Details for gene set CHEN_HOXA5_TARGETS

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	CHEN_HOXA5_TARGETS_UP
Enrichment Score (ES)	-0.5193247
Normalized Enrichment Score (NES)	-1.7185256
Nominal p-value	0.0
FDR q-value	0.13200581
FWER p-Value	0.868

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RBM39	1420982_at 1426671_a_at 1438397_a_at 1438398_at 1438420_at 1439316_at 1456386_at	185	2.453	0.0146	No
2	ASNS	1433966_x_at 1451095_at	229	2.261	0.0340	No
3	CEBPB	1418901_at 1427844_a_at	421	1.731	0.0415	No
4	DCLRE1C	1457679_at 1458361_at	603	1.467	0.0470	No
5	NFIL3	1418932_at	939	1.156	0.0425	No
6	FEM1C	1428890_at 1438075_at	1072	1.075	0.0466	No
7	SNX5	1417646_a_at 1417647_at 1417648_s_at 1437074_at 1448791_at	1078	1.070	0.0565	No
8	TUFT1	1416689_at 1444694_at	1188	1.010	0.0610	No
9	CHAC1	1451382_at	1297	0.945	0.0649	No
10	CCNL1	1423622_a_at 1437383_at	1459	0.864	0.0657	No
11	PTN	1416211_a_at 1443173_at 1443809_at 1448254_at	1478	0.859	0.0729	No
12	PTPN2	1417140_a_at 1425197_at 1425198_at 1438562_a_at	1547	0.831	0.0777	No
13	CARS	1427330_at 1452394_at	1909	0.698	0.0676	No
14	NUPL1	1424389_at 1424390_at 1429878_a_at	2192	0.613	0.0605	No
15	ZCCHC10	1418820_s_at	2441	0.560	0.0544	No
16	RIC8B	1435096_at 1439724_at	2534	0.538	0.0552	No
17	TNFRSF10B	1421296_at 1422344_s_at	2612	0.522	0.0566	No
18	GAD1	1416561_at 1416562_at	2626	0.519	0.0609	No
19	RABGGTB	1419553_a_at	2632	0.518	0.0655	No
20	SCYL3	1428918_at 1446655_at 1452960_at	2757	0.491	0.0645	No
21	CTH	1426243_at	2896	0.465	0.0625	No
22	CENPC1	1420441_at	2899	0.464	0.0668	No
23	TANK	1421640_a_at 1441513_at 1459668_at	2926	0.461	0.0699	No
24	JOSD3	1430147_a_at 1430271_x_at 1436558_at 1442289_at 1452635_x_at 1452987_at 1457292_at	2985	0.451	0.0715	No
25	PPIG	1434475_at 1435341_at 1436505_at	3123	0.431	0.0693	No
26	NFKBIE	1431843_a_at 1458299_s_at	3132	0.430	0.0730	No
27	ATF3	1449363_at	3225	0.420	0.0727	No
28	CLK4	1422886_a_at 1427663_a_at	3527	0.385	0.0625	No
29	TIPARP	1426721_s_at 1452160_at 1452161_at	3676	0.367	0.0592	No
30	KIN	1427317_at	3727	0.362	0.0603	No
31	FOSB	1422134_at	3800	0.354	0.0603	No
32	WDR67	1434241_at 1442286_at 1444689_at 1458158_at	3817	0.352	0.0629	No
33	TMEFF1	1426649_at 1441890_x_at	3888	0.346	0.0630	No
34	ZRF1	1417657_s_at 1425910_at 1448794_s_at 1454219_at	4323	0.312	0.0460	No
35	RYBP	1421111_at	4400	0.307	0.0454	No
36	TPTE	1427690_a_at	4566	0.296	0.0406	No
37	PSPC1	1423192_at 1423193_at 1444748_at 1444957_at 1457723_at	4897	0.276	0.0280	No
38	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	4907	0.276	0.0302	No
39	DUSP8	1418714_at	5084	0.265	0.0246	No
40	RLF	1427171_at 1439555_at 1440020_at 1446057_at 1447164_at	5275	0.255	0.0183	No
41	STC2	1419503_at 1445186_at 1449484_at	5284	0.255	0.0203	No
42	TAF2	1434238_at 1457351_at	5454	0.246	0.0149	No
43	CARF	1425313_at	5501	0.243	0.0151	No
44	HRH1	1419210_at 1438494_at	5529	0.242	0.0161	No
45	EIF5	1415723_at 1433631_at 1454663_at 1454664_a_at 1456256_at	5633	0.236	0.0136	No
46	SETDB1	1416670_at 1420974_at 1451833_a_at 1458215_at	6010	0.220	-0.0016	No
47	TRPC1	1421095_a_at 1421096_at	6101	0.217	-0.0037	No
48	NOC3L	1426286_at	6306	0.208	-0.0111	No
49	CREB5	1440089_at 1442576_at 1457222_at	6831	0.188	-0.0334	No
50	TLK2	1416944_a_at 1431827_a_at 1454018_at 1457357_at	7262	0.173	-0.0515	No
51	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	7278	0.173	-0.0506	No
52	SNAI2	1418673_at 1447643_x_at	7347	0.170	-0.0521	No
53	ARID4B	1431024_a_at 1431031_at 1435768_at 1446317_at 1451847_s_at 1460384_a_at	7454	0.167	-0.0554	No
54	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	7642	0.161	-0.0625	No
55	KIF18A	1424107_at 1457895_at	8275	0.140	-0.0902	No
56	LIF	1421206_at 1421207_at 1450160_at	9456	0.104	-0.1434	No
57	SPATA5L1	1455863_at	9849	0.092	-0.1605	No
58	POLR3F	1429686_at 1430328_at 1431999_at 1439075_at 1451773_s_at	10033	0.087	-0.1681	No
59	SUV420H1	1434999_at 1442764_at 1451817_at 1455171_at	10177	0.083	-0.1739	No
60	SEC24A	1433934_at 1438121_at	10389	0.077	-0.1829	No
61	PMAIP1	1418203_at	10485	0.074	-0.1865	No
62	AGTPBP1	1429933_at 1432385_a_at	10517	0.073	-0.1873	No
63	CASP3	1426165_a_at 1430192_at 1449839_at	10713	0.067	-0.1956	No
64	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	10720	0.067	-0.1952	No
65	CNOT2	1436980_x_at 1445017_at 1447212_at 1454602_s_at 1454603_a_at 1456576_x_at	10742	0.066	-0.1956	No
66	SEC31A	1453014_a_at	10824	0.064	-0.1987	No
67	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	10931	0.061	-0.2030	No
68	RIPK2	1421236_at 1450173_at	11268	0.052	-0.2179	No
69	THUMPD2	1428726_at	11338	0.050	-0.2206	No
70	TAF1A	1419702_at	11499	0.045	-0.2276	No
71	DLX2	1448877_at	11679	0.040	-0.2354	No
72	SOX30	1440509_at	12007	0.030	-0.2501	No
73	FOSL2	1422931_at	12045	0.029	-0.2516	No
74	DAAM1	1431035_at 1455244_at 1458662_at	12063	0.028	-0.2521	No
75	HLX1	1418939_at	12295	0.021	-0.2625	No
76	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12366	0.019	-0.2655	No
77	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	12372	0.019	-0.2656	No
78	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	12451	0.017	-0.2690	No
79	SMCHD1	1428251_at 1442497_at	12458	0.017	-0.2691	No
80	BDKRB1	1450586_at	12565	0.013	-0.2739	No
81	STRN3	1423535_at 1423536_at 1441050_at 1441266_at 1457343_at	12712	0.009	-0.2805	No
82	NSUN6	1427491_at 1432012_a_at	12847	0.005	-0.2866	No
83	CHD9	1435688_at 1441339_at 1457672_at 1458078_at 1459450_at	13035	-0.002	-0.2952	No
84	PRKRIP1	1417425_at 1442084_at 1442598_at	13202	-0.007	-0.3027	No
85	SNX16	1424276_at 1438803_s_at 1456041_at	13211	-0.008	-0.3030	No
86	PTBP2	1423470_at 1423471_at 1444746_at 1446490_at 1458757_at	13430	-0.015	-0.3129	No
87	CAB39	1418432_at 1418433_at	13857	-0.031	-0.3322	No
88	PTGS2	1417262_at 1417263_at	14127	-0.041	-0.3442	No
89	F3	1417408_at	14164	-0.042	-0.3454	No
90	CEP76	1437209_at 1437254_at	14199	-0.044	-0.3466	No
91	INTS6	1423274_at 1423275_at 1436089_at 1443128_at	14329	-0.048	-0.3520	No
92	BCL10	1418970_a_at 1418971_x_at 1418972_at 1443524_x_at	14546	-0.057	-0.3614	No
93	ZZZ3	1434332_at 1438487_s_at 1441748_at	14629	-0.060	-0.3646	No
94	SAT1	1420502_at	14839	-0.069	-0.3736	No
95	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	14927	-0.072	-0.3769	No
96	TNFAIP3	1433699_at 1450829_at	15052	-0.078	-0.3819	No
97	VEGF	1420909_at 1451959_a_at	15178	-0.085	-0.3868	No
98	ZNF35	1460252_s_at	15770	-0.114	-0.4129	No
99	ZNF3	1420675_at	15920	-0.123	-0.4186	No
100	PPWD1	1456359_at	16194	-0.141	-0.4298	No
101	DPP8	1428697_at 1431064_at 1445705_x_at	16255	-0.145	-0.4312	No
102	JUN	1417409_at 1448694_at	16418	-0.157	-0.4371	No
103	GEM	1426063_a_at	16465	-0.160	-0.4377	No
104	KLF5	1430255_at 1451021_a_at 1451739_at	16500	-0.163	-0.4378	No
105	DSCR1	1416600_a_at 1416601_a_at	16568	-0.168	-0.4393	No
106	WAC	1437426_at 1439249_at 1444241_at 1451494_at 1451495_at 1457559_at 1458471_at	16629	-0.174	-0.4404	No
107	FBXO38	1452255_at	16940	-0.200	-0.4527	No
108	SCG5	1423150_at 1446755_at	17445	-0.254	-0.4735	No
109	ZCCHC6	1433910_at 1441986_at 1448037_at	17609	-0.275	-0.4784	No
110	SFPQ	1423795_at 1423796_at 1436898_at 1438458_a_at 1438459_x_at 1439058_at	17679	-0.282	-0.4789	No
111	RCHY1	1432144_a_at	17730	-0.288	-0.4785	No
112	CNOT4	1420999_at 1421000_at 1436645_a_at 1437586_at 1443169_at 1450083_at 1459449_at	17835	-0.301	-0.4804	No
113	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	17899	-0.310	-0.4804	No
114	ADNP	1423069_at	17917	-0.314	-0.4782	No
115	KLF10	1416029_at	17950	-0.319	-0.4767	No
116	NEK1	1434267_at 1438592_at 1453612_at 1458211_at	18055	-0.330	-0.4783	No
117	PCTK2	1435143_at 1446130_at 1446272_at	18078	-0.335	-0.4762	No
118	TBK1	1422469_at 1445571_at 1460315_s_at	18339	-0.371	-0.4846	No
119	CLK1	1426124_a_at	18723	-0.438	-0.4981	No
120	KLF6	1418280_at 1427742_a_at 1433508_at 1447448_s_at 1459718_x_at	18852	-0.464	-0.4996	No
121	MAFF	1418936_at	18877	-0.470	-0.4963	No
122	DMTF1	1422636_at 1440349_at 1456697_x_at	19162	-0.535	-0.5043	No
123	FNBP4	1423191_at 1438700_at	19427	-0.602	-0.5107	No
124	CEBPG	1425261_at 1425262_at 1451639_at	19615	-0.648	-0.5132	Yes
125	SLTM	1424452_at 1429624_at 1443426_at 1445720_at 1456683_at	19730	-0.685	-0.5120	Yes
126	MORC3	1420091_s_at 1420092_at 1452224_at	19807	-0.710	-0.5088	Yes
127	GPATC2	1420528_at 1440329_s_at 1445189_at 1452498_at 1458566_at	19838	-0.721	-0.5034	Yes
128	RBM15	1434514_at	19910	-0.747	-0.4996	Yes
129	PRPF3	1424314_at 1457390_at	19922	-0.752	-0.4930	Yes
130	JMJD1A	1426810_at	19993	-0.776	-0.4889	Yes
131	BACH1	1440831_at 1449311_at	20069	-0.807	-0.4848	Yes
132	MARK3	1418316_a_at	20071	-0.808	-0.4772	Yes
133	BIRC2	1418854_at	20095	-0.816	-0.4706	Yes
134	RNF111	1423304_a_at	20145	-0.833	-0.4650	Yes
135	FOS	1423100_at	20292	-0.887	-0.4633	Yes
136	LIG4	1439487_at	20309	-0.893	-0.4556	Yes
137	PGS1	1430429_at 1440367_at 1454045_a_at 1454046_x_at 1455229_x_at	20419	-0.940	-0.4517	Yes
138	IFRD1	1416067_at 1442014_at	20499	-0.983	-0.4461	Yes
139	PELI1	1417371_at 1417372_a_at 1431060_at 1431061_s_at 1444017_at 1459272_at	20620	-1.063	-0.4416	Yes
140	SUHW4	1426556_at 1457455_at	20649	-1.080	-0.4327	Yes
141	IRF7	1417244_a_at	20661	-1.089	-0.4230	Yes
142	IHPK2	1428373_at 1435319_at	20773	-1.165	-0.4171	Yes
143	IER2	1416442_at	20846	-1.216	-0.4089	Yes
144	AKAP10	1421121_at 1428482_at 1441829_s_at 1447570_s_at	20868	-1.232	-0.3983	Yes
145	SDCCAG1	1425697_at 1429327_at 1429446_at 1435020_at	20873	-1.236	-0.3868	Yes
146	GADD45B	1420197_at 1449773_s_at 1450971_at	20874	-1.236	-0.3752	Yes
147	ZCCHC8	1423755_at 1441639_at	20886	-1.249	-0.3639	Yes
148	TSC22D2	1430535_at 1453012_at	20926	-1.285	-0.3536	Yes
149	BIRC3	1421392_a_at 1425223_at	20998	-1.351	-0.3441	Yes
150	RELB	1417856_at	21067	-1.442	-0.3336	Yes
151	DUSP5	1437199_at	21089	-1.461	-0.3208	Yes
152	ARNTL	1425099_a_at 1446544_at 1457740_at	21105	-1.477	-0.3076	Yes
153	ARIH1	1427188_at 1427189_at 1436498_at 1441022_at 1459397_at 1460090_at	21144	-1.526	-0.2949	Yes
154	CRY1	1433733_a_at	21191	-1.574	-0.2822	Yes
155	PRPF38B	1428674_at 1452869_at 1455016_at 1456506_at	21238	-1.644	-0.2688	Yes
156	NCOA3	1422737_at 1457214_at 1458039_at	21243	-1.650	-0.2535	Yes
157	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	21342	-1.790	-0.2411	Yes
158	JUNB	1415899_at	21415	-1.913	-0.2264	Yes
159	DUSP6	1415834_at	21419	-1.924	-0.2084	Yes
160	MARCH7	1420609_at 1436893_a_at 1440966_at 1443329_at 1458690_at	21524	-2.152	-0.1929	Yes
161	FOXO3A	1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at	21546	-2.180	-0.1733	Yes
162	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	21588	-2.295	-0.1535	Yes
163	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21594	-2.314	-0.1319	Yes
164	NEDD9	1422818_at 1437132_x_at 1447885_x_at 1450767_at	21772	-3.051	-0.1113	Yes
165	EGR1	1417065_at	21809	-3.263	-0.0822	Yes
166	TSC22D1	1425742_a_at 1433899_x_at 1447360_at 1454758_a_at 1454971_x_at 1456132_x_at	21856	-3.634	-0.0500	Yes
167	ETS2	1416268_at 1437809_x_at 1447685_x_at	21919	-5.684	0.0007	Yes