Details for gene set V$AP2

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AP2_Q6
Enrichment Score (ES)	-0.4791521
Normalized Enrichment Score (NES)	-1.5897188
Nominal p-value	0.0
FDR q-value	0.06472897
FWER p-Value	0.574

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SDC1	1415943_at 1415944_at 1437279_x_at 1448158_at	34	3.770	0.0329	No
2	WNT7A	1423367_at 1447647_at 1458334_at	301	1.984	0.0389	No
3	ARHGAP5	1423194_at 1450896_at 1450897_at 1457410_at	343	1.896	0.0543	No
4	SHB	1434153_at	599	1.473	0.0561	No
5	MAPK6	1419168_at 1419169_at 1429963_at 1459146_at	794	1.272	0.0588	No
6	EBAG9	1422669_at	1154	1.027	0.0517	No
7	CDC25A	1417131_at 1417132_at 1445995_at	1166	1.019	0.0605	No
8	SFXN2	1439966_x_at 1440786_x_at	1275	0.963	0.0644	No
9	ORC6L	1417037_at	1336	0.926	0.0701	No
10	PPP6C	1424346_at 1424347_at	1363	0.914	0.0773	No
11	VPS35	1415783_at 1415784_at	1812	0.729	0.0633	No
12	PPM1E	1434990_at 1445741_at	1885	0.706	0.0665	No
13	IGFBP7	1423584_at 1437804_at	1898	0.702	0.0724	No
14	CDK8	1460389_at	2013	0.665	0.0732	No
15	EXOSC8	1420115_at 1428291_at 1449738_s_at	2084	0.644	0.0759	No
16	SP4	1421504_at 1437508_at	2300	0.589	0.0714	No
17	MAPRE1	1422764_at 1422765_at 1428819_at 1428820_at 1450740_a_at	2341	0.582	0.0749	No
18	HDLBP	1415987_at 1415988_at 1419806_at 1419869_s_at 1443546_at 1449615_s_at	2454	0.556	0.0748	No
19	RCOR2	1417302_at	2539	0.537	0.0759	No
20	CNNM4	1421635_at 1431233_at	2565	0.532	0.0796	No
21	RASA1	1426476_at 1426477_at 1426478_at 1438998_at	2641	0.515	0.0809	No
22	STAG2	1421849_at 1450396_at	2813	0.478	0.0774	No
23	FAF1	1418242_at 1434370_s_at	2867	0.470	0.0793	No
24	LHX2	1418317_at	2879	0.468	0.0830	No
25	H1F0	1423702_at 1450522_a_at	3085	0.436	0.0776	No
26	MAST2	1417324_at 1440321_at 1441847_at 1444813_at 1456927_at 1459558_at	3215	0.421	0.0755	No
27	E2F3	1427462_at 1434564_at	3343	0.405	0.0734	No
28	CENPB	1426051_a_at 1435944_s_at	3468	0.391	0.0713	No
29	HPN	1420712_a_at	3708	0.363	0.0636	No
30	ZDHHC14	1423668_at 1437614_x_at 1437616_x_at 1438151_x_at 1438619_x_at 1438975_x_at	3718	0.363	0.0665	No
31	ATP5G2	1415980_at 1456128_at	3740	0.360	0.0688	No
32	CRLF1	1418476_at	3754	0.359	0.0715	No
33	MBD3	1417728_at	3798	0.354	0.0728	No
34	WNT1	1425377_at	4313	0.313	0.0520	No
35	KCNN2	1445676_at 1448927_at	4441	0.304	0.0490	No
36	EPHB1	1455188_at	4510	0.300	0.0486	No
37	GALNT14	1453630_at	4673	0.289	0.0438	No
38	CRK	1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at	4804	0.281	0.0404	No
39	RASIP1	1428016_a_at	5160	0.261	0.0265	No
40	CREB3L1	1419295_at	5306	0.254	0.0221	No
41	ANGPTL2	1421002_at 1431848_at	5691	0.234	0.0066	No
42	BSN	1422023_at 1436123_at 1450467_at	5897	0.225	-0.0007	No
43	ACTR1A	1415873_a_at 1458696_at 1459855_x_at	5952	0.222	-0.0012	No
44	FZD5	1422937_at 1430809_at	6250	0.210	-0.0129	No
45	WDR12	1417270_at 1448646_at 1459762_x_at	6331	0.207	-0.0147	No
46	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	6539	0.199	-0.0224	No
47	PLCB3	1448661_at	6579	0.197	-0.0224	No
48	NRG1	1456524_at	6603	0.197	-0.0216	No
49	GPC4	1421088_at 1436514_at 1443620_at	6737	0.192	-0.0260	No
50	SPATA6	1418650_at 1418651_at 1438023_at 1445355_at	6870	0.187	-0.0304	No
51	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	6898	0.186	-0.0299	No
52	APLP1	1416134_at 1435857_s_at	6902	0.186	-0.0283	No
53	SOX12	1439754_at 1455562_at 1456882_at	6974	0.183	-0.0299	No
54	GPR3	1460275_at	6994	0.183	-0.0291	No
55	ARPC1A	1416079_a_at	7445	0.167	-0.0483	No
56	GRK5	1446361_at 1446998_at 1449514_at	7589	0.163	-0.0534	No
57	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	7718	0.158	-0.0578	No
58	POU2F1	1419716_a_at 1427695_a_at 1427835_at	7929	0.151	-0.0661	No
59	EFEMP2	1417018_at 1447668_x_at	7996	0.149	-0.0677	No
60	FKBP14	1433481_at 1458225_at	8570	0.131	-0.0929	No
61	COL11A2	1423578_at	8699	0.127	-0.0976	No
62	RRBP1	1426123_a_at 1436660_at 1449221_a_at 1452767_at	8743	0.125	-0.0984	No
63	SFRP2	1448201_at	9099	0.114	-0.1137	No
64	WFDC3	1430224_at 1460012_at	9485	0.103	-0.1305	No
65	VEGFB	1451803_a_at	9583	0.100	-0.1340	No
66	INSM1	1421399_at 1455865_at	9589	0.100	-0.1333	No
67	HCN1	1450193_at	9771	0.095	-0.1408	No
68	UBE2B	1423106_at 1423107_at 1430177_at 1439477_at 1460132_at	9787	0.094	-0.1406	No
69	ZDHHC2	1452655_at 1452656_at 1453481_at 1457204_at	9924	0.090	-0.1460	No
70	TERF2	1421147_at 1455651_at 1459650_at	10071	0.086	-0.1519	No
71	KCNH5	1441742_at	10199	0.082	-0.1570	No
72	GATA6	1425463_at 1425464_at 1443081_at	10355	0.078	-0.1634	No
73	SLC30A5	1422497_at	10469	0.075	-0.1680	No
74	PITX3	1449917_at	10621	0.070	-0.1743	No
75	ANKRD27	1425112_at 1454717_at	10840	0.063	-0.1837	No
76	GATA2	1428816_a_at 1450333_a_at	11018	0.059	-0.1913	No
77	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	11644	0.041	-0.2197	No
78	SALL1	1450489_at	11673	0.040	-0.2206	No
79	TRIM28	1415869_a_at 1456308_x_at	12351	0.020	-0.2515	No
80	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	12487	0.016	-0.2576	No
81	MAPRE3	1427079_at	12532	0.014	-0.2595	No
82	LMX1A	1421554_at	12778	0.007	-0.2707	No
83	SOX2	1416967_at	13135	-0.005	-0.2870	No
84	RASAL2	1436910_at 1444671_at	13311	-0.011	-0.2949	No
85	HS3ST3B1	1421331_at 1421332_at 1433977_at 1442816_at 1444055_at	13336	-0.012	-0.2959	No
86	SLC7A10	1421093_at	13459	-0.016	-0.3014	No
87	DUSP15	1426189_at 1435126_at	13765	-0.027	-0.3151	No
88	WNT3	1450763_x_at	13966	-0.034	-0.3240	No
89	PDGFB	1450413_at 1450414_at	14340	-0.049	-0.3407	No
90	HMGN2	1433507_a_at	14417	-0.051	-0.3437	No
91	C1ORF24	1422567_at 1454942_at	14473	-0.054	-0.3458	No
92	ZZZ3	1434332_at 1438487_s_at 1441748_at	14629	-0.060	-0.3523	No
93	FMNL1	1445636_at 1450212_at	14787	-0.067	-0.3590	No
94	CNNM2	1423475_at 1451007_at 1458132_at	14917	-0.071	-0.3642	No
95	GUCY1A2	1459336_at	14941	-0.073	-0.3646	No
96	CREB3	1419979_s_at 1424740_at 1424741_s_at	15001	-0.075	-0.3666	No
97	HCST	1419119_at	15096	-0.081	-0.3702	No
98	ICA1	1417901_a_at 1431644_a_at	15384	-0.095	-0.3825	No
99	BCL2	1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at	15400	-0.096	-0.3824	No
100	ARID1A	1447104_at	15459	-0.098	-0.3841	No
101	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	15606	-0.105	-0.3899	No
102	SLC25A12	1428440_at 1444489_at	15621	-0.106	-0.3895	No
103	TEAD2	1448519_at	15739	-0.112	-0.3939	No
104	NXPH3	1419710_at	15794	-0.115	-0.3953	No
105	CRBN	1423094_at 1423095_s_at 1455734_at	15819	-0.117	-0.3953	No
106	LHX1	1421951_at 1450428_at	15825	-0.118	-0.3945	No
107	GAS7	1417859_at 1431400_a_at 1445685_at	15857	-0.119	-0.3948	No
108	SLC25A28	1424776_a_at	16036	-0.131	-0.4018	No
109	MMD	1423488_at 1423489_at	16321	-0.150	-0.4135	No
110	APBA1	1437940_at 1455369_at 1459605_at	16334	-0.151	-0.4127	No
111	SPTBN4	1425116_a_at	16609	-0.171	-0.4237	No
112	WAC	1437426_at 1439249_at 1444241_at 1451494_at 1451495_at 1457559_at 1458471_at	16629	-0.174	-0.4230	No
113	FGF11	1421793_at 1439959_at	16760	-0.184	-0.4273	No
114	SIRT1	1418640_at 1458538_at	17144	-0.222	-0.4428	No
115	CDK9	1417269_at 1457240_at	17394	-0.249	-0.4520	No
116	MAFB	1451715_at 1451716_at	17440	-0.254	-0.4518	No
117	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	17505	-0.261	-0.4523	No
118	SUFU	1420848_at 1431713_at 1440004_at 1446489_at	17811	-0.297	-0.4636	No
119	USP48	1419277_at 1419278_at 1424056_at	17860	-0.303	-0.4630	No
120	UBTF	1453097_a_at 1455490_at 1460304_a_at	17864	-0.304	-0.4604	No
121	HOXB2	1444204_at 1449397_at	18273	-0.363	-0.4758	Yes
122	CBX6	1424407_s_at 1429290_at	18307	-0.367	-0.4740	Yes
123	PDE5A	1445963_at 1455970_at	18366	-0.374	-0.4732	Yes
124	GLTP	1419027_s_at	18400	-0.379	-0.4713	Yes
125	SP3	1431804_a_at 1459360_at	18430	-0.383	-0.4691	Yes
126	MTA2	1423165_a_at	18509	-0.398	-0.4690	Yes
127	RAB35	1433922_at	18522	-0.400	-0.4659	Yes
128	MYADM	1423321_at 1439389_s_at	18529	-0.401	-0.4625	Yes
129	MNT	1418192_at	18571	-0.408	-0.4607	Yes
130	FBXL11	1435329_at 1443336_at 1444358_at 1455942_at 1458449_at	18689	-0.432	-0.4621	Yes
131	PPFIA1	1435861_at 1455478_at	18722	-0.438	-0.4596	Yes
132	CTCF	1418330_at 1449042_at	18744	-0.444	-0.4565	Yes
133	ATP5H	1423676_at 1435112_a_at	18791	-0.454	-0.4545	Yes
134	CRSP7	1452282_at 1458377_at	19125	-0.527	-0.4649	Yes
135	DDX5	1419653_a_at 1423645_a_at 1433809_at 1433810_x_at 1438371_x_at 1454793_x_at	19138	-0.529	-0.4606	Yes
136	IRF1	1448436_a_at	19248	-0.560	-0.4605	Yes
137	EP300	1434765_at	19298	-0.572	-0.4575	Yes
138	KLC2	1418214_at 1431487_at	19312	-0.577	-0.4529	Yes
139	POFUT1	1443881_at 1450137_at 1456323_at	19318	-0.578	-0.4478	Yes
140	UBE2S	1416726_s_at 1430962_at	19319	-0.578	-0.4425	Yes
141	LDB1	1452024_a_at	19346	-0.583	-0.4384	Yes
142	BCL3	1418133_at	19407	-0.598	-0.4357	Yes
143	CPEB4	1420617_at 1420618_at 1449931_at	19505	-0.620	-0.4344	Yes
144	PSCD2	1450103_a_at	19753	-0.693	-0.4395	Yes
145	TLN1	1436042_at 1448402_at 1457782_at	19777	-0.700	-0.4341	Yes
146	PPP2R5E	1428461_at 1428462_at 1428463_a_at 1439401_x_at 1443533_at 1443949_at 1446356_at 1452788_at	19805	-0.710	-0.4289	Yes
147	BAHD1	1433703_s_at	19954	-0.763	-0.4287	Yes
148	TRIM39	1418851_at	20024	-0.790	-0.4246	Yes
149	PHF12	1434922_at 1453579_at	20058	-0.802	-0.4188	Yes
150	BANP	1452462_a_at	20151	-0.834	-0.4154	Yes
151	PBX3	1421193_a_at 1440154_at 1442270_at 1447640_s_at	20214	-0.853	-0.4104	Yes
152	CNNM1	1420354_at 1441312_at 1445979_at	20226	-0.858	-0.4031	Yes
153	RAP1GDS1	1425266_a_at 1459768_x_at	20258	-0.870	-0.3965	Yes
154	BRPF1	1460402_at	20343	-0.909	-0.3921	Yes
155	CAMTA2	1426901_s_at 1452229_at	20421	-0.941	-0.3870	Yes
156	RAB10	1422664_at 1429296_at 1442463_at 1453095_at	20471	-0.965	-0.3804	Yes
157	CNP	1418980_a_at 1437341_x_at 1449296_a_at	20547	-1.013	-0.3746	Yes
158	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	20772	-1.164	-0.3742	Yes
159	RAB3IP	1434306_at 1436103_at	20845	-1.215	-0.3664	Yes
160	FST	1421365_at 1434458_at	20955	-1.305	-0.3595	Yes
161	NOTCH3	1421964_at 1421965_s_at 1443300_at	20982	-1.332	-0.3485	Yes
162	GALNT10	1418194_at 1418195_at 1440493_at	21065	-1.436	-0.3391	Yes
163	RELB	1417856_at	21067	-1.442	-0.3260	Yes
164	FBXO11	1434108_at	21082	-1.455	-0.3133	Yes
165	SPRY2	1421656_at 1436584_at	21126	-1.498	-0.3016	Yes
166	RASGRP2	1417804_at 1438932_at 1438933_x_at 1442264_at 1449613_at	21172	-1.556	-0.2894	Yes
167	SMOX	1424268_at 1446509_at	21177	-1.561	-0.2753	Yes
168	MYST2	1433433_at 1440746_at 1447631_at	21223	-1.619	-0.2626	Yes
169	ALG5	1424160_at 1430854_at	21305	-1.727	-0.2505	Yes
170	SMARCD2	1426192_at 1448400_a_at 1448401_at	21380	-1.847	-0.2370	Yes
171	CAMK4	1421941_at 1426167_a_at 1439843_at 1442822_at 1452572_at	21432	-1.946	-0.2215	Yes
172	RAB22A	1424503_at 1424504_at 1451379_at 1454988_s_at	21550	-2.188	-0.2069	Yes
173	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	21680	-2.623	-0.1888	Yes
174	ARL6IP2	1416793_at 1416794_at 1431197_at 1435594_at	21729	-2.858	-0.1649	Yes
175	ATF7IP	1446323_at 1449192_at 1454973_at 1459096_at	21759	-2.998	-0.1388	Yes
176	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	21797	-3.181	-0.1114	Yes
177	NRF1	1420978_at 1424787_a_at 1434627_at 1439545_at 1445914_at	21819	-3.312	-0.0820	Yes
178	DNTTIP1	1417666_at 1456985_at	21867	-3.737	-0.0500	Yes
179	PABPC1	1418883_a_at 1419500_at 1453840_at	21920	-5.792	0.0006	Yes