Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | EMT_DN |
| Enrichment Score (ES) | -0.6568988 |
| Normalized Enrichment Score (NES) | -1.8213831 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.057905883 |
| FWER p-Value | 0.303 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | MYH9 | 1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at | 640 | 1.418 | 0.0013 | No | ||
| 2 | ID1 | 1425895_a_at | 674 | 1.389 | 0.0297 | No | ||
| 3 | CTNND1 | 1422450_at 1437448_s_at 1445830_at | 935 | 1.158 | 0.0428 | No | ||
| 4 | ITGB5 | 1417533_a_at 1417534_at 1456133_x_at 1456195_x_at | 984 | 1.131 | 0.0650 | No | ||
| 5 | SERPINB5 | 1421752_a_at 1424623_at 1438856_x_at 1441941_x_at | 1301 | 0.943 | 0.0708 | No | ||
| 6 | NRP1 | 1418084_at 1448943_at 1448944_at 1457198_at | 1613 | 0.804 | 0.0739 | No | ||
| 7 | PLK2 | 1427005_at | 2523 | 0.539 | 0.0440 | No | ||
| 8 | ATF3 | 1449363_at | 3225 | 0.420 | 0.0210 | No | ||
| 9 | FOSB | 1422134_at | 3800 | 0.354 | 0.0024 | No | ||
| 10 | ITPR1 | 1417279_at 1443492_at 1457189_at 1460203_at | 5578 | 0.239 | -0.0736 | No | ||
| 11 | INMT | 1418697_at | 5818 | 0.228 | -0.0796 | No | ||
| 12 | CTGF | 1416953_at | 5978 | 0.221 | -0.0821 | No | ||
| 13 | TACSTD1 | 1416579_a_at 1447899_x_at | 6081 | 0.218 | -0.0821 | No | ||
| 14 | CTSH | 1418365_at 1443814_x_at | 7633 | 0.161 | -0.1495 | No | ||
| 15 | TGFB3 | 1417455_at | 8977 | 0.118 | -0.2083 | No | ||
| 16 | TIMP3 | 1419088_at 1419089_at 1449334_at 1449335_at | 9910 | 0.091 | -0.2489 | No | ||
| 17 | VAMP8 | 1420624_a_at | 10599 | 0.071 | -0.2788 | No | ||
| 18 | CDH1 | 1443509_at 1448261_at | 11382 | 0.049 | -0.3135 | No | ||
| 19 | GRB7 | 1448227_at | 12515 | 0.015 | -0.3649 | No | ||
| 20 | FBP2 | 1449088_at | 12537 | 0.014 | -0.3655 | No | ||
| 21 | NUMB | 1416891_at 1425368_a_at 1444337_at 1457175_at | 13287 | -0.010 | -0.3996 | No | ||
| 22 | F3 | 1417408_at | 14164 | -0.042 | -0.4387 | No | ||
| 23 | SAT1 | 1420502_at | 14839 | -0.069 | -0.4680 | No | ||
| 24 | CHKA | 1442277_at 1445795_at 1450264_a_at 1453582_at | 15108 | -0.081 | -0.4785 | No | ||
| 25 | HMMR | 1425815_a_at 1427541_x_at 1429871_at 1450156_a_at 1450157_a_at | 15168 | -0.085 | -0.4793 | No | ||
| 26 | PRKCZ | 1418085_at 1449692_at 1454902_at | 15768 | -0.114 | -0.5042 | No | ||
| 27 | ID4 | 1423259_at 1423260_at 1438441_at 1450928_at | 16167 | -0.139 | -0.5194 | No | ||
| 28 | PKP1 | 1449586_at | 16433 | -0.158 | -0.5281 | No | ||
| 29 | ID2 | 1422537_a_at 1435176_a_at 1453596_at | 17408 | -0.251 | -0.5672 | No | ||
| 30 | KLF10 | 1416029_at | 17950 | -0.319 | -0.5851 | No | ||
| 31 | TGM2 | 1417500_a_at 1426004_a_at 1433428_x_at 1437277_x_at 1438942_x_at 1455900_x_at | 19234 | -0.554 | -0.6318 | No | ||
| 32 | STAT5A | 1421469_a_at 1450259_a_at | 19785 | -0.702 | -0.6418 | Yes | ||
| 33 | SGK | 1416041_at | 20087 | -0.813 | -0.6380 | Yes | ||
| 34 | TIAM1 | 1418057_at 1444373_at 1453887_a_at | 20128 | -0.828 | -0.6220 | Yes | ||
| 35 | IRF6 | 1418301_at | 20304 | -0.891 | -0.6108 | Yes | ||
| 36 | JUP | 1426873_s_at | 20476 | -0.969 | -0.5978 | Yes | ||
| 37 | CA2 | 1448752_at | 20594 | -1.044 | -0.5806 | Yes | ||
| 38 | FLNA | 1426677_at | 20659 | -1.088 | -0.5601 | Yes | ||
| 39 | RARA | 1450180_a_at | 20869 | -1.233 | -0.5431 | Yes | ||
| 40 | ARHGEF1 | 1421164_a_at 1440403_at | 21451 | -1.983 | -0.5269 | Yes | ||
| 41 | DUSP1 | 1448830_at | 21513 | -2.123 | -0.4840 | Yes | ||
| 42 | KLF2 | 1448890_at | 21716 | -2.815 | -0.4326 | Yes | ||
| 43 | ATP1A1 | 1423653_at 1435919_at 1435920_x_at 1451071_a_at 1458868_at | 21758 | -2.992 | -0.3700 | Yes | ||
| 44 | BCL6 | 1421818_at 1450381_a_at | 21807 | -3.243 | -0.3023 | Yes | ||
| 45 | EGR1 | 1417065_at | 21809 | -3.263 | -0.2321 | Yes | ||
| 46 | NNT | 1416105_at 1432608_at 1456573_x_at | 21813 | -3.281 | -0.1616 | Yes | ||
| 47 | TSC22D1 | 1425742_a_at 1433899_x_at 1447360_at 1454758_a_at 1454971_x_at 1456132_x_at | 21856 | -3.634 | -0.0852 | Yes | ||
| 48 | EGR2 | 1427682_a_at 1427683_at | 21887 | -4.118 | 0.0021 | Yes |
