Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | CCAWWNAAGG_V$SRF_Q4 |
| Enrichment Score (ES) | -0.62834114 |
| Normalized Enrichment Score (NES) | -1.8172143 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.041142184 |
| FWER p-Value | 0.031 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CKM | 1417614_at | 306 | 1.974 | 0.0321 | No | ||
| 2 | TCF4 | 1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at | 2552 | 0.535 | -0.0581 | No | ||
| 3 | KCTD15 | 1435339_at | 2606 | 0.523 | -0.0483 | No | ||
| 4 | FOSB | 1422134_at | 3800 | 0.354 | -0.0946 | No | ||
| 5 | SDPR | 1416778_at 1416779_at 1443832_s_at | 4023 | 0.334 | -0.0970 | No | ||
| 6 | EPHB1 | 1455188_at | 4510 | 0.300 | -0.1122 | No | ||
| 7 | DEFB129 | 1440957_at | 4792 | 0.281 | -0.1185 | No | ||
| 8 | MAPKAPK2 | 1426648_at | 5246 | 0.257 | -0.1332 | No | ||
| 9 | ANP32E | 1420592_a_at 1447680_at | 5392 | 0.249 | -0.1341 | No | ||
| 10 | SCN3B | 1426328_a_at 1435767_at | 6435 | 0.203 | -0.1770 | No | ||
| 11 | CALD1 | 1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at | 6451 | 0.202 | -0.1730 | No | ||
| 12 | PLCB3 | 1448661_at | 6579 | 0.197 | -0.1742 | No | ||
| 13 | RARB | 1454906_at | 6847 | 0.188 | -0.1820 | No | ||
| 14 | VIT | 1426231_at | 6917 | 0.185 | -0.1808 | No | ||
| 15 | H3F3A | 1423263_at 1442087_at | 7274 | 0.173 | -0.1931 | No | ||
| 16 | MRVI1 | 1422245_a_at 1459665_s_at | 7404 | 0.168 | -0.1950 | No | ||
| 17 | SCOC | 1416267_at 1430999_a_at | 7516 | 0.165 | -0.1963 | No | ||
| 18 | SFRS12 | 1427134_at 1427135_at 1427136_s_at 1458056_at | 7642 | 0.161 | -0.1982 | No | ||
| 19 | HOXD13 | 1422239_at 1440626_at | 7865 | 0.153 | -0.2048 | No | ||
| 20 | MYL7 | 1449071_at | 8440 | 0.135 | -0.2279 | No | ||
| 21 | RAB30 | 1426452_a_at | 8919 | 0.120 | -0.2470 | No | ||
| 22 | NPAS2 | 1421036_at 1421037_at | 8952 | 0.119 | -0.2457 | No | ||
| 23 | NKX2-2 | 1421112_at | 8992 | 0.117 | -0.2447 | No | ||
| 24 | SRF | 1418255_s_at 1418256_at | 9000 | 0.117 | -0.2423 | No | ||
| 25 | NKX6-1 | 1425828_at | 9203 | 0.111 | -0.2489 | No | ||
| 26 | TRDN | 1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at | 9503 | 0.102 | -0.2602 | No | ||
| 27 | INSM1 | 1421399_at 1455865_at | 9589 | 0.100 | -0.2618 | No | ||
| 28 | TAGLN | 1423505_at | 11175 | 0.055 | -0.3330 | No | ||
| 29 | PLN | 1423359_at 1450952_at 1460332_at | 11242 | 0.053 | -0.3348 | No | ||
| 30 | TNNC1 | 1418370_at | 11456 | 0.047 | -0.3434 | No | ||
| 31 | NPPA | 1456062_at | 11646 | 0.041 | -0.3511 | No | ||
| 32 | SP7 | 1418425_at | 11727 | 0.039 | -0.3539 | No | ||
| 33 | MYH11 | 1418122_at 1448962_at | 12590 | 0.012 | -0.3930 | No | ||
| 34 | PODN | 1435180_at | 12669 | 0.011 | -0.3963 | No | ||
| 35 | PRDM1 | 1420425_at 1444997_at | 12691 | 0.010 | -0.3971 | No | ||
| 36 | ATRX | 1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at | 12732 | 0.008 | -0.3987 | No | ||
| 37 | CORO1C | 1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at | 13354 | -0.013 | -0.4268 | No | ||
| 38 | TPM2 | 1419738_a_at 1419739_at 1425028_a_at 1449577_x_at | 13437 | -0.016 | -0.4302 | No | ||
| 39 | UBE2C | 1452954_at | 13543 | -0.019 | -0.4346 | No | ||
| 40 | DIXDC1 | 1425256_a_at 1435207_at 1443957_at 1444395_at | 13747 | -0.027 | -0.4432 | No | ||
| 41 | MRGPRF | 1425894_at | 14007 | -0.036 | -0.4542 | No | ||
| 42 | TITF1 | 1422346_at | 14705 | -0.063 | -0.4846 | No | ||
| 43 | HOXD10 | 1418606_at | 14887 | -0.070 | -0.4913 | No | ||
| 44 | PPP1R12A | 1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at | 14927 | -0.072 | -0.4914 | No | ||
| 45 | ERBB2IP | 1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at | 15219 | -0.087 | -0.5027 | No | ||
| 46 | HOXC5 | 1439885_at 1450832_at 1456301_at | 15852 | -0.119 | -0.5288 | No | ||
| 47 | FGFRL1 | 1447878_s_at 1451912_a_at | 16259 | -0.145 | -0.5440 | No | ||
| 48 | DAPK3 | 1423446_at 1456496_at | 16948 | -0.201 | -0.5708 | No | ||
| 49 | MYLK | 1425504_at 1425505_at 1425506_at | 17558 | -0.268 | -0.5924 | No | ||
| 50 | KCNK3 | 1425341_at 1425342_a_at 1426058_a_at | 17810 | -0.297 | -0.5969 | No | ||
| 51 | CFL2 | 1418066_at 1418067_at 1431432_at | 18279 | -0.364 | -0.6098 | No | ||
| 52 | SVIL | 1427662_at 1460694_s_at 1460735_at | 18321 | -0.370 | -0.6031 | No | ||
| 53 | PFN1 | 1449018_at | 18536 | -0.403 | -0.6035 | No | ||
| 54 | PICALM | 1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at | 18973 | -0.494 | -0.6119 | No | ||
| 55 | ACTG2 | 1422340_a_at | 19334 | -0.581 | -0.6148 | Yes | ||
| 56 | ACTA1 | 1427735_a_at | 19508 | -0.620 | -0.6082 | Yes | ||
| 57 | CSRP1 | 1425810_a_at 1425811_a_at | 19531 | -0.628 | -0.5946 | Yes | ||
| 58 | PHF12 | 1434922_at 1453579_at | 20058 | -0.802 | -0.5999 | Yes | ||
| 59 | RUNDC1 | 1454829_at | 20199 | -0.848 | -0.5865 | Yes | ||
| 60 | FLNA | 1426677_at | 20659 | -1.088 | -0.5821 | Yes | ||
| 61 | DUSP2 | 1450698_at | 20949 | -1.298 | -0.5651 | Yes | ||
| 62 | DUSP5 | 1437199_at | 21089 | -1.461 | -0.5373 | Yes | ||
| 63 | NR4A1 | 1416505_at | 21368 | -1.829 | -0.5074 | Yes | ||
| 64 | RASSF2 | 1428392_at 1444889_at | 21668 | -2.567 | -0.4611 | Yes | ||
| 65 | LSP1 | 1417756_a_at | 21764 | -3.014 | -0.3952 | Yes | ||
| 66 | PCDH7 | 1427592_at 1437442_at 1449249_at 1456214_at | 21783 | -3.107 | -0.3235 | Yes | ||
| 67 | ACTB | 1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at | 21797 | -3.181 | -0.2498 | Yes | ||
| 68 | EGR1 | 1417065_at | 21809 | -3.263 | -0.1742 | Yes | ||
| 69 | MBNL1 | 1416904_at 1439686_at 1440315_at 1445106_at 1457924_at | 21851 | -3.587 | -0.0924 | Yes | ||
| 70 | EGR2 | 1427682_a_at 1427683_at | 21887 | -4.118 | 0.0021 | Yes |
