
56	PKMYT1	1418481_at 1438601_at	5674	0.234	0.2991	No
57	FBXO5	1429499_at	5792	0.230	0.2962	No
58	LHX5	1420348_at	6269	0.210	0.2767	No
59	MCM3	1420029_at 1426653_at	6514	0.200	0.2677	No
60	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	6535	0.199	0.2690	No
61	WEE1	1416773_at 1416774_at	6589	0.197	0.2688	No
62	TRIM47	1426784_at	6744	0.192	0.2638	No
63	NDUFA11	1429708_at 1444154_at	6857	0.187	0.2607	No
64	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	6958	0.184	0.2582	No
65	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	7051	0.181	0.2560	No
66	ORC1L	1422663_at 1443172_at	7176	0.176	0.2522	No
67	APRIN	1435242_at 1436161_at 1441553_at	7191	0.175	0.2535	No
68	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	7642	0.161	0.2346	No
69	PAQR4	1423101_at	7684	0.159	0.2345	No
70	PLK4	1419838_s_at 1426580_at 1452115_a_at	7775	0.156	0.2321	No
71	PAPOLG	1427241_at 1446307_at	7979	0.149	0.2244	No
72	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	8317	0.139	0.2105	No
73	NOL4	1430189_at 1441447_at 1456387_at	8449	0.135	0.2060	No
74	PCSK1	1421396_at	8667	0.128	0.1974	No
75	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	8779	0.124	0.1937	No
76	JPH1	1421520_at 1438428_at	9047	0.116	0.1827	No
77	ARHGAP11A	1438434_at	9153	0.113	0.1792	No
78	INSM1	1421399_at 1455865_at	9589	0.100	0.1603	No
79	STMN1	1415849_s_at	9641	0.098	0.1590	No
80	ASCL1	1437086_at 1450164_at	10179	0.083	0.1353	No
81	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	10198	0.082	0.1354	No
82	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10604	0.071	0.1176	No
83	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	10720	0.067	0.1130	No
84	CACNA1G	1423365_at	10844	0.063	0.1081	No
85	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	11083	0.057	0.0978	No
86	MDGA1	1432062_at	11345	0.050	0.0863	No
87	SLC6A4	1417150_at	11422	0.048	0.0834	No
88	SYT11	1429314_at 1429315_at 1429729_at 1436176_at 1449264_at 1455176_a_at	11458	0.047	0.0823	No
89	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	11644	0.041	0.0742	No
90	SALL1	1450489_at	11673	0.040	0.0734	No
91	AP4M1	1418846_at	11922	0.033	0.0624	No
92	KLF4	1417394_at 1417395_at	12105	0.027	0.0543	No
93	IPO7	1442511_at 1454955_at 1458165_at	12189	0.024	0.0508	No
94	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	12372	0.019	0.0426	No
95	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	12530	0.014	0.0356	No
96	BAT3	1433890_a_at	12600	0.012	0.0325	No
97	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	12662	0.011	0.0299	No
98	PODN	1435180_at	12669	0.011	0.0297	No
99	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	12732	0.008	0.0269	No
100	DLST	1423710_at 1430161_at 1431011_at 1437775_at	12963	0.001	0.0164	No
101	ADAMTS2	1435990_at 1455720_at 1457058_at	13338	-0.012	-0.0007	No
102	TREX2	1449367_at	13598	-0.021	-0.0123	No
103	HS6ST3	1421599_at	13926	-0.033	-0.0270	No
104	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	14092	-0.040	-0.0341	No
105	HMGN2	1433507_a_at	14417	-0.051	-0.0484	No
106	FMO4	1425799_at 1444852_at	14834	-0.068	-0.0668	No
107	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	14914	-0.071	-0.0696	No
108	ZIM2	1432297_at	15060	-0.078	-0.0754	No
109	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	15219	-0.087	-0.0817	No
110	PRKDC	1451576_at	15265	-0.089	-0.0828	No
111	MCM2	1434079_s_at 1448777_at	15390	-0.096	-0.0874	No
112	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	15505	-0.100	-0.0915	No
113	NRP2	1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at	15729	-0.112	-0.1005	No
114	ADCY8	1418754_at 1443704_at	15761	-0.114	-0.1007	No
115	CDC6	1417019_a_at	15905	-0.122	-0.1059	No
116	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	16020	-0.130	-0.1097	No
117	SIX5	1427560_at	16189	-0.141	-0.1159	No
118	KLF5	1430255_at 1451021_a_at 1451739_at	16500	-0.163	-0.1283	No
119	DNAJC5G	1437814_at	16663	-0.177	-0.1338	No
120	ATAD2	1436174_at 1443146_at 1443229_at	16665	-0.177	-0.1319	No
121	ARID4A	1436191_at 1438464_at 1456420_at	16749	-0.183	-0.1336	No
122	HNRPD	1425142_a_at 1446083_at	16786	-0.186	-0.1332	No
123	ONECUT1	1421447_at 1450252_at 1456974_at	16867	-0.194	-0.1348	No
124	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	17519	-0.262	-0.1618	No
125	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17524	-0.263	-0.1590	No
126	RHD	1417049_at	17587	-0.272	-0.1589	No
127	TMEM15	1424366_at	17666	-0.280	-0.1593	No
128	DDB2	1425706_a_at 1436680_s_at	17749	-0.290	-0.1599	No
129	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	17821	-0.299	-0.1598	No
130	CLTA	1421062_s_at 1434540_a_at 1444328_at	18004	-0.324	-0.1646	No
131	TBX6	1449868_at	18194	-0.351	-0.1694	No
132	PPP1R8	1424554_at 1435821_s_at	18658	-0.425	-0.1860	No
133	CTCF	1418330_at 1449042_at	18744	-0.444	-0.1849	No
134	E2F1	1417878_at 1431875_a_at 1447840_x_at	18940	-0.485	-0.1885	No
135	SLC25A14	1417154_at	18976	-0.494	-0.1847	No
136	MAZ	1427099_at	19156	-0.534	-0.1870	No
137	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	19353	-0.584	-0.1895	No
138	CASP8AP2	1449217_at	19404	-0.598	-0.1852	No
139	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	19417	-0.600	-0.1791	No
140	MXD3	1422970_at 1438847_at 1448878_at	19438	-0.605	-0.1733	No
141	CNOT3	1435965_at 1441465_at	19522	-0.624	-0.1702	No
142	CTDSP1	1452055_at	19758	-0.696	-0.1733	No
143	PHF12	1434922_at 1453579_at	20058	-0.802	-0.1781	No
144	RAB11B	1423448_at	20120	-0.824	-0.1718	No
145	H2AFZ	1441370_at	20272	-0.877	-0.1690	No
146	PHF13	1455175_at	20428	-0.946	-0.1657	No
147	PIAS1	1422581_at 1446448_at 1455486_at 1455611_at	20537	-1.007	-0.1595	No
148	DDX17	1437773_x_at 1439037_at 1452155_a_at	20612	-1.055	-0.1512	No
149	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20881	-1.246	-0.1497	No
150	ZCCHC8	1423755_at 1441639_at	20886	-1.249	-0.1360	No
151	FLI1	1422024_at 1433512_at 1441584_at	21006	-1.360	-0.1264	No
152	PHF15	1430081_at 1455345_at	21049	-1.412	-0.1127	No
153	STK35	1431107_at 1439802_at	21131	-1.504	-0.0998	No
154	BARHL1	1418811_at 1418812_a_at	21241	-1.648	-0.0865	No
155	PPP1CC	1440594_at	21253	-1.667	-0.0686	No
156	E2F7	1437187_at	21302	-1.725	-0.0517	No
157	FOXO3A	1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at	21546	-2.180	-0.0387	No
158	ID3	1416630_at	21558	-2.218	-0.0146	No
159	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21735	-2.877	0.0091	No