Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | HIVNEFPATHWAY |
| Enrichment Score (ES) | -0.62360084 |
| Normalized Enrichment Score (NES) | -1.742689 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.12218679 |
| FWER p-Value | 0.772 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CYCS | 1422484_at 1445484_at | 133 | 2.683 | 0.0593 | No | ||
| 2 | CHUK | 1417091_at 1428210_s_at 1451383_a_at | 1414 | 0.882 | 0.0223 | No | ||
| 3 | PSEN2 | 1425869_a_at 1431542_at | 1813 | 0.728 | 0.0219 | No | ||
| 4 | GSN | 1415812_at 1436991_x_at 1437171_x_at 1441225_at 1456312_x_at 1456568_at 1456569_x_at | 1975 | 0.677 | 0.0310 | No | ||
| 5 | LMNB2 | 1451849_a_at | 2217 | 0.607 | 0.0348 | No | ||
| 6 | RASA1 | 1426476_at 1426477_at 1426478_at 1438998_at | 2641 | 0.515 | 0.0280 | No | ||
| 7 | LMNB1 | 1423520_at 1423521_at | 4379 | 0.308 | -0.0438 | No | ||
| 8 | CASP8 | 1424552_at | 4574 | 0.296 | -0.0455 | No | ||
| 9 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 7278 | 0.173 | -0.1648 | No | ||
| 10 | TNF | 1419607_at | 9891 | 0.091 | -0.2819 | No | ||
| 11 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 10713 | 0.067 | -0.3178 | No | ||
| 12 | CDC2L1 | 1418841_s_at | 10992 | 0.060 | -0.3290 | No | ||
| 13 | NFKB1 | 1427705_a_at 1442949_at | 11951 | 0.032 | -0.3720 | No | ||
| 14 | LMNA | 1421654_a_at 1425472_a_at 1426868_x_at 1452212_at 1457670_s_at | 12439 | 0.017 | -0.3939 | No | ||
| 15 | NUMA1 | 1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at | 13771 | -0.028 | -0.4540 | No | ||
| 16 | CRADD | 1427505_a_at 1443430_at | 14362 | -0.049 | -0.4798 | No | ||
| 17 | PRKDC | 1451576_at | 15265 | -0.089 | -0.5188 | No | ||
| 18 | BCL2 | 1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at | 15400 | -0.096 | -0.5226 | No | ||
| 19 | BID | 1417045_at 1447873_x_at 1448560_at | 15945 | -0.125 | -0.5444 | No | ||
| 20 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 16138 | -0.137 | -0.5499 | No | ||
| 21 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 16324 | -0.150 | -0.5547 | No | ||
| 22 | PRKCD | 1422847_a_at 1442256_at | 16427 | -0.157 | -0.5555 | No | ||
| 23 | RIPK1 | 1419508_at 1439273_at 1449485_at | 16494 | -0.162 | -0.5546 | No | ||
| 24 | DAXX | 1419026_at | 17030 | -0.210 | -0.5739 | No | ||
| 25 | PAK2 | 1434250_at 1454887_at | 18043 | -0.329 | -0.6121 | No | ||
| 26 | CASP2 | 1448165_at | 18295 | -0.366 | -0.6147 | Yes | ||
| 27 | BAG4 | 1418707_at 1439024_at 1449186_at | 18335 | -0.371 | -0.6074 | Yes | ||
| 28 | TNFRSF1B | 1418099_at 1448951_at | 18403 | -0.379 | -0.6012 | Yes | ||
| 29 | PTK2 | 1423059_at 1430827_a_at 1439198_at 1440082_at 1441475_at 1443384_at 1445137_at | 18479 | -0.392 | -0.5951 | Yes | ||
| 30 | RB1 | 1417850_at 1441494_at 1444400_at 1444454_at 1457447_at | 18682 | -0.430 | -0.5939 | Yes | ||
| 31 | PSEN1 | 1420261_at 1421853_at 1425549_at 1450399_at | 18826 | -0.459 | -0.5892 | Yes | ||
| 32 | CASP9 | 1426125_a_at 1437537_at 1457816_at | 18999 | -0.498 | -0.5849 | Yes | ||
| 33 | DFFB | 1421229_at 1437051_at | 19256 | -0.562 | -0.5829 | Yes | ||
| 34 | APAF1 | 1450223_at | 19368 | -0.588 | -0.5737 | Yes | ||
| 35 | BIRC4 | 1421394_a_at 1426636_a_at 1437533_at 1440351_at 1450231_a_at 1450232_at 1456088_at | 19555 | -0.634 | -0.5667 | Yes | ||
| 36 | ACTG1 | 1415779_s_at | 19566 | -0.636 | -0.5516 | Yes | ||
| 37 | MDM2 | 1423605_a_at 1427718_a_at 1457929_at | 19665 | -0.666 | -0.5399 | Yes | ||
| 38 | RELA | 1419536_a_at | 19723 | -0.683 | -0.5258 | Yes | ||
| 39 | TRAF2 | 1451233_at | 19866 | -0.732 | -0.5145 | Yes | ||
| 40 | FADD | 1416888_at 1446499_at | 20011 | -0.786 | -0.5019 | Yes | ||
| 41 | BIRC2 | 1418854_at | 20095 | -0.816 | -0.4858 | Yes | ||
| 42 | MAP3K14 | 1422999_at 1434364_at | 20160 | -0.837 | -0.4683 | Yes | ||
| 43 | ARHGDIB | 1426454_at | 20392 | -0.931 | -0.4562 | Yes | ||
| 44 | BIRC3 | 1421392_a_at 1425223_at | 20998 | -1.351 | -0.4509 | Yes | ||
| 45 | MAP3K1 | 1424850_at | 21056 | -1.420 | -0.4189 | Yes | ||
| 46 | CFLAR | 1424996_at 1425686_at 1425687_at 1439600_at 1449317_at | 21351 | -1.795 | -0.3886 | Yes | ||
| 47 | TRAF1 | 1423602_at 1445452_at | 21401 | -1.883 | -0.3449 | Yes | ||
| 48 | TNFRSF1A | 1417291_at | 21427 | -1.934 | -0.2989 | Yes | ||
| 49 | CASP7 | 1426062_a_at 1448659_at | 21726 | -2.838 | -0.2433 | Yes | ||
| 50 | MAP2K7 | 1421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at | 21755 | -2.971 | -0.1722 | Yes | ||
| 51 | DFFA | 1450885_at 1457564_at | 21857 | -3.653 | -0.0877 | Yes | ||
| 52 | CASP6 | 1415995_at 1458715_at | 21868 | -3.739 | 0.0030 | Yes |
