Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
| Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | TRANSPORT_VESICLE |
| Enrichment Score (ES) | -0.6670618 |
| Normalized Enrichment Score (NES) | -1.591429 |
| Nominal p-value | 0.008213553 |
| FDR q-value | 0.401602 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PLEKHF2 | 1423861_at 1423862_at | 723 | 1.424 | 0.0417 | No | ||
| 2 | AP1S1 | 1416087_at | 2354 | 0.540 | -0.0044 | No | ||
| 3 | GALNTL2 | 1429235_at 1429236_at | 3189 | 0.389 | -0.0220 | No | ||
| 4 | SPG21 | 1451036_at | 3829 | 0.322 | -0.0343 | No | ||
| 5 | LDLRAP1 | 1424378_at 1457162_at | 3846 | 0.321 | -0.0182 | No | ||
| 6 | CAV2 | 1417327_at 1425955_at | 5492 | 0.231 | -0.0812 | No | ||
| 7 | SYT13 | 1434470_at 1451045_at | 6187 | 0.205 | -0.1021 | No | ||
| 8 | PAMCI | 1427942_at | 11868 | 0.056 | -0.3584 | No | ||
| 9 | BGN | 1416405_at 1437889_x_at 1448323_a_at | 11888 | 0.055 | -0.3563 | No | ||
| 10 | RAB14 | 1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at | 12397 | 0.043 | -0.3772 | No | ||
| 11 | APH1B | 1435793_at 1456500_at | 12593 | 0.039 | -0.3841 | No | ||
| 12 | AP1GBP1 | 1435215_at 1442344_at 1457695_at | 15764 | -0.059 | -0.5257 | No | ||
| 13 | AP1G2 | 1419113_at | 15913 | -0.066 | -0.5289 | No | ||
| 14 | NRSN1 | 1418588_at | 16600 | -0.105 | -0.5547 | No | ||
| 15 | CRISPLD2 | 1434758_at 1437056_x_at 1460458_at | 16967 | -0.131 | -0.5646 | No | ||
| 16 | SSPN | 1417644_at 1417645_at | 17564 | -0.186 | -0.5820 | No | ||
| 17 | FURIN | 1418518_at | 18278 | -0.279 | -0.5999 | No | ||
| 18 | GOPC | 1421191_s_at 1450153_at 1453221_at | 18541 | -0.312 | -0.5955 | No | ||
| 19 | YIPF1 | 1424196_at 1442647_at | 18821 | -0.359 | -0.5894 | No | ||
| 20 | ATP7A | 1418774_a_at 1436921_at | 20523 | -0.881 | -0.6208 | Yes | ||
| 21 | AP3S1 | 1422593_at | 20727 | -1.015 | -0.5768 | Yes | ||
| 22 | YIPF2 | 1420668_a_at 1438415_s_at | 21735 | -2.827 | -0.4745 | Yes | ||
| 23 | YIPF3 | 1444012_at 1451284_at | 21770 | -2.970 | -0.3203 | Yes | ||
| 24 | IGF2R | 1424111_at 1424112_at 1440979_at 1445966_at 1457356_at | 21786 | -3.055 | -0.1607 | Yes | ||
| 25 | STEAP2 | 1428636_at 1438773_at 1442359_at 1444290_at 1446071_at | 21806 | -3.194 | 0.0059 | Yes |
