Details for gene set CGTSACG_V$PAX3

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	CGTSACG_V$PAX3_B
Enrichment Score (ES)	-0.5253042
Normalized Enrichment Score (NES)	-1.6188691
Nominal p-value	0.0015822785
FDR q-value	0.062158916
FWER p-Value	0.436

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SUPT16H	1419741_at 1449578_at 1456449_at	263	2.147	0.0201	No
2	NRK	1436399_s_at 1450078_at 1450079_at	341	1.896	0.0451	No
3	SLC38A2	1426722_at 1429593_at 1429594_at	802	1.264	0.0430	No
4	SMARCE1	1422675_at 1422676_at 1430822_at	847	1.229	0.0594	No
5	IKBKB	1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at	991	1.128	0.0697	No
6	PCNP	1428314_at 1452735_at	1325	0.932	0.0685	No
7	SLC25A3	1416300_a_at 1440302_at	1385	0.901	0.0793	No
8	ELOVL5	1415840_at 1437211_x_at 1459242_at	1413	0.882	0.0912	No
9	CANX	1415692_s_at 1422845_at 1428935_at	1491	0.854	0.1005	No
10	EHD4	1449852_a_at	1836	0.721	0.0956	No
11	CDKN1A	1421679_a_at 1424638_at	1903	0.701	0.1031	No
12	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	2184	0.618	0.0995	No
13	PLK2	1427005_at	2523	0.539	0.0921	No
14	MRRF	1426364_at	2625	0.519	0.0953	No
15	ZZEF1	1434192_at 1438691_at 1446081_at 1453583_at	3039	0.443	0.0830	No
16	RAB7	1415734_at 1448159_at	3067	0.438	0.0883	No
17	HMGN1	1422495_a_at 1422496_at 1438940_x_at 1455897_x_at	3233	0.419	0.0871	No
18	CUL5	1428287_at 1452722_a_at 1456102_a_at	3472	0.390	0.0820	No
19	SULT4A1	1421606_a_at 1433714_at	3738	0.360	0.0753	No
20	PTMA	1423455_at	3751	0.359	0.0801	No
21	CHGB	1415885_at	3847	0.350	0.0810	No
22	STXBP1	1420505_a_at 1420506_a_at	4505	0.300	0.0554	No
23	NEUROD2	1444362_at	4800	0.281	0.0462	No
24	RBBP8	1427061_at 1427062_at 1446097_at	5177	0.260	0.0329	No
25	GTF2H1	1453169_a_at	6125	0.216	-0.0073	No
26	PPM2C	1434228_at 1438201_at	6480	0.201	-0.0205	No
27	FOXD3	1422210_at	6732	0.192	-0.0291	No
28	EGR4	1449977_at	6920	0.185	-0.0349	No
29	PEPD	1416712_at	7266	0.173	-0.0481	No
30	EIF4E	1450909_at 1457489_at 1459371_at	7293	0.172	-0.0467	No
31	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	7635	0.161	-0.0599	No
32	RASD1	1423619_at	7730	0.158	-0.0618	No
33	PHACTR3	1429651_at	7982	0.149	-0.0711	No
34	CX36	1423019_at 1435297_at	8280	0.140	-0.0826	No
35	DHX36	1424397_at 1424398_at 1437550_at	8344	0.138	-0.0834	No
36	NOL4	1430189_at 1441447_at 1456387_at	8449	0.135	-0.0862	No
37	SLC6A12	1449382_at	8528	0.132	-0.0878	No
38	TRIB1	1424880_at 1424881_at	8703	0.127	-0.0938	No
39	MAB21L1	1421369_a_at 1424679_at 1440860_at 1457290_at	8936	0.119	-0.1027	No
40	TAF11	1446161_at 1451995_at	8982	0.118	-0.1030	No
41	RNF146	1417733_at 1425001_at 1425713_a_at	9194	0.112	-0.1109	No
42	RBM18	1420607_at 1420608_at 1458182_at	9447	0.104	-0.1209	No
43	IRX6	1427383_at	9631	0.099	-0.1278	No
44	TEX14	1419240_at	9747	0.095	-0.1317	No
45	YME1L1	1423360_at 1423361_at 1437822_at 1450954_at	9761	0.095	-0.1308	No
46	KCNE4	1418156_at	9994	0.088	-0.1401	No
47	TSPYL5	1455807_at	10086	0.085	-0.1430	No
48	CDC14B	1429418_at 1437070_at	10244	0.081	-0.1490	No
49	NDUFB2	1416834_x_at 1442658_at 1448483_a_at 1453806_at	10405	0.076	-0.1552	No
50	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	10928	0.061	-0.1782	No
51	BHLHB2	1418025_at	11657	0.041	-0.2109	No
52	PITX2	1424797_a_at 1450482_a_at	12020	0.029	-0.2271	No
53	GNAS	1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at	12117	0.027	-0.2311	No
54	MASTL	1423524_at 1423525_at 1444725_at 1447136_at	12174	0.025	-0.2333	No
55	IPO7	1442511_at 1454955_at 1458165_at	12189	0.024	-0.2335	No
56	SLC18A2	1437079_at	12837	0.005	-0.2631	No
57	EN2	1418868_at	13039	-0.002	-0.2723	No
58	CASK	1422518_at 1422519_at 1427692_a_at 1445152_at	13139	-0.005	-0.2767	No
59	TNRC15	1439837_at 1446275_at 1451856_at 1457472_at	13383	-0.014	-0.2876	No
60	PPP1R3D	1452922_at	13980	-0.035	-0.3144	No
61	ZZZ3	1434332_at 1438487_s_at 1441748_at	14629	-0.060	-0.3432	No
62	HOXC10	1439798_at	14855	-0.069	-0.3525	No
63	NKX2-3	1425827_at 1427741_x_at 1452528_a_at	15133	-0.082	-0.3639	No
64	AP2B1	1427077_a_at 1445142_at 1446566_at 1452292_at 1458971_at	15241	-0.088	-0.3675	No
65	BRAF	1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at	15601	-0.105	-0.3824	No
66	EGR3	1421486_at 1436329_at	15625	-0.106	-0.3818	No
67	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	16020	-0.130	-0.3979	No
68	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	16376	-0.154	-0.4119	No
69	GEM	1426063_a_at	16465	-0.160	-0.4135	No
70	SMARCA5	1440048_at	16594	-0.170	-0.4168	No
71	RAD51C	1423026_at 1438453_at	16675	-0.178	-0.4178	No
72	PPP2R1A	1415819_a_at 1438174_x_at 1438383_x_at 1438991_x_at 1455929_x_at	16787	-0.186	-0.4201	No
73	GGA1	1423834_s_at 1459863_x_at	16878	-0.194	-0.4213	No
74	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	17203	-0.227	-0.4328	No
75	ADAM10	1450104_at 1460083_at	17357	-0.244	-0.4361	No
76	PPT2	1418302_at	17543	-0.266	-0.4406	No
77	PTPN23	1427128_at	17747	-0.290	-0.4455	No
78	HMOX2	1416399_a_at	17769	-0.293	-0.4421	No
79	WSB1	1425241_a_at	17971	-0.321	-0.4465	No
80	PAK2	1434250_at 1454887_at	18043	-0.329	-0.4448	No
81	CBX6	1424407_s_at 1429290_at	18307	-0.367	-0.4514	No
82	HPS5	1434677_at	18312	-0.368	-0.4460	No
83	EPC1	1418850_at 1429914_at 1440198_at 1440742_at 1442279_at 1443675_at 1458315_at	18390	-0.377	-0.4439	No
84	CTCF	1418330_at 1449042_at	18744	-0.444	-0.4534	No
85	HTATIP	1433980_at 1433981_s_at	19145	-0.531	-0.4638	No
86	WDR23	1448418_s_at 1460189_at	19527	-0.626	-0.4718	No
87	RAD9A	1418404_at	19655	-0.662	-0.4677	No
88	PIAS4	1418861_at 1455394_at	20913	-1.277	-0.5062	Yes
89	USP8	1422883_at 1443420_at 1446807_at 1447386_at	21044	-1.408	-0.4910	Yes
90	RELB	1417856_at	21067	-1.442	-0.4704	Yes
91	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	21135	-1.506	-0.4509	Yes
92	CRY1	1433733_a_at	21191	-1.574	-0.4298	Yes
93	HOXA9	1421579_at 1455626_at	21257	-1.668	-0.4077	Yes
94	NR4A1	1416505_at	21368	-1.829	-0.3853	Yes
95	POLB	1425371_at 1434229_a_at	21467	-2.021	-0.3595	Yes
96	BCL11B	1440137_at 1441762_at 1450339_a_at	21512	-2.120	-0.3297	Yes
97	EDEM1	1424065_at 1451218_at	21560	-2.220	-0.2986	Yes
98	NAB2	1417930_at	21625	-2.418	-0.2653	Yes
99	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	21644	-2.460	-0.2292	Yes
100	EGR1	1417065_at	21809	-3.263	-0.1878	Yes
101	EGR2	1427682_a_at 1427683_at	21887	-4.118	-0.1295	Yes
102	PNRC1	1433668_at 1438524_x_at 1439513_at	21934	-8.778	-0.0000	Yes