Details for gene set V$AML1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AML1_Q6
Enrichment Score (ES)	-0.48049995
Normalized Enrichment Score (NES)	-1.593533
Nominal p-value	0.0
FDR q-value	0.06542023
FWER p-Value	0.559

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DIABLO	1417683_at 1425768_at	115	2.808	0.0191	No
2	SUPT16H	1419741_at 1449578_at 1456449_at	263	2.147	0.0311	No
3	TPM1	1423049_a_at 1423721_at 1447713_at 1456623_at	287	2.058	0.0479	No
4	EIF2B3	1434524_at	295	2.021	0.0652	No
5	MYOD1	1418420_at 1447675_x_at	346	1.893	0.0793	No
6	JDP2	1424972_at 1450350_a_at	426	1.725	0.0907	No
7	EIF3S1	1426394_at 1426395_s_at 1452052_s_at	637	1.424	0.0934	No
8	FCER1G	1418340_at	748	1.308	0.0998	No
9	BCAR3	1415936_at 1431564_at	838	1.232	0.1064	No
10	HDGF	1415888_at 1419964_s_at 1449681_at	1025	1.103	0.1074	No
11	MTX1	1418521_a_at 1418522_at 1447361_at	1063	1.078	0.1151	No
12	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	1098	1.059	0.1228	No
13	INPPL1	1460394_a_at	1173	1.015	0.1282	No
14	ACSL5	1428082_at	1772	0.743	0.1072	No
15	PTK9	1420873_at 1420874_at 1420875_at	1889	0.704	0.1080	No
16	VRK1	1425006_a_at 1458951_at	1942	0.686	0.1115	No
17	NGB	1417996_at 1417997_at	2092	0.643	0.1103	No
18	SLC15A3	1420697_at	2114	0.637	0.1148	No
19	PRICKLE1	1441663_at 1442172_at 1442400_at 1444759_at 1452249_at 1457637_at	2385	0.572	0.1074	No
20	PDE3B	1433694_at	2495	0.545	0.1071	No
21	RCOR2	1417302_at	2539	0.537	0.1098	No
22	PDZK1	1431701_a_at	2587	0.528	0.1123	No
23	AKAP3	1421531_at 1456591_x_at	2665	0.512	0.1132	No
24	VIM	1438118_x_at 1450641_at 1456292_a_at	2674	0.510	0.1173	No
25	MAMDC1	1442206_at 1442561_at 1445372_at 1458147_at	2810	0.480	0.1152	No
26	WNT8B	1421439_at	2877	0.468	0.1163	No
27	LUZP1	1416469_at 1448352_at	3177	0.425	0.1062	No
28	THBS3	1416623_at	3280	0.413	0.1051	No
29	ADAMTS4	1452595_at	4555	0.297	0.0491	No
30	FOXD2	1450289_at	4731	0.285	0.0436	No
31	ARHGAP21	1428368_at 1428369_s_at 1445628_at 1447206_at	4765	0.283	0.0445	No
32	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	4907	0.276	0.0404	No
33	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	5038	0.267	0.0368	No
34	COL9A2	1450673_at	5155	0.261	0.0337	No
35	RAB39	1437762_at	5273	0.255	0.0305	No
36	RIN1	1424507_at 1437460_x_at	5331	0.253	0.0301	No
37	BTG4	1426520_at	5700	0.233	0.0152	No
38	NUCB2	1418355_at	5909	0.224	0.0076	No
39	BLOC1S2	1429048_at	6198	0.212	-0.0038	No
40	KCNJ1	1418613_at 1418614_at	6339	0.207	-0.0084	No
41	SCN3B	1426328_a_at 1435767_at	6435	0.203	-0.0110	No
42	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6484	0.201	-0.0115	No
43	HOXC6	1427361_at 1427362_x_at 1427454_at	6502	0.200	-0.0105	No
44	BMF	1422995_at 1454880_s_at 1458325_x_at	6527	0.199	-0.0099	No
45	LY9	1449156_at	6629	0.196	-0.0128	No
46	SCEL	1422837_at 1459426_at	6655	0.195	-0.0123	No
47	SLITRK5	1429718_at	6726	0.192	-0.0138	No
48	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	6865	0.187	-0.0185	No
49	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	6898	0.186	-0.0184	No
50	COL4A2	1424051_at	6939	0.185	-0.0186	No
51	TBX5	1425694_at 1425695_at	6986	0.183	-0.0191	No
52	IFNG	1425947_at	7464	0.167	-0.0396	No
53	GRK5	1446361_at 1446998_at 1449514_at	7589	0.163	-0.0439	No
54	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	7718	0.158	-0.0484	No
55	STRC	1421695_at	7788	0.156	-0.0502	No
56	POU2F1	1419716_a_at 1427695_a_at 1427835_at	7929	0.151	-0.0554	No
57	NAV3	1459440_at	8058	0.146	-0.0600	No
58	GTF2A1	1421357_at	8084	0.146	-0.0599	No
59	HOXC4	1422870_at	8342	0.138	-0.0705	No
60	SCN8A	1423515_at 1439889_at 1442208_at 1451894_a_at 1457412_at 1458693_at	8374	0.137	-0.0707	No
61	SLC6A9	1417636_at 1431812_a_at	8463	0.135	-0.0736	No
62	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8486	0.134	-0.0734	No
63	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	8695	0.127	-0.0819	No
64	CYP17A1	1417017_at	8758	0.125	-0.0836	No
65	PDZRN4	1456512_at	8792	0.124	-0.0841	No
66	RAB30	1426452_a_at	8919	0.120	-0.0888	No
67	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	8925	0.120	-0.0880	No
68	ANXA8	1417732_at 1425789_s_at	8928	0.120	-0.0871	No
69	KCTD4	1420537_at 1441801_at	8999	0.117	-0.0893	No
70	CRTAC1	1426606_at 1452936_at 1457474_at 1459858_x_at	9133	0.113	-0.0944	No
71	PGF	1418471_at	9567	0.100	-0.1134	No
72	RGS1	1417601_at	9606	0.099	-0.1143	No
73	GPD1	1416204_at 1439396_x_at 1448249_at 1456732_at	9968	0.089	-0.1301	No
74	TLL2	1421526_at	10138	0.084	-0.1372	No
75	UBL3	1423461_a_at	10567	0.072	-0.1562	No
76	ADAMTS8	1418270_at 1444174_at	10585	0.071	-0.1564	No
77	ANKRD1	1420991_at 1420992_at	10588	0.071	-0.1559	No
78	RICS	1438451_at 1447099_at	10914	0.062	-0.1703	No
79	DAB1	1421100_a_at 1427307_a_at 1427308_at 1435577_at 1435578_s_at	11229	0.053	-0.1842	No
80	ZBTB8	1455193_at	11522	0.045	-0.1973	No
81	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	11686	0.040	-0.2044	No
82	FGF4	1420085_at 1420086_x_at 1449729_at 1450282_at	11740	0.038	-0.2065	No
83	COL4A1	1426348_at 1452035_at	12185	0.025	-0.2267	No
84	TNFSF4	1421744_at	12276	0.022	-0.2307	No
85	HLX1	1418939_at	12295	0.021	-0.2313	No
86	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	12451	0.017	-0.2383	No
87	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	12487	0.016	-0.2398	No
88	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	12680	0.010	-0.2485	No
89	LMO3	1455754_at	12797	0.007	-0.2538	No
90	RASAL2	1436910_at 1444671_at	13311	-0.011	-0.2773	No
91	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	13354	-0.013	-0.2791	No
92	NDUFA9	1416663_at	13394	-0.014	-0.2808	No
93	SCNN1A	1425088_at	13607	-0.021	-0.2903	No
94	CLDN10	1426147_s_at	13614	-0.021	-0.2904	No
95	CTSK	1450652_at	13735	-0.026	-0.2957	No
96	RGS18	1420398_at 1449856_at	13833	-0.030	-0.2999	No
97	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	13845	-0.030	-0.3001	No
98	DNM3	1425403_at 1436624_at 1436875_at 1438801_at 1445540_at 1446265_at 1446431_at 1446694_at 1457405_at	13865	-0.031	-0.3007	No
99	MMP13	1417256_at	13898	-0.032	-0.3019	No
100	MATN1	1418477_at	13952	-0.034	-0.3041	No
101	ARNT	1419996_s_at 1421721_a_at 1425064_at 1437042_at 1449696_at	14017	-0.036	-0.3067	No
102	NRAS	1422688_a_at 1454060_a_at	14084	-0.039	-0.3094	No
103	MKRN3	1418160_at	14254	-0.046	-0.3168	No
104	ATP6V0B	1416769_s_at 1425448_x_at 1437013_x_at	14303	-0.047	-0.3186	No
105	TACSTD2	1423323_at	14563	-0.057	-0.3300	No
106	TITF1	1422346_at	14705	-0.063	-0.3359	No
107	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	14806	-0.068	-0.3399	No
108	IL23A	1419529_at	14807	-0.068	-0.3393	No
109	LMO2	1454086_a_at	14833	-0.068	-0.3399	No
110	HIPK1	1421298_a_at 1424540_at 1457515_at	14871	-0.070	-0.3410	No
111	ITGA10	1440235_at	14942	-0.073	-0.3436	No
112	NFRKB	1434753_at 1445551_at	15111	-0.082	-0.3506	No
113	TNNT2	1418726_a_at 1424967_x_at 1440424_at	15127	-0.082	-0.3505	No
114	GZMB	1419060_at	15183	-0.085	-0.3523	No
115	RDH5	1418808_at 1421702_at	15349	-0.093	-0.3591	No
116	DKK1	1420360_at 1458232_at	15510	-0.101	-0.3656	No
117	ENTPD1	1423326_at 1450939_at 1453586_at	15536	-0.102	-0.3659	No
118	ARHGAP12	1431052_at 1444463_at 1451525_at 1451526_at	15784	-0.115	-0.3762	No
119	MMP14	1416572_at 1448383_at	16006	-0.128	-0.3853	No
120	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	16031	-0.131	-0.3852	No
121	ABCD4	1419572_a_at 1427829_at	16213	-0.142	-0.3923	No
122	IBRDC3	1432478_a_at 1435226_at	16332	-0.151	-0.3964	No
123	MPL	1421461_at 1451919_a_at	16880	-0.194	-0.4199	No
124	MOAP1	1431823_at 1448787_at	17006	-0.208	-0.4238	No
125	SIRT1	1418640_at 1458538_at	17144	-0.222	-0.4282	No
126	MR1	1421898_a_at 1421899_a_at	17324	-0.242	-0.4343	No
127	SFRS4	1448778_at	17648	-0.278	-0.4467	No
128	BLOC1S1	1422614_s_at	17771	-0.293	-0.4498	No
129	PXN	1424027_at 1426085_a_at 1456135_s_at	17857	-0.303	-0.4511	No
130	RHOG	1422572_at	18098	-0.338	-0.4592	No
131	PTPN22	1417995_at 1442820_at	18137	-0.342	-0.4579	No
132	PDE6H	1450765_a_at 1450766_at	18148	-0.344	-0.4554	No
133	SNX1	1416260_a_at	18253	-0.360	-0.4570	No
134	RASGEF1A	1429316_at 1435218_at	18299	-0.366	-0.4559	No
135	TBK1	1422469_at 1445571_at 1460315_s_at	18339	-0.371	-0.4545	No
136	ACIN1	1416568_a_at 1421197_a_at	18474	-0.390	-0.4572	No
137	DDX23	1430050_at	18636	-0.420	-0.4610	No
138	BATF	1419410_at	18696	-0.432	-0.4599	No
139	SLC37A4	1417042_at	18835	-0.461	-0.4623	No
140	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	18859	-0.465	-0.4593	No
141	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	18973	-0.494	-0.4602	No
142	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	19017	-0.502	-0.4578	No
143	AP1G2	1419113_at	19144	-0.530	-0.4590	No
144	MAP3K11	1450669_at	19613	-0.647	-0.4749	Yes
145	EDARADD	1421213_at 1433132_at 1433133_at 1437800_at	19733	-0.687	-0.4744	Yes
146	GPATC2	1420528_at 1440329_s_at 1445189_at 1452498_at 1458566_at	19838	-0.721	-0.4729	Yes
147	MIZF	1440255_at	19874	-0.735	-0.4681	Yes
148	ITGB7	1418741_at	19927	-0.754	-0.4639	Yes
149	DACT1	1417937_at	20003	-0.780	-0.4606	Yes
150	XCL1	1419412_at	20123	-0.825	-0.4589	Yes
151	EIF2C1	1434331_at	20147	-0.833	-0.4527	Yes
152	AGTRL1	1423037_at 1438651_a_at	20300	-0.890	-0.4519	Yes
153	RAB5B	1422119_at 1437446_at	20337	-0.907	-0.4457	Yes
154	NOTCH2	1451889_at 1455556_at	20365	-0.915	-0.4390	Yes
155	MRPS31	1417737_at 1443165_at	20437	-0.951	-0.4340	Yes
156	CAP1	1417461_at 1417462_at	20478	-0.971	-0.4274	Yes
157	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	20510	-0.989	-0.4202	Yes
158	MADD	1425735_at 1455502_at	20705	-1.117	-0.4194	Yes
159	STAT2	1421911_at 1450403_at	20915	-1.278	-0.4179	Yes
160	TACC2	1425745_a_at 1447891_at	20987	-1.338	-0.4095	Yes
161	FLI1	1422024_at 1433512_at 1441584_at	21006	-1.360	-0.3985	Yes
162	CBL	1434829_at 1446608_at 1450457_at 1455886_at	21039	-1.405	-0.3877	Yes
163	CD6	1451910_a_at	21098	-1.469	-0.3776	Yes
164	PACS1	1420112_at 1435762_at 1440014_at 1449737_at 1459707_at	21181	-1.563	-0.3678	Yes
165	CRY1	1433733_a_at	21191	-1.574	-0.3545	Yes
166	CD69	1428735_at	21200	-1.588	-0.3411	Yes
167	SLC37A2	1452492_a_at	21319	-1.753	-0.3313	Yes
168	S100A9	1448756_at	21360	-1.804	-0.3174	Yes
169	DGKA	1418578_at	21363	-1.811	-0.3017	Yes
170	NR4A1	1416505_at	21368	-1.829	-0.2860	Yes
171	GRASP	1441894_s_at 1442616_at 1460206_at	21375	-1.838	-0.2703	Yes
172	KIF1B	1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at	21408	-1.901	-0.2552	Yes
173	EMP1	1416529_at 1459171_at	21426	-1.933	-0.2392	Yes
174	RORC	1425792_a_at 1425793_a_at	21508	-2.107	-0.2246	Yes
175	ID3	1416630_at	21558	-2.218	-0.2075	Yes
176	DNAJC14	1426553_at 1437546_at 1437547_s_at	21624	-2.416	-0.1895	Yes
177	SCN2B	1430648_at 1436134_at 1457144_at	21632	-2.432	-0.1687	Yes
178	SEMA4A	1438934_x_at 1448110_at	21677	-2.617	-0.1479	Yes
179	SLC12A6	1436989_s_at 1449878_a_at 1458916_at	21721	-2.826	-0.1253	Yes
180	ATF7IP	1446323_at 1449192_at 1454973_at 1459096_at	21759	-2.998	-0.1009	Yes
181	RAG1	1440574_at 1450680_at	21853	-3.599	-0.0739	Yes
182	EGR2	1427682_a_at 1427683_at	21887	-4.118	-0.0396	Yes
183	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	21905	-4.795	0.0013	Yes