Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
| Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | GOLGI_MEMBRANE |
| Enrichment Score (ES) | -0.6363483 |
| Normalized Enrichment Score (NES) | -1.6565576 |
| Nominal p-value | 0.008080808 |
| FDR q-value | 0.29997167 |
| FWER p-Value | 0.972 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | ATP2C1 | 1431196_at 1434386_at 1437738_at 1439215_at 1442742_at | 452 | 1.932 | 0.0684 | No | ||
| 2 | AP1S1 | 1416087_at | 2354 | 0.540 | 0.0065 | No | ||
| 3 | GOLGB1 | 1433135_at 1435032_at 1460535_at | 3496 | 0.351 | -0.0295 | No | ||
| 4 | MAN1C1 | 1436193_at | 3579 | 0.343 | -0.0174 | No | ||
| 5 | FIS1 | 1416764_at 1443819_x_at | 3708 | 0.332 | -0.0079 | No | ||
| 6 | LDLRAP1 | 1424378_at 1457162_at | 3846 | 0.321 | 0.0006 | No | ||
| 7 | CSPG5 | 1450713_at | 4696 | 0.266 | -0.0259 | No | ||
| 8 | BET1 | 1416866_at 1416867_at | 6691 | 0.188 | -0.1083 | No | ||
| 9 | DOPEY1 | 1435295_at 1442855_at | 7217 | 0.172 | -0.1243 | No | ||
| 10 | CLN3 | 1417551_at 1457789_at | 7810 | 0.154 | -0.1442 | No | ||
| 11 | BNIP3 | 1422470_at | 11206 | 0.072 | -0.2960 | No | ||
| 12 | TAPBP | 1421812_at 1450378_at | 11762 | 0.058 | -0.3186 | No | ||
| 13 | PAMCI | 1427942_at | 11868 | 0.056 | -0.3208 | No | ||
| 14 | GNAS | 1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at | 11887 | 0.055 | -0.3191 | No | ||
| 15 | COG2 | 1416932_at | 13286 | 0.021 | -0.3820 | No | ||
| 16 | CAV1 | 1449145_a_at | 13455 | 0.016 | -0.3889 | No | ||
| 17 | MALL | 1425359_at 1435693_at | 13670 | 0.011 | -0.3982 | No | ||
| 18 | PCSK7 | 1417180_at | 14739 | -0.021 | -0.4460 | No | ||
| 19 | RER1 | 1460660_x_at 1460706_s_at | 15629 | -0.053 | -0.4841 | No | ||
| 20 | AP1GBP1 | 1435215_at 1442344_at 1457695_at | 15764 | -0.059 | -0.4875 | No | ||
| 21 | AP1G2 | 1419113_at | 15913 | -0.066 | -0.4912 | No | ||
| 22 | LARGE | 1417435_at 1417436_at 1441642_at 1442420_at 1443212_at 1458663_at | 16365 | -0.089 | -0.5077 | No | ||
| 23 | TRIM23 | 1426969_at 1429998_at 1456089_at | 16463 | -0.096 | -0.5077 | No | ||
| 24 | DOPEY2 | 1428330_at 1449904_at | 17584 | -0.188 | -0.5502 | No | ||
| 25 | GOLGA3 | 1419159_at 1419160_at 1449616_s_at | 18688 | -0.334 | -0.5852 | No | ||
| 26 | LMAN1 | 1428129_at 1428130_at 1444037_at 1452671_s_at | 19810 | -0.598 | -0.6088 | Yes | ||
| 27 | RHOT2 | 1426822_at | 20126 | -0.705 | -0.5907 | Yes | ||
| 28 | VAMP4 | 1422895_at 1422896_at 1434796_at | 20260 | -0.767 | -0.5615 | Yes | ||
| 29 | COPB1 | 1423301_at | 20326 | -0.791 | -0.5280 | Yes | ||
| 30 | ARFIP1 | 1454916_s_at | 20374 | -0.809 | -0.4929 | Yes | ||
| 31 | GLG1 | 1417087_at 1448579_at 1448580_at 1460554_s_at | 20503 | -0.871 | -0.4586 | Yes | ||
| 32 | ATP7A | 1418774_a_at 1436921_at | 20523 | -0.881 | -0.4189 | Yes | ||
| 33 | MAP4K2 | 1428297_at 1434833_at 1450244_a_at | 21264 | -1.570 | -0.3803 | Yes | ||
| 34 | ENTPD4 | 1431761_at 1438177_x_at 1447900_x_at 1449190_a_at | 21293 | -1.612 | -0.3073 | Yes | ||
| 35 | RHOT1 | 1423533_a_at 1440853_at | 21504 | -2.042 | -0.2229 | Yes | ||
| 36 | ICA1 | 1417901_a_at 1431644_a_at | 21517 | -2.070 | -0.1281 | Yes | ||
| 37 | STEAP2 | 1428636_at 1438773_at 1442359_at 1444290_at 1446071_at | 21806 | -3.194 | 0.0059 | Yes |
