DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetPHOSPHORYLATION
Enrichment Score (ES)-0.48428136
Normalized Enrichment Score (NES)-1.6641138
Nominal p-value0.0
FDR q-value0.33508626
FWER p-Value0.964
Table: GSEA Results Summary



Fig 1: Enrichment plot: PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RIPK41418487_at 1418488_s_at633.8590.0178No
2IL51425546_a_at 1442049_at 1450550_at1303.2320.0321No
3AKT11416657_at 1425711_a_at 1440950_at 1442759_at1822.9330.0455No
4CSK1423518_at 1439744_at2892.3440.0532No
5JAK31425750_a_at 1446515_at3082.2930.0647No
6TRIB21426640_s_at 1426641_at 1459852_x_at3402.1860.0750No
7ACVR11416786_at 1416787_at 1448460_at 1457551_at4551.9220.0800No
8CCND11417419_at 1417420_at 1448698_at5041.8210.0876No
9PRKAA21429463_at 1429464_at5371.7460.0955No
10FGR1419526_at 1442804_at5781.6700.1026No
11RPS6KA41438243_at 1448498_at6571.5100.1071No
12CDKN1A1421679_a_at 1424638_at6891.4630.1135No
13DAPK21451453_at8331.2940.1139No
14WNK21453355_at 1455424_at9581.1850.1145No
15NDUFS41418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at11661.0140.1104No
16CDK91417269_at 1457240_at12070.9890.1138No
17COL4A3BP1420383_a_at 1420384_at 1449847_a_at 1452867_at12160.9840.1187No
18STK31418512_at 1418513_at 1446289_at 1446627_at 1449114_at13790.8940.1161No
19CDK2AP11426885_a_at 1435509_x_at 1456314_x_at14190.8780.1190No
20PRDX41416166_a_at 1416167_at 1431269_at14570.8590.1219No
21TTN1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at14660.8540.1261No
22GSG21450886_at16580.7610.1214No
23MATK1421739_a_at 1432329_a_at16880.7460.1240No
24SNF1LK21444472_at 1457276_at17920.7080.1231No
25DYRK31424229_at18500.6890.1241No
26NUAK21429049_at19160.6620.1247No
27GMFB1417069_a_at 1431686_a_at 1431687_at 1448570_at 1448571_a_at20110.6320.1237No
28VRK11425006_a_at 1458951_at20900.6090.1234No
29IHPK11422968_at 1422969_s_at 1438845_at 1438846_x_at 1452694_at20970.6080.1264No
30UQCRC11428782_a_at21150.6010.1288No
31IKBKAP1424142_at 1451254_at21510.5910.1304No
32MAST21417324_at 1440321_at 1441847_at 1444813_at 1456927_at 1459558_at22040.5780.1311No
33MCM71416030_a_at 1416031_s_at 1438320_s_at22790.5600.1307No
34PCTK21435143_at 1446130_at 1446272_at23350.5440.1311No
35MAPK81420931_at 1420932_at 1437045_at 1440856_at 1457936_at23630.5380.1327No
36EPHA81419341_at32640.3800.0932No
37LIMK11417627_a_at 1425836_a_at 1456234_at 1458989_at33360.3700.0919No
38STK101417751_at 1459736_at33850.3660.0916No
39F21418897_at34050.3630.0927No
40RAGE1441128_at 1449476_at34770.3540.0913No
41LTK1460300_a_at34910.3520.0926No
42RET1421359_at36160.3400.0887No
43BCR1427265_at 1452368_at 1455564_at36730.3350.0879No
44JAK21421065_at 1421066_at38050.3240.0836No
45MAP3K61449901_a_at38150.3230.0849No
46MAP2K61426850_a_at 1459292_at41400.2980.0716No
47VRK21451929_a_at 1453343_s_at41510.2980.0727No
48PRKCE1437860_at 1437861_s_at 1442609_at 1444649_at 1449956_at 1452878_at41920.2950.0725No
49STK161426160_a_at42610.2910.0709No
50IL12A1425454_a_at42790.2900.0717No
51GRK11421361_at43960.2810.0678No
52TSSK31418557_s_at 1432397_at44490.2790.0669No
53FASTK1460635_at44530.2790.0683No
54PRKCZ1418085_at 1449692_at 1454902_at45360.2740.0659No
55HCLS11418842_at45530.2730.0667No
56CDKN2A1450140_a_at47280.2650.0601No
57EPHB21425015_at 1425016_at 1442471_at 1445417_at 1454022_at47290.2650.0615No
58MAP4K41422615_at 1440609_at 1448050_s_at 1459912_at48390.2590.0578No
59IL41449864_at49120.2570.0559No
60ERBB21424919_at49790.2530.0542No
61TRIB11424880_at 1424881_at50440.2510.0526No
62AURKC1449364_at52660.2410.0437No
63FES1427368_x_at 1452410_a_at52870.2400.0440No
64BARD11420594_at53590.2370.0420No
65PMVK1427893_a_at53960.2360.0416No
66CD811416330_at54930.2310.0385No
67IL31RA1445095_at 1451535_at55180.2300.0386No
68EIF2AK41421389_a_at 1443235_at55790.2280.0370No
69ROCK21423592_at 1451041_at56250.2260.0362No
70CCL21420380_at56370.2260.0369No
71MAST11432255_at 1449423_at56990.2230.0353No
72PGK21416784_at57140.2230.0358No
73MERTK1422869_at57210.2230.0367No
74BRSK21431826_a_at 1439329_a_at 1459639_at58400.2180.0324No
75TYK21417306_at61390.2070.0198No
76MAPKAPK21426648_at61620.2060.0199No
77MAPK121447823_x_at 1449283_a_at63510.2000.0123No
78BCKDK1443813_x_at 1460644_at63930.1980.0115No
79TESK21426546_at64510.1970.0099No
80TSSK41432045_at 1432101_a_at 1438486_at 1443810_at66120.1910.0035No
81IL31450566_at66330.1900.0036No
82STK111418644_a_at68770.182-0.0066No
83EREG1419431_at69150.181-0.0074No
84ALS2CR21433544_at 1442452_at69910.179-0.0099No
85BMP41422912_at69930.179-0.0090No
86ADAM101450104_at 1460083_at70170.178-0.0091No
87MKNK11417630_at 1417631_at 1454119_at71130.175-0.0125No
88PAK11420979_at 1420980_at 1450070_s_at 1459029_at71720.174-0.0143No
89ERN21450139_at71880.173-0.0140No
90SRPK11454042_a_at 1455107_at73670.168-0.0213No
91TNK11422721_at 1425634_a_at 1425635_at73740.167-0.0207No
92WNK41427196_at 1444133_at75570.162-0.0283No
93MAP3K31426686_s_at 1426687_at 1436522_at75830.161-0.0286No
94ACVRL11435825_at 1451604_a_at75920.161-0.0281No
95MAP3K21422250_at75960.161-0.0273No
96BRSK11439892_at76470.159-0.0288No
97BMPR1A1425491_at 1425492_at 1425493_at 1425494_s_at 1445413_at 1451729_at78230.154-0.0360No
98MAP3K131430137_at 1440749_at 1447699_at78620.153-0.0370No
99BTK1422755_at79140.151-0.0385No
100MAP3K91432981_at 1442218_at 1455684_at 1458922_at79560.150-0.0396No
101STK191417334_at79690.150-0.0394No
102ICK1448310_at 1454243_at 1455687_at83040.141-0.0540No
103WNK31443924_at83580.140-0.0557No
104INSR1421380_at 1450225_at84000.139-0.0569No
105EGF1418093_a_at84600.138-0.0589No
106UHMK11446120_at 1454260_at87340.131-0.0708No
107MKNK21418300_a_at 1449029_at87550.130-0.0710No
108MYLK1425504_at 1425505_at 1425506_at88980.127-0.0769No
109MAPK41435367_at91650.120-0.0885No
110NEK41427639_a_at 1449861_at91660.120-0.0879No
111CARD141450142_a_at91900.119-0.0883No
112KALRN1429796_at 1436066_at 1442341_at 1442554_s_at 1445900_at 1448023_at 1457690_at 1457899_at 1459065_at93130.116-0.0933No
113BMX1422084_at93940.114-0.0964No
114EPHA51420557_at 1437920_at 1444690_at95500.111-0.1029No
115IRAK31430704_at 1435040_at95850.110-0.1039No
116ABL11423999_at 1441291_at 1444134_at 1445153_at98600.103-0.1160No
117CCL111417789_at100240.099-0.1230No
118NF21421820_a_at 1427708_a_at 1450382_at 1451829_a_at100820.098-0.1251No
119TSSK21449489_at101070.097-0.1257No
120PSEN11420261_at 1421853_at 1425549_at 1450399_at101730.095-0.1282No
121INHA1422728_at102000.095-0.1289No
122ERN11421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at103670.091-0.1361No
123IPPK1438019_at104200.090-0.1380No
124EIF2AK31430371_x_at 1449278_at 1453505_a_at104660.089-0.1396No
125TSSK61418956_at105310.088-0.1421No
126UQCRC21428631_a_at 1435757_a_at106070.086-0.1451No
127MARK41439051_a_at 1456618_at106450.085-0.1463No
128SNF1LK1419766_at 1459601_at106870.084-0.1477No
129ABL21445483_at 1447127_at106980.084-0.1478No
130IL201421608_at107280.083-0.1486No
131MYOD11418420_at 1447675_x_at108230.081-0.1526No
132PRKG21421354_at 1435162_at 1435460_at111100.074-0.1654No
133IGFBP31423062_at 1458268_s_at111270.074-0.1657No
134PRKG11443663_at 1443811_at 1443812_x_at 1444232_at 1445807_at 1445998_at 1449876_at112120.072-0.1692No
135PRKD11422673_at112590.071-0.1709No
136CAMK11417604_at113760.069-0.1759No
137PRKCI1417410_s_at 1448695_at114470.067-0.1788No
138TAF11447417_at 1455513_at 1458744_at115300.064-0.1823No
139SRPK21417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at115730.063-0.1838No
140ERG1425370_a_at 1440244_at116760.061-0.1882No
141PTK61442923_at 1450271_at117310.059-0.1904No
142BMPR1B1422872_at 1437312_at 1443720_s_at117790.058-0.1923No
143DMPK1422989_a_at 1434944_at119750.053-0.2010No
144CD801427717_at 1432826_a_at 1440592_at 1451950_a_at 1454372_at 1457952_at121120.050-0.2070No
145MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at124460.042-0.2222No
146UQCRH1452133_at 1453229_s_at124940.041-0.2241No
147ROCK11423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at126370.038-0.2305No
148MAP3K101436373_at 1440500_at 1457456_at 1458651_at126650.037-0.2315No
149MAPK151441755_at127970.034-0.2374No
150STK38L1435877_at 1435878_at 1455183_at129720.030-0.2452No
151EGFR1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at131590.025-0.2537No
152ACVR1B1422098_at 1433725_at135560.014-0.2719No
153MOBKL1A1430564_at 1455184_at135710.013-0.2725No
154MAP4K31444406_at136840.010-0.2776No
155SGK31420918_at 1420919_at 1450036_at138530.006-0.2853No
156IHPK31443503_at138890.005-0.2869No
157INHBA1422053_at 1458291_at139370.004-0.2891No
158STK361434733_at 1453584_at139490.003-0.2896No
159ERC11421501_a_at 1424247_at 1441493_at 1444356_at 1451279_at140360.001-0.2935No
160CSNK1G21423370_a_at14329-0.008-0.3070No
161TDGF11450989_at14450-0.012-0.3125No
162MARK11419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at14733-0.021-0.3254No
163FRK1421362_a_at 1426569_a_at 1426570_a_at 1436413_at 1440948_at14742-0.021-0.3256No
164MAPK31427060_at14783-0.022-0.3274No
165PKN31434525_at14898-0.026-0.3325No
166TOLLIP1423047_at 1423048_a_at15065-0.032-0.3400No
167PXK1451253_at15263-0.039-0.3489No
168CDKN2B1449152_at15290-0.040-0.3498No
169CDKL11429664_at 1453231_at15325-0.042-0.3512No
170LIPE1422820_at15340-0.043-0.3516No
171DYRK1B1422254_a_at15455-0.047-0.3566No
172MYO3A1431983_at15492-0.048-0.3580No
173CBLC1422666_at 1431692_a_at15598-0.052-0.3626No
174LATS11427679_at 1460264_at15672-0.055-0.3657No
175RAF11416078_s_at 1425419_a_at15837-0.063-0.3729No
176EIF2AK11421900_at 1421901_at 1430696_at 1436006_at 1453902_at15905-0.066-0.3756No
177PLK41419838_s_at 1426580_at 1452115_a_at15985-0.070-0.3789No
178TGFBR11420893_a_at 1420894_at 1420895_at 1446946_at16054-0.073-0.3817No
179NEK61451043_at16056-0.073-0.3813No
180ERBB31434606_at 1452482_at16096-0.075-0.3827No
181NEK111441525_at 1445012_at16298-0.085-0.3915No
182CAMK2A1437125_at 1441734_at 1442707_at 1443876_at 1452453_a_at 1457311_at16595-0.105-0.4047No
183CDC2L11418841_s_at16602-0.105-0.4044No
184CDC42BPB1434652_at 1459167_at16755-0.116-0.4108No
185AKT31422078_at 1435260_at 1435879_at 1443222_at 1460307_at16777-0.117-0.4111No
186TAOK31435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at16820-0.120-0.4124No
187CD241416034_at 1437502_x_at 1448182_a_at16822-0.120-0.4118No
188RPS6KA51431050_at 1437625_at 1439004_at 1440343_at16864-0.123-0.4130No
189PKN21437295_at 1437296_at16897-0.126-0.4138No
190CTBP11415702_a_at16904-0.126-0.4134No
191MAPK61419168_at 1419169_at 1429963_at 1459146_at16941-0.129-0.4144No
192ILK1449942_a_at17124-0.144-0.4220No
193DAPK11426915_at 1427358_a_at 1445032_at17131-0.145-0.4215No
194LATS21419678_at 1419679_at 1425420_s_at 1426156_at 1437101_at 1439441_x_at17351-0.166-0.4308No
195PRKCD1422847_a_at 1442256_at17365-0.167-0.4305No
196DAPK31423446_at 1456496_at17381-0.169-0.4303No
197CCNT11419313_at 1456477_at17385-0.169-0.4295No
198BCL101418970_a_at 1418971_x_at 1418972_at 1443524_x_at17549-0.185-0.4360No
199PLK31434496_at17627-0.194-0.4385No
200PRKAA11437539_at17704-0.201-0.4410No
201MINK11449362_a_at17786-0.211-0.4436No
202PRKCH1422079_at 1434248_at17855-0.218-0.4455No
203CAMK2B1448676_at 1455869_at18040-0.244-0.4527No
204BRAF1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at18093-0.251-0.4538No
205IRAK21436507_at18179-0.264-0.4563No
206MAP3K81419208_at18259-0.276-0.4585No
207PKN11458674_at 1459231_at18267-0.277-0.4573No
208GLMN1418839_at18398-0.294-0.4617No
209HCK1446553_at 1449455_at18436-0.299-0.4618No
210TLK21416944_a_at 1431827_a_at 1454018_at 1457357_at18546-0.313-0.4652No
211TNKS1432630_at 1433778_at 1445358_at 1459910_at18659-0.330-0.4686No
212PRPF4B1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at18750-0.345-0.4709No
213PCTK11415956_a_at 1438314_at 1443296_at 1460169_a_at19038-0.403-0.4820Yes
214CAMKK21424474_a_at 1424475_at 1424476_at 1455401_at19054-0.407-0.4805Yes
215PICK11419384_at19083-0.413-0.4796Yes
216SRP721428876_at 1428877_at19089-0.414-0.4776Yes
217MAP3K111450669_at19151-0.429-0.4781Yes
218CDC42BPG1436197_at19160-0.431-0.4761Yes
219OXSR11426933_at19271-0.455-0.4788Yes
220MARK21415952_at 1415953_s_at 1435889_at 1444303_at19325-0.468-0.4787Yes
221ULK11416504_at 1448370_at19441-0.493-0.4814Yes
222CCND31415907_at 1437584_at 1444323_at 1446567_at 1447434_at 1457549_at19489-0.507-0.4808Yes
223LMTK21439871_at 1455018_at 1459531_at19490-0.507-0.4781Yes
224PRKX1424286_at 1424287_at 1451299_at19625-0.544-0.4814Yes
225PIK3R11425514_at 1425515_at 1438682_at 1444591_at 1451737_at19644-0.549-0.4792Yes
226CSNK1A11424827_a_at 1428537_at 1430529_at 1451497_at 1456216_at19715-0.569-0.4794Yes
227LCK1425396_a_at 1439145_at 1439146_s_at 1457917_at19798-0.593-0.4800Yes
228MAP3K121417115_at 1438908_at 1456565_s_at19888-0.618-0.4808Yes
229PIM11423006_at 1435458_at19899-0.622-0.4779Yes
230DYRK21428637_at 1436918_at 1456502_at 1457667_x_at19965-0.648-0.4775Yes
231CSNK1D1415825_s_at 1418889_a_at 1437690_x_at 1444378_at 1449932_at 1456727_a_at20071-0.686-0.4786Yes
232PINK11441937_s_at 1451148_at20105-0.699-0.4764Yes
233PNKP1416378_at20161-0.718-0.4751Yes
234RAD171448762_at20359-0.803-0.4799Yes
235CLCF11437270_a_at 1437271_at 1450262_at20436-0.841-0.4789Yes
236DYRK1A1426226_at 1428299_at 1451977_at20498-0.869-0.4770Yes
237ABI31446191_at 1452928_at20625-0.934-0.4778Yes
238CHUK1417091_at 1428210_s_at 1451383_a_at20646-0.945-0.4737Yes
239SNRK1425678_a_at 1448864_at20689-0.985-0.4703Yes
240TNK21448298_at20764-1.043-0.4682Yes
241ABI21433985_at 1436984_at 1444783_at 1458053_at 1460153_at20791-1.058-0.4637Yes
242CDKN2D1416253_at20821-1.081-0.4592Yes
243SOCS11440047_at 1450446_a_at20823-1.082-0.4535Yes
244PIM21417216_at20918-1.164-0.4515Yes
245ITGB21450678_at20924-1.167-0.4455Yes
246FYB1452117_a_at20961-1.211-0.4407Yes
247CSNK2A11419034_at 1419035_s_at 1419036_at 1419037_at 1419038_a_at 1453427_at21003-1.246-0.4359Yes
248IKBKE1417813_at21018-1.261-0.4298Yes
249STK381416252_at 1431303_at 1439938_at21035-1.285-0.4236Yes
250STK41421107_at 1434159_at 1436015_s_at21065-1.312-0.4179Yes
251TLK11439158_at 1444730_at 1455024_at 1456407_a_at 1460002_at21119-1.377-0.4130Yes
252HIPK31419191_at 1426819_at21205-1.503-0.4088Yes
253CAMK41421941_at 1426167_a_at 1439843_at 1442822_at 1452572_at21229-1.528-0.4017Yes
254FRAP11417592_at 1436267_a_at 1446185_at 1459625_at21257-1.565-0.3945Yes
255MAP4K21428297_at 1434833_at 1450244_a_at21264-1.570-0.3864Yes
256PRKACB1420610_at 1420611_at 1457197_at21289-1.608-0.3788Yes
257UQCRB1416337_at 1455997_a_at21322-1.651-0.3715Yes
258F2R1437308_s_at 1450852_s_at21349-1.696-0.3636Yes
259PRKD31420567_at 1428229_at 1428230_at 1444691_at21436-1.873-0.3575Yes
260STK17B1423452_at 1430165_at 1450997_at21484-1.984-0.3490Yes
261TXK1425785_a_at21497-2.030-0.3386Yes
262PDPK11415729_at 1416501_at 1459775_at 1459776_x_at21531-2.098-0.3289Yes
263IHPK21428373_at 1435319_at21544-2.129-0.3180Yes
264CDKN1B1419497_at 1434045_at21588-2.239-0.3080Yes
265ABI11423177_a_at 1423178_at 1450890_a_at21599-2.263-0.2963Yes
266PRKCB11423478_at 1438981_at 1443144_at 1459674_at 1460419_a_at21636-2.405-0.2851Yes
267PAK21434250_at 1454887_at21638-2.412-0.2722Yes
268CDC42BPA1435847_at 1436380_at 1438449_at 1442260_at 1446945_at21693-2.617-0.2606Yes
269CRKRS1425555_at 1425556_at 1438831_at 1440858_at 1443294_at 1455567_at 1455964_at21716-2.778-0.2467Yes
270GMFG1419193_a_at 1419194_s_at21717-2.780-0.2318Yes
271CSNK1E1417175_at 1417176_at 1435373_at21762-2.918-0.2182Yes
272PRKAG11417690_at 1433533_x_at 1457803_at21794-3.115-0.2029Yes
273TGFB11420653_at 1445360_at21809-3.227-0.1862Yes
274STAT11420915_at 1440481_at 1450033_a_at 1450034_at21816-3.247-0.1690Yes
275GSK3B1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at21817-3.254-0.1516Yes
276CCND21416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at21828-3.314-0.1342Yes
277IGF1R1426565_at 1437219_at 1443566_at 1445600_at 1445664_at 1446303_at21844-3.404-0.1167Yes
278CDKN2C1416868_at 1439164_at21847-3.418-0.0984Yes
279WNK11433676_at 1436746_at 1437888_at 1439970_at21868-3.592-0.0801Yes
280TEC1441524_at 1460204_at21901-4.227-0.0588Yes
281AURKA1424511_at 1440129_at21926-5.196-0.0321Yes
282PTK2B1434653_at 1442437_at 1442927_at21933-6.0500.0001Yes
Table: GSEA details [plain text format]



Fig 2: PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for PHOSPHORYLATION