Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_minus |
GeneSet | V$E2F4DP1_01 |
Enrichment Score (ES) | 0.38748065 |
Normalized Enrichment Score (NES) | 1.3684127 |
Nominal p-value | 0.028938906 |
FDR q-value | 0.28242442 |
FWER p-Value | 0.994 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 21 | 4.111 | 0.0418 | Yes | ||
2 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 65 | 3.235 | 0.0735 | Yes | ||
3 | HNRPA2B1 | 1420365_a_at 1433829_a_at 1433830_at 1434047_x_at | 129 | 2.707 | 0.0987 | Yes | ||
4 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 291 | 2.041 | 0.1126 | Yes | ||
5 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 293 | 2.032 | 0.1336 | Yes | ||
6 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 297 | 2.009 | 0.1544 | Yes | ||
7 | NRK | 1436399_s_at 1450078_at 1450079_at | 341 | 1.896 | 0.1722 | Yes | ||
8 | MYC | 1424942_a_at | 529 | 1.566 | 0.1799 | Yes | ||
9 | MCM4 | 1416214_at 1436708_x_at | 574 | 1.511 | 0.1935 | Yes | ||
10 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 792 | 1.274 | 0.1968 | Yes | ||
11 | MAPK6 | 1419168_at 1419169_at 1429963_at 1459146_at | 794 | 1.272 | 0.2100 | Yes | ||
12 | ATF5 | 1425927_a_at | 915 | 1.171 | 0.2167 | Yes | ||
13 | RBBP7 | 1415775_at 1456227_x_at | 948 | 1.148 | 0.2272 | Yes | ||
14 | PRPS1 | 1416052_at | 1029 | 1.101 | 0.2349 | Yes | ||
15 | SNRPD1 | 1416336_s_at | 1039 | 1.093 | 0.2459 | Yes | ||
16 | PHF5A | 1424170_at | 1064 | 1.077 | 0.2560 | Yes | ||
17 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 1069 | 1.075 | 0.2670 | Yes | ||
18 | FKBP5 | 1416125_at 1447736_at 1448231_at 1458089_at | 1145 | 1.033 | 0.2743 | Yes | ||
19 | CDC25A | 1417131_at 1417132_at 1445995_at | 1166 | 1.019 | 0.2840 | Yes | ||
20 | SUV39H1 | 1427382_a_at 1432227_at 1432236_a_at | 1205 | 1.000 | 0.2926 | Yes | ||
21 | CDCA7 | 1428069_at 1445681_at | 1228 | 0.987 | 0.3019 | Yes | ||
22 | H2AFV | 1428029_a_at 1436596_at | 1230 | 0.985 | 0.3121 | Yes | ||
23 | POU4F1 | 1429667_at 1429668_at | 1360 | 0.916 | 0.3157 | Yes | ||
24 | DNAJC9 | 1426473_at | 1398 | 0.891 | 0.3232 | Yes | ||
25 | TOPBP1 | 1452241_at 1458480_at | 1408 | 0.885 | 0.3320 | Yes | ||
26 | RANBP1 | 1422547_at | 1682 | 0.778 | 0.3276 | Yes | ||
27 | EZH2 | 1416544_at 1444263_at | 1694 | 0.773 | 0.3351 | Yes | ||
28 | GMNN | 1417506_at | 1722 | 0.763 | 0.3418 | Yes | ||
29 | UNG | 1425753_a_at | 1740 | 0.755 | 0.3489 | Yes | ||
30 | HMGA1 | 1416184_s_at | 1893 | 0.703 | 0.3492 | Yes | ||
31 | CDC5L | 1428092_at 1460429_at | 1940 | 0.687 | 0.3543 | Yes | ||
32 | AK2 | 1448450_at 1448451_at | 2028 | 0.660 | 0.3571 | Yes | ||
33 | RQCD1 | 1450887_at | 2076 | 0.646 | 0.3617 | Yes | ||
34 | PCNA | 1417947_at | 2101 | 0.641 | 0.3672 | Yes | ||
35 | LIG1 | 1416641_at | 2126 | 0.633 | 0.3727 | Yes | ||
36 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 2184 | 0.618 | 0.3765 | Yes | ||
37 | MSH5 | 1430771_a_at 1449537_at | 2205 | 0.610 | 0.3820 | Yes | ||
38 | POLE2 | 1427094_at 1431440_at | 2223 | 0.606 | 0.3875 | Yes | ||
39 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 2620 | 0.521 | 0.3747 | No | ||
40 | STAG2 | 1421849_at 1450396_at | 2813 | 0.478 | 0.3709 | No | ||
41 | PRPS2 | 1420637_at 1420638_at 1443418_at 1454843_at | 2850 | 0.472 | 0.3741 | No | ||
42 | EIF4A1 | 1427058_at 1430980_a_at 1434985_a_at | 3047 | 0.442 | 0.3697 | No | ||
43 | MRPL40 | 1448849_at | 3077 | 0.437 | 0.3729 | No | ||
44 | SLC9A5 | 1420070_a_at 1455760_at | 3188 | 0.423 | 0.3723 | No | ||
45 | OLFML3 | 1448475_at | 3307 | 0.409 | 0.3711 | No | ||
46 | E2F3 | 1427462_at 1434564_at | 3343 | 0.405 | 0.3737 | No | ||
47 | MAP3K7 | 1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at | 3444 | 0.393 | 0.3732 | No | ||
48 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 3538 | 0.384 | 0.3729 | No | ||
49 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 3617 | 0.374 | 0.3732 | No | ||
50 | PIM1 | 1423006_at 1435458_at | 3779 | 0.357 | 0.3695 | No | ||
51 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 3843 | 0.350 | 0.3703 | No | ||
52 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 4049 | 0.333 | 0.3643 | No | ||
53 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 4253 | 0.317 | 0.3583 | No | ||
54 | NPR3 | 1435184_at 1448024_at 1450286_at | 4467 | 0.303 | 0.3517 | No | ||
55 | EPHB1 | 1455188_at | 4510 | 0.300 | 0.3528 | No | ||
56 | POLD1 | 1448187_at 1456055_x_at | 4661 | 0.290 | 0.3490 | No | ||
57 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 4712 | 0.286 | 0.3497 | No | ||
58 | MCM8 | 1429557_at | 4954 | 0.272 | 0.3414 | No | ||
59 | GPRC5B | 1424613_at 1451411_at | 5079 | 0.265 | 0.3385 | No | ||
60 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 5381 | 0.250 | 0.3272 | No | ||
61 | PKMYT1 | 1418481_at 1438601_at | 5674 | 0.234 | 0.3163 | No | ||
62 | FBXO5 | 1429499_at | 5792 | 0.230 | 0.3133 | No | ||
63 | BRMS1L | 1452850_s_at 1460443_at | 5955 | 0.222 | 0.3082 | No | ||
64 | LHX5 | 1420348_at | 6269 | 0.210 | 0.2960 | No | ||
65 | MCM3 | 1420029_at 1426653_at | 6514 | 0.200 | 0.2868 | No | ||
66 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 6539 | 0.199 | 0.2878 | No | ||
67 | CLSPN | 1441984_at 1456280_at | 7044 | 0.181 | 0.2665 | No | ||
68 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 7249 | 0.174 | 0.2590 | No | ||
69 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 7342 | 0.170 | 0.2565 | No | ||
70 | CORT | 1449820_at | 7450 | 0.167 | 0.2533 | No | ||
71 | PAQR4 | 1423101_at | 7684 | 0.159 | 0.2443 | No | ||
72 | SEMA6A | 1421414_a_at 1425903_at 1436458_at | 7965 | 0.150 | 0.2330 | No | ||
73 | PAPOLG | 1427241_at 1446307_at | 7979 | 0.149 | 0.2339 | No | ||
74 | SEZ6 | 1420885_a_at 1427674_a_at 1459972_x_at | 8317 | 0.139 | 0.2199 | No | ||
75 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 8486 | 0.134 | 0.2136 | No | ||
76 | PPM1D | 1434142_at 1449092_at 1459069_at | 8598 | 0.130 | 0.2098 | No | ||
77 | GABRB3 | 1421189_at 1421190_at 1435021_at | 8628 | 0.129 | 0.2098 | No | ||
78 | PCSK1 | 1421396_at | 8667 | 0.128 | 0.2094 | No | ||
79 | RET | 1421359_at | 8954 | 0.119 | 0.1975 | No | ||
80 | ARHGAP11A | 1438434_at | 9153 | 0.113 | 0.1896 | No | ||
81 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 9224 | 0.111 | 0.1875 | No | ||
82 | STMN1 | 1415849_s_at | 9641 | 0.098 | 0.1694 | No | ||
83 | MAT2A | 1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at | 10198 | 0.082 | 0.1447 | No | ||
84 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 10604 | 0.071 | 0.1269 | No | ||
85 | GATA1 | 1449232_at | 10714 | 0.067 | 0.1226 | No | ||
86 | FANCC | 1442265_at 1447632_at 1450861_at | 10825 | 0.064 | 0.1182 | No | ||
87 | PEG3 | 1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at | 11083 | 0.057 | 0.1070 | No | ||
88 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 11210 | 0.054 | 0.1017 | No | ||
89 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 11318 | 0.051 | 0.0974 | No | ||
90 | MDGA1 | 1432062_at | 11345 | 0.050 | 0.0967 | No | ||
91 | MAPT | 1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at | 11464 | 0.046 | 0.0917 | No | ||
92 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 11767 | 0.037 | 0.0783 | No | ||
93 | AP4M1 | 1418846_at | 11922 | 0.033 | 0.0715 | No | ||
94 | KLF4 | 1417394_at 1417395_at | 12105 | 0.027 | 0.0634 | No | ||
95 | IPO7 | 1442511_at 1454955_at 1458165_at | 12189 | 0.024 | 0.0599 | No | ||
96 | KCNS2 | 1421342_at 1441211_at 1457325_at | 12245 | 0.023 | 0.0576 | No | ||
97 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 12372 | 0.019 | 0.0520 | No | ||
98 | PODN | 1435180_at | 12669 | 0.011 | 0.0385 | No | ||
99 | SYNGR4 | 1418875_at | 12957 | 0.001 | 0.0253 | No | ||
100 | RASAL2 | 1436910_at 1444671_at | 13311 | -0.011 | 0.0092 | No | ||
101 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 13338 | -0.012 | 0.0082 | No | ||
102 | MSH2 | 1416988_at 1447888_x_at | 13508 | -0.018 | 0.0006 | No | ||
103 | ILF3 | 1422546_at 1436802_at 1460669_at | 13882 | -0.032 | -0.0162 | No | ||
104 | HS6ST3 | 1421599_at | 13926 | -0.033 | -0.0179 | No | ||
105 | RPS20 | 1456373_x_at 1456436_x_at | 14351 | -0.049 | -0.0368 | No | ||
106 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 14376 | -0.050 | -0.0374 | No | ||
107 | HCN3 | 1451023_at | 14379 | -0.050 | -0.0370 | No | ||
108 | NELL2 | 1423560_at 1423561_at | 14603 | -0.059 | -0.0466 | No | ||
109 | FHOD1 | 1435557_at | 14802 | -0.067 | -0.0550 | No | ||
110 | FMO4 | 1425799_at 1444852_at | 14834 | -0.068 | -0.0557 | No | ||
111 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 14848 | -0.069 | -0.0556 | No | ||
112 | HOXC10 | 1439798_at | 14855 | -0.069 | -0.0551 | No | ||
113 | KCNA6 | 1421568_at 1441049_at 1456954_at | 14879 | -0.070 | -0.0555 | No | ||
114 | CBX3 | 1432628_at 1454305_at | 14939 | -0.073 | -0.0574 | No | ||
115 | ZIM2 | 1432297_at | 15060 | -0.078 | -0.0621 | No | ||
116 | EED | 1448653_at | 15112 | -0.082 | -0.0636 | No | ||
117 | PRKDC | 1451576_at | 15265 | -0.089 | -0.0697 | No | ||
118 | MCM2 | 1434079_s_at 1448777_at | 15390 | -0.096 | -0.0744 | No | ||
119 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 15483 | -0.099 | -0.0776 | No | ||
120 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 15505 | -0.100 | -0.0775 | No | ||
121 | CCNT1 | 1419313_at 1456477_at | 15687 | -0.110 | -0.0847 | No | ||
122 | CDC6 | 1417019_a_at | 15905 | -0.122 | -0.0934 | No | ||
123 | TLE3 | 1419654_at 1419655_at 1449554_at 1458512_at | 16154 | -0.138 | -0.1033 | No | ||
124 | TYRO3 | 1425248_a_at 1425249_a_at | 16578 | -0.169 | -0.1210 | No | ||
125 | AP1S1 | 1416087_at | 16601 | -0.170 | -0.1202 | No | ||
126 | DNAJC5G | 1437814_at | 16663 | -0.177 | -0.1212 | No | ||
127 | ATAD2 | 1436174_at 1443146_at 1443229_at | 16665 | -0.177 | -0.1194 | No | ||
128 | ARID4A | 1436191_at 1438464_at 1456420_at | 16749 | -0.183 | -0.1213 | No | ||
129 | HNRPD | 1425142_a_at 1446083_at | 16786 | -0.186 | -0.1210 | No | ||
130 | ONECUT1 | 1421447_at 1450252_at 1456974_at | 16867 | -0.194 | -0.1227 | No | ||
131 | HNRPUL1 | 1451984_at | 17172 | -0.225 | -0.1343 | No | ||
132 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 17821 | -0.299 | -0.1610 | No | ||
133 | USP37 | 1434242_at 1438212_at | 17828 | -0.299 | -0.1582 | No | ||
134 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 17910 | -0.312 | -0.1586 | No | ||
135 | FANCG | 1420960_at | 17967 | -0.320 | -0.1579 | No | ||
136 | TBX6 | 1449868_at | 18194 | -0.351 | -0.1646 | No | ||
137 | SP3 | 1431804_a_at 1459360_at | 18430 | -0.383 | -0.1714 | No | ||
138 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 18448 | -0.386 | -0.1682 | No | ||
139 | YBX2 | 1420762_a_at | 18577 | -0.408 | -0.1698 | No | ||
140 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 18620 | -0.418 | -0.1674 | No | ||
141 | IL4I1 | 1419192_at | 18767 | -0.448 | -0.1694 | No | ||
142 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 18940 | -0.485 | -0.1723 | No | ||
143 | SLC25A14 | 1417154_at | 18976 | -0.494 | -0.1688 | No | ||
144 | ALDH6A1 | 1448104_at | 19132 | -0.529 | -0.1704 | No | ||
145 | MAZ | 1427099_at | 19156 | -0.534 | -0.1659 | No | ||
146 | PHC1 | 1423212_at | 19267 | -0.564 | -0.1651 | No | ||
147 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 19353 | -0.584 | -0.1629 | No | ||
148 | CASP8AP2 | 1449217_at | 19404 | -0.598 | -0.1590 | No | ||
149 | MXD3 | 1422970_at 1438847_at 1448878_at | 19438 | -0.605 | -0.1542 | No | ||
150 | MYH10 | 1441057_at 1452740_at | 19960 | -0.765 | -0.1702 | No | ||
151 | ACBD6 | 1452601_a_at 1453199_at | 20002 | -0.779 | -0.1640 | No | ||
152 | H2AFZ | 1441370_at | 20272 | -0.877 | -0.1672 | No | ||
153 | RTBDN | 1451603_at 1457331_at | 20315 | -0.898 | -0.1598 | No | ||
154 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 20398 | -0.933 | -0.1539 | No | ||
155 | USP52 | 1426700_a_at | 20584 | -1.037 | -0.1516 | No | ||
156 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 20881 | -1.246 | -0.1522 | No | ||
157 | ZCCHC8 | 1423755_at 1441639_at | 20886 | -1.249 | -0.1394 | No | ||
158 | PHF15 | 1430081_at 1455345_at | 21049 | -1.412 | -0.1322 | No | ||
159 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 21102 | -1.472 | -0.1193 | No | ||
160 | STK35 | 1431107_at 1439802_at | 21131 | -1.504 | -0.1049 | No | ||
161 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 21135 | -1.506 | -0.0894 | No | ||
162 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 21220 | -1.614 | -0.0764 | No | ||
163 | ZBTB4 | 1429722_at 1460488_at | 21239 | -1.645 | -0.0602 | No | ||
164 | E2F7 | 1437187_at | 21302 | -1.725 | -0.0451 | No | ||
165 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 21466 | -2.017 | -0.0316 | No | ||
166 | ID3 | 1416630_at | 21558 | -2.218 | -0.0127 | No | ||
167 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 21735 | -2.877 | 0.0091 | No |