Details for gene set MITOCHONDRIAL

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	MITOCHONDRIAL_PART
Enrichment Score (ES)	0.55631465
Normalized Enrichment Score (NES)	1.7616519
Nominal p-value	0.0
FDR q-value	0.082549274
FWER p-Value	0.49

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP5C1	1416058_s_at 1438809_at	29	4.740	0.0476	Yes
2	TIMM50	1441819_x_at 1455456_a_at	56	4.053	0.0882	Yes
3	MRPS22	1416595_at 1443032_at	71	3.733	0.1261	Yes
4	NFS1	1416373_at 1431431_a_at 1442017_at	103	3.414	0.1599	Yes
5	CYCS	1422484_at 1445484_at	164	3.037	0.1885	Yes
6	ATP5G1	1416020_a_at 1444874_at	227	2.644	0.2130	Yes
7	ABCB8	1422015_a_at 1423713_at 1460022_at	266	2.429	0.2363	Yes
8	NDUFS8	1423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at	337	2.196	0.2558	Yes
9	ATP5G2	1415980_at 1456128_at	502	1.824	0.2671	Yes
10	TIMM10	1417499_at	620	1.571	0.2779	Yes
11	MRPS10	1428153_at 1458999_at	648	1.520	0.2924	Yes
12	PITRM1	1426453_at 1456577_x_at	692	1.462	0.3055	Yes
13	NDUFS7	1424313_a_at 1451312_at	864	1.252	0.3106	Yes
14	MRPL12	1452048_at	876	1.241	0.3229	Yes
15	SDHD	1428235_at 1437489_x_at	1135	1.031	0.3217	Yes
16	NDUFS4	1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at	1166	1.014	0.3308	Yes
17	BCS1L	1451541_at	1183	1.005	0.3404	Yes
18	TOMM22	1429103_at 1434420_x_at	1228	0.977	0.3485	Yes
19	ABCB6	1422524_at	1233	0.975	0.3584	Yes
20	CS	1422577_at 1422578_at 1450667_a_at	1256	0.961	0.3673	Yes
21	VDAC1	1415998_at 1436992_x_at 1437192_x_at 1437452_x_at 1437947_x_at	1274	0.951	0.3763	Yes
22	ATP5E	1416567_s_at	1345	0.915	0.3825	Yes
23	DNAJA3	1420629_a_at 1432066_at 1449935_a_at	1384	0.893	0.3900	Yes
24	PHB	1435144_at 1442233_at 1448563_at	1432	0.872	0.3969	Yes
25	MRPL23	1416948_at	1467	0.853	0.4041	Yes
26	MRPL55	1429453_a_at	1488	0.844	0.4119	Yes
27	MRPS28	1452585_at	1492	0.844	0.4205	Yes
28	NDUFV1	1415966_a_at 1415967_at 1456015_x_at	1496	0.842	0.4290	Yes
29	MRPS15	1430100_at 1449294_at 1456109_a_at	1504	0.838	0.4374	Yes
30	VDAC3	1416175_a_at	1533	0.825	0.4446	Yes
31	ETFB	1428181_at	1611	0.788	0.4492	Yes
32	MRPS36	1423242_at	1670	0.757	0.4544	Yes
33	NDUFA9	1416663_at	1706	0.737	0.4604	Yes
34	TIMM9	1428010_at 1449886_a_at	1753	0.719	0.4657	Yes
35	MRPS35	1452111_at	1780	0.711	0.4718	Yes
36	MTX2	1430500_s_at	2061	0.617	0.4653	Yes
37	MRPS16	1448869_a_at	2099	0.607	0.4699	Yes
38	UQCRC1	1428782_a_at	2115	0.601	0.4754	Yes
39	SLC25A15	1420966_at 1420967_at	2173	0.585	0.4789	Yes
40	BAX	1416837_at	2180	0.583	0.4846	Yes
41	NDUFB6	1434056_a_at 1434057_at	2181	0.583	0.4906	Yes
42	SLC25A1	1428190_at	2183	0.583	0.4966	Yes
43	TIMM13	1455211_a_at	2188	0.582	0.5024	Yes
44	COX6B2	1435275_at	2237	0.571	0.5061	Yes
45	MRPS18C	1427901_at	2301	0.553	0.5089	Yes
46	ATP5O	1416278_a_at	2361	0.538	0.5118	Yes
47	ETFA	1423972_at	2367	0.537	0.5171	Yes
48	SUPV3L1	1432623_at 1460557_at	2396	0.531	0.5213	Yes
49	NDUFS1	1425143_a_at 1453354_at	2398	0.531	0.5267	Yes
50	ACN9	1456614_at	2531	0.503	0.5259	Yes
51	MRPL40	1448849_at	2546	0.499	0.5304	Yes
52	ATP5F1	1426742_at 1433562_s_at	2558	0.497	0.5350	Yes
53	ALDH4A1	1452375_at	2585	0.491	0.5389	Yes
54	TIMM23	1416485_at	2711	0.466	0.5379	Yes
55	GRPEL1	1417320_at	2720	0.465	0.5424	Yes
56	MRPS12	1448799_s_at	2836	0.445	0.5417	Yes
57	NDUFA6	1448427_at	2922	0.431	0.5423	Yes
58	SLC25A3	1416300_a_at 1440302_at	3105	0.401	0.5380	Yes
59	TIMM17A	1426256_at	3144	0.396	0.5404	Yes
60	MPV17	1420387_at	3155	0.394	0.5440	Yes
61	ATP5J	1416143_at	3166	0.393	0.5476	Yes
62	NDUFS2	1451096_at	3223	0.385	0.5490	Yes
63	MRPS21	1422451_at	3270	0.379	0.5508	Yes
64	VDAC2	1415990_at	3309	0.375	0.5529	Yes
65	ATP5B	1416829_at	3364	0.368	0.5542	Yes
66	POLG2	1450816_at	3486	0.353	0.5523	Yes
67	MRPS24	1438563_s_at 1450865_s_at	3582	0.343	0.5515	Yes
68	MSTO1	1424577_at	3622	0.339	0.5532	Yes
69	NDUFA2	1417368_s_at	3685	0.334	0.5538	Yes
70	FIS1	1416764_at 1443819_x_at	3708	0.332	0.5563	Yes
71	ATP5A1	1420037_at 1423111_at 1449710_s_at	3857	0.320	0.5528	Yes
72	NDUFS3	1423737_at	3907	0.316	0.5538	Yes
73	NDUFA1	1422241_a_at	3924	0.315	0.5563	Yes
74	ABCF2	1423863_at	4139	0.298	0.5496	No
75	TIMM8B	1431665_a_at	4571	0.272	0.5326	No
76	HSD3B2	1425127_at	4763	0.264	0.5266	No
77	MAOB	1434354_at	4853	0.259	0.5252	No
78	ATP5D	1423716_s_at 1456580_s_at	5080	0.249	0.5174	No
79	PHB2	1416202_at 1438938_x_at 1455713_x_at 1460035_at	5434	0.234	0.5036	No
80	BCKDHB	1427153_at	5851	0.218	0.4868	No
81	UCP3	1420657_at 1420658_at	5947	0.214	0.4846	No
82	MRPL10	1418112_at	5970	0.213	0.4858	No
83	MFN2	1441424_at 1448131_at 1451900_at	6100	0.209	0.4821	No
84	BCKDK	1443813_x_at 1460644_at	6393	0.198	0.4707	No
85	OXA1L	1423738_at 1451088_a_at 1456845_at	6784	0.185	0.4547	No
86	TIMM44	1417670_at 1439371_x_at 1448801_a_at	6917	0.181	0.4505	No
87	HSD3B1	1448453_at	6957	0.180	0.4506	No
88	MRPS11	1455233_at 1460195_at	7015	0.178	0.4498	No
89	ATP5G3	1454661_at	8034	0.148	0.4047	No
90	TIMM17B	1438656_x_at 1460685_at	8742	0.131	0.3736	No
91	CENTA2	1425638_at	9103	0.122	0.3583	No
92	NDUFA13	1430713_s_at	9251	0.118	0.3528	No
93	TFB2M	1423441_at	9395	0.114	0.3474	No
94	SURF1	1450561_a_at	10054	0.098	0.3183	No
95	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	10372	0.091	0.3047	No
96	BNIP3	1422470_at	11206	0.072	0.2672	No
97	SDHA	1426688_at 1426689_s_at 1445317_at	11345	0.069	0.2616	No
98	MRPL52	1415761_at 1415762_x_at 1455366_at 1460701_a_at	11626	0.062	0.2494	No
99	MRPL32	1424372_at	12025	0.051	0.2317	No
100	UQCRH	1452133_at 1453229_s_at	12494	0.041	0.2107	No
101	PMPCA	1424661_at 1424662_at	12595	0.039	0.2065	No
102	CASQ1	1422598_at	13871	0.005	0.1481	No
103	MRPL41	1428588_a_at 1428589_at 1428590_at	14523	-0.014	0.1183	No
104	SLC25A22	1452653_at	14844	-0.024	0.1039	No
105	RAF1	1416078_s_at 1425419_a_at	15837	-0.063	0.0591	No
106	GATM	1423569_at	16126	-0.077	0.0467	No
107	BCKDHA	1416647_at	16503	-0.099	0.0304	No
108	HTRA2	1436269_s_at 1460495_s_at	17142	-0.146	0.0027	No
109	HADHB	1437172_x_at	17328	-0.164	-0.0041	No
110	RAB11FIP5	1427405_s_at 1434314_s_at	17388	-0.169	-0.0051	No
111	COX15	1426693_x_at 1437982_x_at 1452146_a_at 1460376_a_at	17422	-0.173	-0.0048	No
112	ABCB7	1419931_at 1427490_at 1435006_s_at	17644	-0.197	-0.0129	No
113	IMMT	1429533_at 1429534_a_at 1433470_a_at 1437126_at	17847	-0.217	-0.0199	No
114	PPOX	1416618_at 1441862_at 1448065_at	18982	-0.392	-0.0679	No
115	TOMM34	1448345_at	19099	-0.415	-0.0689	No
116	OPA1	1418768_at 1434890_at 1449214_a_at	19377	-0.480	-0.0767	No
117	HCCS	1420889_at 1420890_at	19588	-0.534	-0.0808	No
118	NNT	1416105_at 1432608_at 1456573_x_at	20107	-0.700	-0.0973	No
119	RHOT2	1426822_at	20126	-0.705	-0.0909	No
120	NDUFAB1	1428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at	20293	-0.778	-0.0904	No
121	SLC25A11	1426586_at	20475	-0.859	-0.0899	No
122	DBT	1440016_at 1449118_at	20583	-0.909	-0.0854	No
123	CASP7	1426062_a_at 1448659_at	20638	-0.942	-0.0782	No
124	OGDH	1445632_at 1451274_at	20709	-1.001	-0.0710	No
125	MRPS18A	1416984_at 1457813_at	20777	-1.050	-0.0633	No
126	ALAS2	1451675_a_at	20784	-1.052	-0.0527	No
127	BCL2	1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at	20911	-1.157	-0.0465	No
128	ACADM	1415984_at	21024	-1.275	-0.0385	No
129	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	21081	-1.323	-0.0274	No
130	UQCRB	1416337_at 1455997_a_at	21322	-1.651	-0.0214	No
131	RHOT1	1423533_a_at 1440853_at	21504	-2.042	-0.0086	No
132	MRPL51	1416877_a_at 1416878_at 1416879_at	21708	-2.749	0.0105	No