Details for gene set V$COUP_DR1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$COUP_DR1_Q6
Enrichment Score (ES)	0.37809002
Normalized Enrichment Score (NES)	1.3596807
Nominal p-value	0.0
FDR q-value	0.27021876
FWER p-Value	0.997

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TOMM70A	1417192_at 1426675_at 1426676_s_at 1447239_at 1457353_at	118	2.784	0.0215	Yes
2	ABTB2	1433453_a_at 1433454_at 1443497_at 1444771_at	127	2.720	0.0475	Yes
3	SMYD5	1425479_at 1447749_at 1451722_s_at	150	2.594	0.0716	Yes
4	PEX16	1425021_a_at 1436253_at 1447801_x_at	182	2.464	0.0941	Yes
5	NR4A3	1421079_at 1421080_at	201	2.364	0.1162	Yes
6	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	262	2.149	0.1342	Yes
7	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	276	2.104	0.1540	Yes
8	HSPD1	1426351_at	323	1.927	0.1705	Yes
9	SLC11A2	1417584_at 1426441_at 1441709_at 1447333_at 1452078_a_at	519	1.576	0.1769	Yes
10	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	557	1.530	0.1900	Yes
11	APOM	1419095_a_at 1419096_at	609	1.458	0.2018	Yes
12	ID1	1425895_a_at	674	1.389	0.2123	Yes
13	FBLN1	1422540_at 1439688_at 1451119_a_at	703	1.357	0.2241	Yes
14	TREX1	1450672_a_at 1459618_at	728	1.332	0.2359	Yes
15	DPF3	1441659_at 1442686_at 1450162_at	740	1.317	0.2482	Yes
16	TCEA2	1418107_at 1440791_x_at	776	1.291	0.2591	Yes
17	DNAJA2	1417182_at 1417183_at 1429476_s_at 1457233_at	867	1.211	0.2667	Yes
18	TPCN1	1434930_at 1451771_at 1451772_at	959	1.141	0.2735	Yes
19	LAMP2	1416343_a_at 1416344_at 1428094_at 1434503_s_at	1034	1.096	0.2808	Yes
20	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	1143	1.033	0.2858	Yes
21	ENO3	1417951_at 1449631_at	1197	1.005	0.2931	Yes
22	MED8	1431423_a_at 1442417_at	1220	0.990	0.3017	Yes
23	UBE2R2	1415768_a_at 1443742_x_at 1444460_at	1231	0.985	0.3108	Yes
24	STOML2	1448774_at	1521	0.842	0.3056	Yes
25	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	1532	0.837	0.3133	Yes
26	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	1679	0.779	0.3141	Yes
27	CNTFR	1419429_at 1431663_a_at	1689	0.776	0.3212	Yes
28	MRPS28	1452585_at	1697	0.771	0.3284	Yes
29	PDLIM7	1417959_at 1428319_at 1443785_x_at	1961	0.680	0.3229	Yes
30	RQCD1	1450887_at	2076	0.646	0.3239	Yes
31	PAPD4	1419183_at 1433568_at	2137	0.631	0.3272	Yes
32	PALM	1422034_a_at 1423967_at 1439927_at 1457217_at	2143	0.629	0.3331	Yes
33	WBSCR16	1416622_at	2177	0.620	0.3376	Yes
34	NR2F1	1418157_at 1422412_x_at	2215	0.608	0.3418	Yes
35	NR2F6	1449846_at 1460647_a_at 1460648_at	2231	0.604	0.3469	Yes
36	NDUFS1	1425143_a_at 1453354_at	2233	0.603	0.3527	Yes
37	CKS1B	1416698_a_at 1439514_at 1448441_at 1456268_at	2273	0.595	0.3567	Yes
38	AHCYL1	1425576_at 1426830_a_at 1426831_at	2295	0.590	0.3614	Yes
39	CXCL14	1418456_a_at 1418457_at	2382	0.572	0.3630	Yes
40	HSPE1	1450668_s_at	2429	0.562	0.3664	Yes
41	PDZK1	1431701_a_at	2587	0.528	0.3643	Yes
42	HMGCS2	1423858_a_at 1431833_a_at	2655	0.513	0.3662	Yes
43	RNF139	1429425_at 1429426_at	2714	0.500	0.3683	Yes
44	TRAF4	1416571_at 1460642_at	2729	0.498	0.3725	Yes
45	REST	1425564_at 1425565_at 1428227_at	2741	0.495	0.3768	Yes
46	KIRREL3	1431402_at 1441357_at 1452728_at	2815	0.478	0.3781	Yes
47	SHC1	1422853_at 1422854_at	3459	0.392	0.3523	No
48	SAP18	1419443_at 1419444_at 1419445_s_at 1434646_s_at 1449480_at	3497	0.388	0.3544	No
49	STMN2	1423280_at 1423281_at	3532	0.384	0.3565	No
50	HOXD3	1421537_at 1437664_at	3818	0.352	0.3469	No
51	SCNM1	1428364_at	4016	0.335	0.3411	No
52	AGPS	1443797_at 1454918_at	4133	0.326	0.3389	No
53	HOXA3	1427433_s_at 1441070_at 1452421_at	4175	0.323	0.3401	No
54	ATP5O	1416278_a_at	4431	0.305	0.3314	No
55	FOXA1	1418496_at	4549	0.297	0.3289	No
56	FABP1	1417556_at 1448764_a_at	4592	0.294	0.3298	No
57	ZIC4	1421539_at 1456417_at	5095	0.264	0.3093	No
58	OBSCN	1443632_at	5163	0.260	0.3087	No
59	CRABP2	1451191_at	5341	0.252	0.3030	No
60	PTHR1	1417092_at	5457	0.246	0.3001	No
61	SS18	1419360_a_at 1419361_at 1436257_at 1458684_at	5517	0.242	0.2998	No
62	SLC26A3	1421445_at 1427547_a_at 1429467_s_at 1453151_at	5565	0.240	0.2999	No
63	CLCNKA	1450182_at	5823	0.228	0.2903	No
64	THPO	1449569_at	5860	0.227	0.2909	No
65	CYP26A1	1419430_at	6006	0.220	0.2863	No
66	EFEMP1	1427183_at	6130	0.215	0.2828	No
67	POLR2H	1424473_at	6184	0.213	0.2824	No
68	PRODH2	1432099_a_at	6789	0.190	0.2565	No
69	PRDM16	1429308_at 1429309_at 1440745_at 1440870_at 1443251_at	6970	0.183	0.2500	No
70	PNOC	1425892_a_at	7017	0.182	0.2496	No
71	CLSPN	1441984_at 1456280_at	7044	0.181	0.2502	No
72	PAPLN	1420521_at	7279	0.173	0.2411	No
73	NR2C1	1418605_at 1439490_at 1446194_at 1449157_at 1458338_x_at	7726	0.158	0.2221	No
74	WTAP	1438471_at 1452401_at 1454805_at	7778	0.156	0.2213	No
75	ATP2B1	1428936_at 1428937_at 1452969_at 1458346_x_at	7928	0.151	0.2159	No
76	SLC39A5	1429523_a_at	8209	0.142	0.2044	No
77	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8486	0.134	0.1930	No
78	MICAL2	1438726_at 1455685_at	8541	0.132	0.1918	No
79	RRBP1	1426123_a_at 1436660_at 1449221_a_at 1452767_at	8743	0.125	0.1838	No
80	CLDN15	1418920_at	8950	0.119	0.1755	No
81	PGF	1418471_at	9567	0.100	0.1481	No
82	NRAP	1421253_at	9603	0.099	0.1475	No
83	IRX6	1427383_at	9631	0.099	0.1472	No
84	DCTN2	1424461_at	9715	0.096	0.1443	No
85	SMAD3	1450471_at 1450472_s_at 1454960_at	9779	0.094	0.1423	No
86	EEF1B2	1448252_a_at	10092	0.085	0.1288	No
87	FOXA3	1431900_a_at	10636	0.070	0.1045	No
88	ALPI	1431077_at	10736	0.067	0.1006	No
89	PIPOX	1449374_at	10779	0.065	0.0993	No
90	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	10931	0.061	0.0930	No
91	EIF4EBP2	1417084_at 1436158_at 1437733_at 1455575_at 1456613_at	10978	0.060	0.0915	No
92	GDNF	1419080_at	11000	0.059	0.0911	No
93	SLC23A3	1460042_at	11440	0.047	0.0713	No
94	EFNB3	1423085_at	11597	0.042	0.0646	No
95	SALL1	1450489_at	11673	0.040	0.0615	No
96	ZBTB12	1436382_at	11685	0.040	0.0614	No
97	TTYH1	1422694_at 1422696_at 1426617_a_at	11707	0.039	0.0608	No
98	PRKCSH	1416339_a_at	11769	0.037	0.0584	No
99	FXYD1	1421374_a_at	12070	0.028	0.0449	No
100	F12	1420496_at	12229	0.023	0.0378	No
101	MAP2K3	1425456_a_at 1451714_a_at	12398	0.018	0.0303	No
102	ADAMTS19	1442459_at 1446513_at	12514	0.015	0.0251	No
103	SYTL2	1421594_a_at 1456593_at	12568	0.013	0.0228	No
104	PRDM1	1420425_at 1444997_at	12691	0.010	0.0173	No
105	LMO3	1455754_at	12797	0.007	0.0126	No
106	GLG1	1417087_at 1448579_at 1448580_at 1460554_s_at	12823	0.006	0.0115	No
107	PPP1R14D	1417990_at	13099	-0.004	-0.0011	No
108	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	13184	-0.007	-0.0049	No
109	FGD2	1419515_at	13335	-0.012	-0.0117	No
110	IBRDC2	1425282_at 1439153_at 1443252_at 1456834_at	13352	-0.012	-0.0123	No
111	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	13437	-0.016	-0.0160	No
112	LCAT	1417043_at	14041	-0.037	-0.0434	No
113	SLC16A9	1429726_at 1429727_at 1454104_a_at	14347	-0.049	-0.0569	No
114	GOLGA4	1417674_s_at 1448803_at 1460213_at	14493	-0.055	-0.0631	No
115	ERBB2	1424919_at	14627	-0.060	-0.0686	No
116	INSR	1421380_at 1450225_at	14980	-0.075	-0.0841	No
117	PRRX2	1432331_a_at	15086	-0.080	-0.0881	No
118	LRP1	1442849_at 1448655_at	15680	-0.109	-0.1143	No
119	POU5F1	1417945_at	15758	-0.114	-0.1167	No
120	GPR124	1418379_s_at	15913	-0.123	-0.1226	No
121	ZSWIM3	1428313_at 1444571_at 1457785_at	15947	-0.125	-0.1229	No
122	ASXL1	1434561_at 1435077_at 1458380_at	16231	-0.144	-0.1346	No
123	PRKCD	1422847_a_at 1442256_at	16427	-0.157	-0.1420	No
124	BIN3	1417691_at	16443	-0.158	-0.1412	No
125	HOXC13	1425874_at	16495	-0.162	-0.1419	No
126	TNRC4	1452851_at	16569	-0.168	-0.1437	No
127	CSF2	1427429_at	16572	-0.169	-0.1421	No
128	HSD17B8	1454987_a_at	16613	-0.171	-0.1423	No
129	KLK6	1448982_at	16686	-0.179	-0.1439	No
130	OVOL1	1419051_at 1419052_at	16842	-0.191	-0.1491	No
131	PRKACA	1447720_x_at 1450519_a_at	16859	-0.193	-0.1480	No
132	PAX7	1444596_at 1452510_at	16924	-0.199	-0.1490	No
133	RREB1	1428657_at 1434741_at 1438216_at 1442047_at 1452862_at	17073	-0.214	-0.1538	No
134	CLCN2	1449248_at	17197	-0.227	-0.1572	No
135	SYMPK	1428673_at	17332	-0.242	-0.1610	No
136	MAGMAS	1416765_s_at	17393	-0.249	-0.1614	No
137	MRPL11	1417918_at 1437131_x_at 1437839_x_at 1438080_at	17448	-0.254	-0.1614	No
138	GBL	1415842_at 1415843_at	17464	-0.256	-0.1596	No
139	KCNE1L	1416640_at	17546	-0.267	-0.1607	No
140	SLC26A6	1416275_at	17615	-0.275	-0.1612	No
141	SFRS4	1448778_at	17648	-0.278	-0.1600	No
142	PKP3	1418831_at 1418832_at	17754	-0.291	-0.1620	No
143	USP37	1434242_at 1438212_at	17828	-0.299	-0.1624	No
144	NCDN	1416852_a_at 1416853_at	17884	-0.307	-0.1620	No
145	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	18287	-0.365	-0.1769	No
146	PFN1	1449018_at	18536	-0.403	-0.1844	No
147	PAK4	1428548_at	18553	-0.405	-0.1812	No
148	PRKAG1	1417690_at 1433533_x_at 1457803_at	18572	-0.408	-0.1781	No
149	YBX2	1420762_a_at	18577	-0.408	-0.1743	No
150	APEX2	1424322_at 1425954_a_at	18637	-0.421	-0.1730	No
151	COMMD3	1433539_at 1454642_a_at	18792	-0.454	-0.1757	No
152	ESRRA	1442864_at 1460652_at	19001	-0.499	-0.1804	No
153	AGPAT1	1421024_at 1421025_at	19049	-0.510	-0.1776	No
154	DCTN1	1422521_at 1435414_s_at	19102	-0.521	-0.1749	No
155	GABARAPL2	1423187_at 1441376_at 1444956_at 1459477_at	19131	-0.528	-0.1711	No
156	ARHGEF7	1424482_at 1449066_a_at	19372	-0.590	-0.1764	No
157	AP1B1	1416279_at	19482	-0.615	-0.1755	No
158	ACTA1	1427735_a_at	19508	-0.620	-0.1706	No
159	SCOTIN	1423986_a_at 1437503_a_at	19580	-0.640	-0.1677	No
160	HDAC11	1451229_at 1454803_a_at	19584	-0.641	-0.1616	No
161	MAP3K11	1450669_at	19613	-0.647	-0.1567	No
162	MYH10	1441057_at 1452740_at	19960	-0.765	-0.1651	No
163	PCTK1	1415956_a_at 1438314_at 1443296_at 1460169_a_at	20213	-0.853	-0.1685	No
164	RNF5	1422888_at	20268	-0.876	-0.1625	No
165	ZYX	1417240_at 1438552_x_at	20494	-0.981	-0.1633	No
166	TTR	1451580_a_at 1454608_x_at 1455913_x_at 1459737_s_at	20505	-0.988	-0.1542	No
167	USP52	1426700_a_at	20584	-1.037	-0.1477	No
168	ARF6	1418822_a_at 1418823_at 1418824_at	20682	-1.104	-0.1415	No
169	ETFDH	1451084_at 1458152_at	20855	-1.221	-0.1376	No
170	RFX1	1422109_at 1436059_at	20879	-1.243	-0.1266	No
171	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20881	-1.246	-0.1146	No
172	LMAN2L	1435475_at 1441295_at	21015	-1.369	-0.1074	No
173	NR4A1	1416505_at	21368	-1.829	-0.1059	No
174	TOM1L2	1425659_at 1434385_at 1437915_at 1441586_at 1451795_at	21556	-2.213	-0.0930	No
175	HIBADH	1423780_at 1435967_s_at 1442848_at 1446297_at	21610	-2.375	-0.0725	No
176	GBF1	1415709_s_at 1415757_at 1432677_at 1438207_at	21611	-2.381	-0.0494	No
177	HIP2	1417186_at 1417187_at 1417188_s_at 1441012_at 1442671_at 1443148_at 1444212_at	21647	-2.473	-0.0271	No
178	PSMF1	1424369_at 1424370_s_at 1424371_at 1451337_at	21890	-4.152	0.0020	No