Details for gene set V$BRN2

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$BRN2_01
Enrichment Score (ES)	-0.47991085
Normalized Enrichment Score (NES)	-1.5953187
Nominal p-value	0.0015479876
FDR q-value	0.068596385
FWER p-Value	0.551

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DIABLO	1417683_at 1425768_at	115	2.808	0.0218	No
2	NR4A3	1421079_at 1421080_at	201	2.364	0.0407	No
3	VGLL1	1421607_at	392	1.780	0.0491	No
4	NDUFB8	1448198_a_at 1458404_at	730	1.328	0.0464	No
5	SNTB2	1420371_at 1420372_at 1436986_at 1449840_at	787	1.280	0.0562	No
6	ETV5	1420998_at 1428142_at 1450082_s_at	848	1.227	0.0653	No
7	BAZ1A	1433599_at 1447930_at	1169	1.017	0.0604	No
8	INPPL1	1460394_a_at	1173	1.015	0.0700	No
9	TUFT1	1416689_at 1444694_at	1188	1.010	0.0791	No
10	EHD4	1449852_a_at	1836	0.721	0.0563	No
11	RHOJ	1418892_at 1444982_at	1884	0.706	0.0610	No
12	NFATC4	1423380_s_at 1432821_at 1454369_a_at	2178	0.620	0.0535	No
13	CS	1422577_at 1422578_at 1450667_a_at	2243	0.602	0.0564	No
14	H3F3B	1420376_a_at 1430357_at 1455725_a_at	2247	0.601	0.0620	No
15	DLX1	1449470_at	2279	0.594	0.0663	No
16	IL18RAP	1421291_at 1456545_at	2480	0.549	0.0624	No
17	TCF4	1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at	2552	0.535	0.0643	No
18	SPRY4	1422020_at 1422021_at 1440867_at 1445669_at	2944	0.459	0.0508	No
19	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	3047	0.442	0.0503	No
20	CCND1	1417419_at 1417420_at 1448698_at	3060	0.439	0.0540	No
21	NR3C2	1435991_at 1440306_at 1442533_at	3249	0.417	0.0494	No
22	ELMO1	1424523_at 1446610_at 1450208_a_at	3445	0.393	0.0442	No
23	IMPDH2	1415851_a_at 1415852_at	3467	0.391	0.0470	No
24	EXTL2	1422538_at 1422539_at	3481	0.389	0.0502	No
25	STMN2	1423280_at 1423281_at	3532	0.384	0.0516	No
26	KCNMB2	1426322_a_at 1431844_at	3732	0.361	0.0459	No
27	PIM1	1423006_at 1435458_at	3779	0.357	0.0472	No
28	CNN3	1426724_at 1436759_x_at 1436836_x_at 1438354_x_at 1455570_x_at 1456380_x_at	3812	0.353	0.0492	No
29	NEUROG1	1438551_at 1450836_at	3863	0.348	0.0502	No
30	PTPRG	1447906_at 1450122_at	4083	0.330	0.0433	No
31	RHEBL1	1447818_x_at 1451516_at	4105	0.328	0.0455	No
32	FGFR2	1420847_a_at 1433489_s_at 1443996_at	4125	0.327	0.0478	No
33	PTHLH	1422324_a_at 1427527_a_at	4161	0.324	0.0493	No
34	IMMT	1429533_at 1429534_a_at 1433470_a_at 1437126_at	4185	0.322	0.0514	No
35	NOG	1422300_at	4634	0.292	0.0336	No
36	HOXD4	1450209_at	4759	0.283	0.0306	No
37	PPP1R1B	1451331_at	4839	0.279	0.0297	No
38	PTPRO	1417676_a_at 1425863_a_at 1457771_at	4860	0.278	0.0314	No
39	NR2E1	1434921_at 1457289_at	4951	0.272	0.0299	No
40	SOX3	1435192_at 1450485_at	4995	0.270	0.0306	No
41	STX11	1423576_a_at 1451032_at 1453228_at 1457780_at	5166	0.260	0.0253	No
42	FLRT3	1429310_at 1453102_at	5505	0.243	0.0121	No
43	PRICKLE2	1428808_at	5519	0.242	0.0138	No
44	ODZ1	1421508_at	5782	0.230	0.0040	No
45	SMOC2	1415935_at 1431362_a_at	6044	0.219	-0.0059	No
46	COVA1	1427043_s_at 1451657_a_at	6088	0.217	-0.0058	No
47	CIB3	1444438_at	6165	0.214	-0.0072	No
48	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6484	0.201	-0.0199	No
49	NCAM2	1421592_at 1421593_at 1425301_at 1459116_at	6582	0.197	-0.0225	No
50	ERG	1425370_a_at 1440244_at	6624	0.196	-0.0225	No
51	MYF5	1420757_at	6823	0.189	-0.0297	No
52	CREB5	1440089_at 1442576_at 1457222_at	6831	0.188	-0.0282	No
53	FGF10	1420690_at	6833	0.188	-0.0265	No
54	RPE65	1450197_at	6878	0.186	-0.0267	No
55	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	6898	0.186	-0.0258	No
56	GPR3	1460275_at	6994	0.183	-0.0284	No
57	SLITRK1	1428089_at	7001	0.182	-0.0269	No
58	MDM1	1445709_at 1451053_a_at	7329	0.171	-0.0403	No
59	HOXB3	1427605_at 1456229_at	7368	0.169	-0.0404	No
60	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	7372	0.169	-0.0389	No
61	EVI1	1423011_at 1438325_at	7541	0.164	-0.0450	No
62	DUSP10	1417163_at 1417164_at	7640	0.161	-0.0480	No
63	MYT1	1422773_at 1439365_at	7734	0.158	-0.0507	No
64	TPH2	1435314_at	7838	0.154	-0.0540	No
65	PHF3	1420119_s_at 1428998_at 1428999_at 1429000_at 1438070_at 1442173_at 1452441_at 1456115_at	8262	0.140	-0.0721	No
66	HOXC4	1422870_at	8342	0.138	-0.0744	No
67	MMP16	1422626_at 1437568_at 1440161_at 1443412_s_at	8379	0.137	-0.0747	No
68	HOXB9	1452317_at	8475	0.134	-0.0778	No
69	PDZRN4	1456512_at	8792	0.124	-0.0911	No
70	FGFR3	1421841_at 1425796_a_at	8906	0.120	-0.0952	No
71	NPAS2	1421036_at 1421037_at	8952	0.119	-0.0961	No
72	MYH2	1425153_at	9098	0.114	-0.1016	No
73	VAX1	1421774_at	9504	0.102	-0.1193	No
74	GPM6A	1426442_at 1456741_s_at 1459303_at	9690	0.097	-0.1268	No
75	IRX4	1419539_at	9850	0.092	-0.1333	No
76	ASB11	1422153_a_at	10182	0.082	-0.1477	No
77	ADCYAP1	1423427_at 1441778_at	10344	0.078	-0.1543	No
78	NDST3	1443277_at 1453777_a_at	10503	0.074	-0.1609	No
79	AGTPBP1	1429933_at 1432385_a_at	10517	0.073	-0.1608	No
80	NTF3	1434802_s_at 1450803_at	10536	0.073	-0.1609	No
81	UBL3	1423461_a_at	10567	0.072	-0.1616	No
82	AAK1	1420026_at 1435038_s_at 1441782_at	10729	0.067	-0.1683	No
83	STEAP2	1428636_at 1438773_at 1442359_at 1444290_at 1446071_at	10968	0.060	-0.1787	No
84	EYA1	1421727_at 1443117_at 1457424_at	10984	0.060	-0.1788	No
85	GDNF	1419080_at	11000	0.059	-0.1789	No
86	RAI17	1435740_at 1441823_at 1444505_at 1455984_at 1456816_at 1459305_at	11010	0.059	-0.1788	No
87	SLC6A4	1417150_at	11422	0.048	-0.1972	No
88	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	11644	0.041	-0.2070	No
89	PDCD8	1418127_a_at	11651	0.041	-0.2068	No
90	SALL1	1450489_at	11673	0.040	-0.2074	No
91	PHLDA2	1417837_at	11698	0.039	-0.2081	No
92	RGS6	1427340_at 1452399_at	11882	0.034	-0.2162	No
93	PHOX2B	1422232_at 1455907_x_at	11889	0.034	-0.2162	No
94	DCX	1418139_at 1418140_at 1418141_at 1448974_at	11947	0.032	-0.2185	No
95	RAB8B	1426799_at 1446103_at	12036	0.029	-0.2223	No
96	NFIA	1421162_a_at 1421163_a_at 1427733_a_at 1438236_at 1440660_at 1441547_at 1446742_at 1446990_at 1456087_at 1459431_at	12110	0.027	-0.2254	No
97	ELL	1441928_x_at 1460643_at	12233	0.023	-0.2307	No
98	GLRA2	1434098_at 1443351_at	12310	0.021	-0.2340	No
99	ANLN	1433543_at 1439648_at	12563	0.013	-0.2455	No
100	HOXA10	1431475_a_at 1446408_at	12570	0.013	-0.2456	No
101	CLOCK	1418659_at 1435775_at 1439314_at	12650	0.011	-0.2492	No
102	ACCN1	1417994_a_at	12802	0.006	-0.2560	No
103	COL12A1	1427391_a_at 1445751_at	12960	0.001	-0.2632	No
104	CTNNBIP1	1417567_at 1431694_a_at	13207	-0.008	-0.2745	No
105	EDNRA	1433525_at 1440093_at 1451691_at 1460513_a_at	13391	-0.014	-0.2828	No
106	FOSL1	1417487_at 1417488_at	13609	-0.021	-0.2925	No
107	PDGFC	1419123_a_at 1449351_s_at	13972	-0.035	-0.3088	No
108	NRAS	1422688_a_at 1454060_a_at	14084	-0.039	-0.3136	No
109	SALL3	1441186_at 1452386_at	14086	-0.040	-0.3132	No
110	PCDH18	1422889_at 1422890_at 1430427_a_at	14124	-0.041	-0.3145	No
111	LAMA4	1424807_at 1424808_at	14174	-0.043	-0.3164	No
112	SULF1	1436319_at 1438200_at 1446416_at 1457402_at	14621	-0.060	-0.3363	No
113	GPX1	1460671_at	14878	-0.070	-0.3474	No
114	ADAM11	1450248_at	15626	-0.106	-0.3807	No
115	ETV4	1423232_at 1443381_at	15791	-0.115	-0.3871	No
116	MGLL	1426785_s_at 1431331_at 1450391_a_at 1453836_a_at	16157	-0.138	-0.4026	No
117	NT5C1B	1427715_a_at	16243	-0.144	-0.4051	No
118	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	16314	-0.150	-0.4069	No
119	GNAO1	1421152_a_at 1448031_at 1460383_at	16352	-0.153	-0.4071	No
120	USP32	1430403_at 1436159_at 1439857_at 1440399_at 1443689_at 1459857_at	16411	-0.156	-0.4082	No
121	ARHGEF12	1423902_s_at 1446965_at 1451159_at 1453853_a_at	16622	-0.173	-0.4162	No
122	SLC26A7	1425841_at	16738	-0.182	-0.4198	No
123	MYO1B	1427450_x_at 1441210_at 1447364_x_at 1448989_a_at 1448990_a_at 1458007_at 1459679_s_at	17062	-0.213	-0.4326	No
124	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	17203	-0.227	-0.4368	No
125	RPE	1416705_at 1416706_at 1448444_at	17261	-0.233	-0.4372	No
126	CUTL1	1424667_a_at 1424668_a_at 1425611_a_at 1425612_at 1434683_at 1437686_x_at 1440465_at 1447295_at 1451435_at	17283	-0.236	-0.4359	No
127	PLEC1	1419835_s_at 1434610_at 1437554_at	17722	-0.287	-0.4532	No
128	ITGB3BP	1420665_at 1442993_at 1449953_at 1456097_a_at	17943	-0.318	-0.4603	No
129	PTPRCAP	1448511_at	18080	-0.335	-0.4633	No
130	CHN2	1428573_at 1428574_a_at 1441158_at 1443626_at	18166	-0.348	-0.4638	No
131	IQGAP3	1434850_at 1459405_at	18192	-0.351	-0.4616	No
132	SNAP25	1416828_at 1443398_at	18346	-0.372	-0.4650	No
133	ANGPT1	1421441_at 1438936_s_at 1438937_x_at 1439066_at 1446656_at 1450717_at 1457381_at	18528	-0.401	-0.4695	No
134	BAMBI	1423753_at	18532	-0.402	-0.4658	No
135	PRKAG1	1417690_at 1433533_x_at 1457803_at	18572	-0.408	-0.4636	No
136	PLCB2	1452481_at	18698	-0.433	-0.4652	No
137	POLR3B	1443466_s_at 1443494_at 1452949_at 1457345_at	18851	-0.464	-0.4677	No
138	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	19017	-0.502	-0.4704	No
139	EAF1	1431065_at 1433555_at	19032	-0.507	-0.4662	No
140	BCOR	1428773_s_at 1429438_at 1452910_at	19210	-0.547	-0.4691	No
141	CHD6	1427384_at 1431047_at	19324	-0.580	-0.4687	No
142	HOOK1	1438018_at 1439173_at	19546	-0.631	-0.4727	No
143	UNC13D	1428992_at	19597	-0.644	-0.4688	No
144	TAZ	1416207_at 1453785_at	19839	-0.721	-0.4730	Yes
145	SLIT3	1427086_at 1452296_at	19915	-0.748	-0.4692	Yes
146	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	20038	-0.794	-0.4671	Yes
147	ESRRG	1421747_at 1455267_at 1457896_at	20083	-0.812	-0.4613	Yes
148	CTNNA1	1437275_at 1437807_x_at 1443662_at 1448149_at	20114	-0.822	-0.4548	Yes
149	FOS	1423100_at	20292	-0.887	-0.4544	Yes
150	KLF12	1439846_at 1439847_s_at 1441040_at 1455521_at	20350	-0.912	-0.4482	Yes
151	CPNE1	1433439_at	20367	-0.916	-0.4401	Yes
152	PPP1R16B	1425414_at 1455080_at	20443	-0.953	-0.4344	Yes
153	SIPA1	1416206_at	20641	-1.074	-0.4331	Yes
154	ARF6	1418822_a_at 1418823_at 1418824_at	20682	-1.104	-0.4243	Yes
155	MSI2	1421230_a_at 1421231_at 1435520_at 1435521_at 1436818_a_at 1441185_at 1441373_at 1443008_at 1443530_at 1446022_at 1458136_at 1458542_at	20741	-1.142	-0.4159	Yes
156	IHPK2	1428373_at 1435319_at	20773	-1.165	-0.4061	Yes
157	FGF14	1435747_at 1447221_x_at 1447480_at 1449958_a_at 1458830_at 1459073_x_at	20785	-1.172	-0.3953	Yes
158	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20881	-1.246	-0.3877	Yes
159	TACC2	1425745_a_at 1447891_at	20987	-1.338	-0.3796	Yes
160	CBL	1434829_at 1446608_at 1450457_at 1455886_at	21039	-1.405	-0.3684	Yes
161	MBNL2	1433754_at 1436858_at 1446475_at 1455827_at 1457237_at 1457477_at	21048	-1.411	-0.3552	Yes
162	ZBTB9	1429125_at	21159	-1.536	-0.3454	Yes
163	TOB1	1423176_at 1440844_at	21205	-1.593	-0.3321	Yes
164	HIVEP1	1422742_at	21211	-1.603	-0.3169	Yes
165	SLCO3A1	1418030_at 1434537_at 1448918_at	21220	-1.614	-0.3017	Yes
166	SHH	1427571_at 1436869_at	21327	-1.768	-0.2895	Yes
167	RIT1	1420540_a_at 1428710_at	21383	-1.849	-0.2742	Yes
168	DUSP6	1415834_at	21419	-1.924	-0.2573	Yes
169	PIK3CG	1422707_at 1422708_at	21456	-1.994	-0.2397	Yes
170	UBE1	1442767_s_at 1448116_at	21612	-2.386	-0.2238	Yes
171	OSBPL7	1428893_at 1459966_at	21633	-2.433	-0.2013	Yes
172	TEF	1424175_at 1438033_at 1450184_s_at	21634	-2.438	-0.1778	Yes
173	PPM1B	1425330_a_at 1426382_at 1441479_at 1451669_at	21748	-2.929	-0.1547	Yes
174	BCL9	1445859_at 1446767_at 1451574_at 1455565_at	21776	-3.077	-0.1263	Yes
175	FGF13	1418497_at 1418498_at	21794	-3.160	-0.0966	Yes
176	ITK	1417171_at 1430833_at 1452518_a_at 1456836_at 1457120_at	21837	-3.479	-0.0650	Yes
177	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	21851	-3.587	-0.0310	Yes
178	CBFB	1442617_at 1460716_a_at	21854	-3.603	0.0037	Yes