DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetPROTEIN_AMINO_ACID_PHOSPHORYLATION
Enrichment Score (ES)-0.47664437
Normalized Enrichment Score (NES)-1.6115136
Nominal p-value0.0
FDR q-value0.35761353
FWER p-Value0.995
Table: GSEA Results Summary



Fig 1: Enrichment plot: PROTEIN_AMINO_ACID_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RIPK41418487_at 1418488_s_at633.8590.0203No
2IL51425546_a_at 1442049_at 1450550_at1303.2320.0367No
3AKT11416657_at 1425711_a_at 1440950_at 1442759_at1822.9330.0520No
4CSK1423518_at 1439744_at2892.3440.0612No
5JAK31425750_a_at 1446515_at3082.2930.0741No
6TRIB21426640_s_at 1426641_at 1459852_x_at3402.1860.0858No
7ACVR11416786_at 1416787_at 1448460_at 1457551_at4551.9220.0921No
8CCND11417419_at 1417420_at 1448698_at5041.8210.1009No
9PRKAA21429463_at 1429464_at5371.7460.1099No
10FGR1419526_at 1442804_at5781.6700.1181No
11RPS6KA41438243_at 1448498_at6571.5100.1236No
12DAPK21451453_at8331.2940.1233No
13WNK21453355_at 1455424_at9581.1850.1247No
14NDUFS41418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at11661.0140.1212No
15CDK91417269_at 1457240_at12070.9890.1253No
16COL4A3BP1420383_a_at 1420384_at 1449847_a_at 1452867_at12160.9840.1309No
17STK31418512_at 1418513_at 1446289_at 1446627_at 1449114_at13790.8940.1288No
18CDK2AP11426885_a_at 1435509_x_at 1456314_x_at14190.8780.1323No
19PRDX41416166_a_at 1416167_at 1431269_at14570.8590.1357No
20TTN1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at14660.8540.1405No
21GSG21450886_at16580.7610.1363No
22MATK1421739_a_at 1432329_a_at16880.7460.1394No
23SNF1LK21444472_at 1457276_at17920.7080.1389No
24DYRK31424229_at18500.6890.1404No
25NUAK21429049_at19160.6620.1414No
26GMFB1417069_a_at 1431686_a_at 1431687_at 1448570_at 1448571_a_at20110.6320.1409No
27VRK11425006_a_at 1458951_at20900.6090.1409No
28IKBKAP1424142_at 1451254_at21510.5910.1417No
29MAST21417324_at 1440321_at 1441847_at 1444813_at 1456927_at 1459558_at22040.5780.1428No
30PCTK21435143_at 1446130_at 1446272_at23350.5440.1401No
31MAPK81420931_at 1420932_at 1437045_at 1440856_at 1457936_at23630.5380.1421No
32EPHA81419341_at32640.3800.1029No
33LIMK11417627_a_at 1425836_a_at 1456234_at 1458989_at33360.3700.1018No
34STK101417751_at 1459736_at33850.3660.1018No
35F21418897_at34050.3630.1031No
36RAGE1441128_at 1449476_at34770.3540.1020No
37LTK1460300_a_at34910.3520.1035No
38RET1421359_at36160.3400.0998No
39BCR1427265_at 1452368_at 1455564_at36730.3350.0992No
40JAK21421065_at 1421066_at38050.3240.0951No
41MAP3K61449901_a_at38150.3230.0967No
42MAP2K61426850_a_at 1459292_at41400.2980.0835No
43VRK21451929_a_at 1453343_s_at41510.2980.0849No
44PRKCE1437860_at 1437861_s_at 1442609_at 1444649_at 1449956_at 1452878_at41920.2950.0848No
45STK161426160_a_at42610.2910.0834No
46IL12A1425454_a_at42790.2900.0844No
47GRK11421361_at43960.2810.0807No
48TSSK31418557_s_at 1432397_at44490.2790.0800No
49FASTK1460635_at44530.2790.0815No
50PRKCZ1418085_at 1449692_at 1454902_at45360.2740.0794No
51HCLS11418842_at45530.2730.0803No
52EPHB21425015_at 1425016_at 1442471_at 1445417_at 1454022_at47290.2650.0738No
53MAP4K41422615_at 1440609_at 1448050_s_at 1459912_at48390.2590.0703No
54ERBB21424919_at49790.2530.0655No
55TRIB11424880_at 1424881_at50440.2510.0640No
56AURKC1449364_at52660.2410.0553No
57FES1427368_x_at 1452410_a_at52870.2400.0558No
58PMVK1427893_a_at53960.2360.0522No
59CD811416330_at54930.2310.0492No
60IL31RA1445095_at 1451535_at55180.2300.0495No
61EIF2AK41421389_a_at 1443235_at55790.2280.0481No
62ROCK21423592_at 1451041_at56250.2260.0474No
63CCL21420380_at56370.2260.0482No
64MAST11432255_at 1449423_at56990.2230.0467No
65MERTK1422869_at57210.2230.0471No
66BRSK21431826_a_at 1439329_a_at 1459639_at58400.2180.0430No
67TYK21417306_at61390.2070.0305No
68MAPKAPK21426648_at61620.2060.0307No
69MAPK121447823_x_at 1449283_a_at63510.2000.0232No
70TESK21426546_at64510.1970.0199No
71TSSK41432045_at 1432101_a_at 1438486_at 1443810_at66120.1910.0136No
72IL31450566_at66330.1900.0139No
73STK111418644_a_at68770.1820.0037No
74ALS2CR21433544_at 1442452_at69910.179-0.0004No
75BMP41422912_at69930.1790.0006No
76ADAM101450104_at 1460083_at70170.1780.0006No
77MKNK11417630_at 1417631_at 1454119_at71130.175-0.0027No
78PAK11420979_at 1420980_at 1450070_s_at 1459029_at71720.174-0.0043No
79ERN21450139_at71880.173-0.0040No
80SRPK11454042_a_at 1455107_at73670.168-0.0112No
81TNK11422721_at 1425634_a_at 1425635_at73740.167-0.0104No
82WNK41427196_at 1444133_at75570.162-0.0179No
83MAP3K31426686_s_at 1426687_at 1436522_at75830.161-0.0180No
84ACVRL11435825_at 1451604_a_at75920.161-0.0174No
85MAP3K21422250_at75960.161-0.0166No
86BRSK11439892_at76470.159-0.0180No
87BMPR1A1425491_at 1425492_at 1425493_at 1425494_s_at 1445413_at 1451729_at78230.154-0.0251No
88MAP3K131430137_at 1440749_at 1447699_at78620.153-0.0259No
89BTK1422755_at79140.151-0.0274No
90MAP3K91432981_at 1442218_at 1455684_at 1458922_at79560.150-0.0284No
91STK191417334_at79690.150-0.0280No
92ICK1448310_at 1454243_at 1455687_at83040.141-0.0426No
93WNK31443924_at83580.140-0.0442No
94INSR1421380_at 1450225_at84000.139-0.0452No
95UHMK11446120_at 1454260_at87340.131-0.0598No
96MKNK21418300_a_at 1449029_at87550.130-0.0599No
97MYLK1425504_at 1425505_at 1425506_at88980.127-0.0657No
98MAPK41435367_at91650.120-0.0773No
99NEK41427639_a_at 1449861_at91660.120-0.0765No
100CARD141450142_a_at91900.119-0.0769No
101KALRN1429796_at 1436066_at 1442341_at 1442554_s_at 1445900_at 1448023_at 1457690_at 1457899_at 1459065_at93130.116-0.0818No
102BMX1422084_at93940.114-0.0848No
103EPHA51420557_at 1437920_at 1444690_at95500.111-0.0913No
104IRAK31430704_at 1435040_at95850.110-0.0922No
105ABL11423999_at 1441291_at 1444134_at 1445153_at98600.103-0.1042No
106CCL111417789_at100240.099-0.1111No
107NF21421820_a_at 1427708_a_at 1450382_at 1451829_a_at100820.098-0.1132No
108TSSK21449489_at101070.097-0.1137No
109ERN11421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at103670.091-0.1251No
110EIF2AK31430371_x_at 1449278_at 1453505_a_at104660.089-0.1291No
111TSSK61418956_at105310.088-0.1315No
112MARK41439051_a_at 1456618_at106450.085-0.1362No
113SNF1LK1419766_at 1459601_at106870.084-0.1376No
114ABL21445483_at 1447127_at106980.084-0.1375No
115IL201421608_at107280.083-0.1384No
116MYOD11418420_at 1447675_x_at108230.081-0.1422No
117PRKG21421354_at 1435162_at 1435460_at111100.074-0.1550No
118IGFBP31423062_at 1458268_s_at111270.074-0.1553No
119PRKG11443663_at 1443811_at 1443812_x_at 1444232_at 1445807_at 1445998_at 1449876_at112120.072-0.1587No
120PRKD11422673_at112590.071-0.1604No
121CAMK11417604_at113760.069-0.1653No
122PRKCI1417410_s_at 1448695_at114470.067-0.1682No
123TAF11447417_at 1455513_at 1458744_at115300.064-0.1716No
124SRPK21417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at115730.063-0.1731No
125ERG1425370_a_at 1440244_at116760.061-0.1775No
126PTK61442923_at 1450271_at117310.059-0.1796No
127BMPR1B1422872_at 1437312_at 1443720_s_at117790.058-0.1814No
128DMPK1422989_a_at 1434944_at119750.053-0.1901No
129CD801427717_at 1432826_a_at 1440592_at 1451950_a_at 1454372_at 1457952_at121120.050-0.1961No
130MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at124460.042-0.2112No
131ROCK11423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at126370.038-0.2197No
132MAP3K101436373_at 1440500_at 1457456_at 1458651_at126650.037-0.2207No
133MAPK151441755_at127970.034-0.2266No
134STK38L1435877_at 1435878_at 1455183_at129720.030-0.2344No
135EGFR1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at131590.025-0.2428No
136ACVR1B1422098_at 1433725_at135560.014-0.2610No
137MOBKL1A1430564_at 1455184_at135710.013-0.2616No
138MAP4K31444406_at136840.010-0.2667No
139SGK31420918_at 1420919_at 1450036_at138530.006-0.2744No
140IHPK31443503_at138890.005-0.2760No
141STK361434733_at 1453584_at139490.003-0.2787No
142ERC11421501_a_at 1424247_at 1441493_at 1444356_at 1451279_at140360.001-0.2826No
143CSNK1G21423370_a_at14329-0.008-0.2961No
144TDGF11450989_at14450-0.012-0.3015No
145MARK11419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at14733-0.021-0.3144No
146FRK1421362_a_at 1426569_a_at 1426570_a_at 1436413_at 1440948_at14742-0.021-0.3146No
147MAPK31427060_at14783-0.022-0.3163No
148PKN31434525_at14898-0.026-0.3214No
149PXK1451253_at15263-0.039-0.3380No
150CDKL11429664_at 1453231_at15325-0.042-0.3406No
151LIPE1422820_at15340-0.043-0.3409No
152DYRK1B1422254_a_at15455-0.047-0.3459No
153MYO3A1431983_at15492-0.048-0.3473No
154CBLC1422666_at 1431692_a_at15598-0.052-0.3518No
155LATS11427679_at 1460264_at15672-0.055-0.3549No
156RAF11416078_s_at 1425419_a_at15837-0.063-0.3620No
157EIF2AK11421900_at 1421901_at 1430696_at 1436006_at 1453902_at15905-0.066-0.3647No
158PLK41419838_s_at 1426580_at 1452115_a_at15985-0.070-0.3680No
159TGFBR11420893_a_at 1420894_at 1420895_at 1446946_at16054-0.073-0.3707No
160NEK61451043_at16056-0.073-0.3703No
161ERBB31434606_at 1452482_at16096-0.075-0.3716No
162NEK111441525_at 1445012_at16298-0.085-0.3804No
163CAMK2A1437125_at 1441734_at 1442707_at 1443876_at 1452453_a_at 1457311_at16595-0.105-0.3934No
164CDC2L11418841_s_at16602-0.105-0.3930No
165CDC42BPB1434652_at 1459167_at16755-0.116-0.3993No
166AKT31422078_at 1435260_at 1435879_at 1443222_at 1460307_at16777-0.117-0.3996No
167TAOK31435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at16820-0.120-0.4008No
168RPS6KA51431050_at 1437625_at 1439004_at 1440343_at16864-0.123-0.4021No
169PKN21437295_at 1437296_at16897-0.126-0.4028No
170CTBP11415702_a_at16904-0.126-0.4023No
171MAPK61419168_at 1419169_at 1429963_at 1459146_at16941-0.129-0.4032No
172ILK1449942_a_at17124-0.144-0.4107No
173DAPK11426915_at 1427358_a_at 1445032_at17131-0.145-0.4101No
174LATS21419678_at 1419679_at 1425420_s_at 1426156_at 1437101_at 1439441_x_at17351-0.166-0.4192No
175PRKCD1422847_a_at 1442256_at17365-0.167-0.4188No
176DAPK31423446_at 1456496_at17381-0.169-0.4185No
177CCNT11419313_at 1456477_at17385-0.169-0.4176No
178PLK31434496_at17627-0.194-0.4276No
179PRKAA11437539_at17704-0.201-0.4299No
180MINK11449362_a_at17786-0.211-0.4323No
181PRKCH1422079_at 1434248_at17855-0.218-0.4342No
182CAMK2B1448676_at 1455869_at18040-0.244-0.4412No
183BRAF1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at18093-0.251-0.4421No
184IRAK21436507_at18179-0.264-0.4444No
185MAP3K81419208_at18259-0.276-0.4464No
186PKN11458674_at 1459231_at18267-0.277-0.4450No
187HCK1446553_at 1449455_at18436-0.299-0.4510No
188TLK21416944_a_at 1431827_a_at 1454018_at 1457357_at18546-0.313-0.4541No
189TNKS1432630_at 1433778_at 1445358_at 1459910_at18659-0.330-0.4573No
190PRPF4B1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at18750-0.345-0.4594No
191PCTK11415956_a_at 1438314_at 1443296_at 1460169_a_at19038-0.403-0.4702No
192CAMKK21424474_a_at 1424475_at 1424476_at 1455401_at19054-0.407-0.4684No
193PICK11419384_at19083-0.413-0.4672No
194SRP721428876_at 1428877_at19089-0.414-0.4650No
195MAP3K111450669_at19151-0.429-0.4652No
196CDC42BPG1436197_at19160-0.431-0.4630No
197OXSR11426933_at19271-0.455-0.4653No
198MARK21415952_at 1415953_s_at 1435889_at 1444303_at19325-0.468-0.4650No
199ULK11416504_at 1448370_at19441-0.493-0.4673No
200CCND31415907_at 1437584_at 1444323_at 1446567_at 1447434_at 1457549_at19489-0.507-0.4664No
201LMTK21439871_at 1455018_at 1459531_at19490-0.507-0.4634No
202PRKX1424286_at 1424287_at 1451299_at19625-0.544-0.4663No
203CSNK1A11424827_a_at 1428537_at 1430529_at 1451497_at 1456216_at19715-0.569-0.4670No
204LCK1425396_a_at 1439145_at 1439146_s_at 1457917_at19798-0.593-0.4672No
205MAP3K121417115_at 1438908_at 1456565_s_at19888-0.618-0.4676No
206PIM11423006_at 1435458_at19899-0.622-0.4643No
207DYRK21428637_at 1436918_at 1456502_at 1457667_x_at19965-0.648-0.4634No
208CSNK1D1415825_s_at 1418889_a_at 1437690_x_at 1444378_at 1449932_at 1456727_a_at20071-0.686-0.4641No
209PINK11441937_s_at 1451148_at20105-0.699-0.4614No
210CLCF11437270_a_at 1437271_at 1450262_at20436-0.841-0.4716Yes
211DYRK1A1426226_at 1428299_at 1451977_at20498-0.869-0.4692Yes
212ABI31446191_at 1452928_at20625-0.934-0.4694Yes
213CHUK1417091_at 1428210_s_at 1451383_a_at20646-0.945-0.4646Yes
214SNRK1425678_a_at 1448864_at20689-0.985-0.4606Yes
215TNK21448298_at20764-1.043-0.4578Yes
216ABI21433985_at 1436984_at 1444783_at 1458053_at 1460153_at20791-1.058-0.4526Yes
217SOCS11440047_at 1450446_a_at20823-1.082-0.4475Yes
218PIM21417216_at20918-1.164-0.4449Yes
219ITGB21450678_at20924-1.167-0.4381Yes
220FYB1452117_a_at20961-1.211-0.4325Yes
221CSNK2A11419034_at 1419035_s_at 1419036_at 1419037_at 1419038_a_at 1453427_at21003-1.246-0.4269Yes
222IKBKE1417813_at21018-1.261-0.4199Yes
223STK381416252_at 1431303_at 1439938_at21035-1.285-0.4129Yes
224STK41421107_at 1434159_at 1436015_s_at21065-1.312-0.4064Yes
225TLK11439158_at 1444730_at 1455024_at 1456407_a_at 1460002_at21119-1.377-0.4006Yes
226HIPK31419191_at 1426819_at21205-1.503-0.3954Yes
227CAMK41421941_at 1426167_a_at 1439843_at 1442822_at 1452572_at21229-1.528-0.3873Yes
228MAP4K21428297_at 1434833_at 1450244_a_at21264-1.570-0.3794Yes
229PRKACB1420610_at 1420611_at 1457197_at21289-1.608-0.3709Yes
230F2R1437308_s_at 1450852_s_at21349-1.696-0.3634Yes
231PRKD31420567_at 1428229_at 1428230_at 1444691_at21436-1.873-0.3561Yes
232STK17B1423452_at 1430165_at 1450997_at21484-1.984-0.3463Yes
233TXK1425785_a_at21497-2.030-0.3347Yes
234PDPK11415729_at 1416501_at 1459775_at 1459776_x_at21531-2.098-0.3236Yes
235ABI11423177_a_at 1423178_at 1450890_a_at21599-2.263-0.3131Yes
236PRKCB11423478_at 1438981_at 1443144_at 1459674_at 1460419_a_at21636-2.405-0.3003Yes
237PAK21434250_at 1454887_at21638-2.412-0.2858Yes
238CDC42BPA1435847_at 1436380_at 1438449_at 1442260_at 1446945_at21693-2.617-0.2726Yes
239CRKRS1425555_at 1425556_at 1438831_at 1440858_at 1443294_at 1455567_at 1455964_at21716-2.778-0.2569Yes
240GMFG1419193_a_at 1419194_s_at21717-2.780-0.2402Yes
241CSNK1E1417175_at 1417176_at 1435373_at21762-2.918-0.2247Yes
242PRKAG11417690_at 1433533_x_at 1457803_at21794-3.115-0.2074Yes
243TGFB11420653_at 1445360_at21809-3.227-0.1886Yes
244STAT11420915_at 1440481_at 1450033_a_at 1450034_at21816-3.247-0.1694Yes
245GSK3B1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at21817-3.254-0.1498Yes
246CCND21416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at21828-3.314-0.1303Yes
247IGF1R1426565_at 1437219_at 1443566_at 1445600_at 1445664_at 1446303_at21844-3.404-0.1106Yes
248WNK11433676_at 1436746_at 1437888_at 1439970_at21868-3.592-0.0900Yes
249TEC1441524_at 1460204_at21901-4.227-0.0661Yes
250AURKA1424511_at 1440129_at21926-5.196-0.0360Yes
251PTK2B1434653_at 1442437_at 1442927_at21933-6.0500.0001Yes
Table: GSEA details [plain text format]



Fig 2: PROTEIN_AMINO_ACID_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PROTEIN_AMINO_ACID_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for PROTEIN_AMINO_ACID_PHOSPHORYLATION