Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | SCID |
GeneSet | V$ZID_01 |
Enrichment Score (ES) | 0.45876774 |
Normalized Enrichment Score (NES) | 1.4575071 |
Nominal p-value | 0.007905139 |
FDR q-value | 0.14377515 |
FWER p-Value | 0.958 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | ATP2A2 | 1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at | 9 | 6.169 | 0.0764 | Yes | ||
2 | MBNL1 | 1416904_at 1439686_at 1440315_at 1445106_at 1457924_at | 61 | 3.921 | 0.1229 | Yes | ||
3 | GABARAPL2 | 1423187_at 1441376_at 1444956_at 1459477_at | 77 | 3.686 | 0.1682 | Yes | ||
4 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 251 | 2.504 | 0.1914 | Yes | ||
5 | TLN1 | 1436042_at 1448402_at 1457782_at | 270 | 2.416 | 0.2207 | Yes | ||
6 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 376 | 2.102 | 0.2420 | Yes | ||
7 | HIST1H3D | 1427863_at 1453573_at | 406 | 2.033 | 0.2660 | Yes | ||
8 | SUPT16H | 1419741_at 1449578_at 1456449_at | 449 | 1.937 | 0.2882 | Yes | ||
9 | MYH6 | 1417729_at 1448826_at 1458850_at | 460 | 1.906 | 0.3115 | Yes | ||
10 | SP4 | 1421504_at 1437508_at | 467 | 1.889 | 0.3348 | Yes | ||
11 | NFYA | 1422082_a_at 1427808_at 1452560_a_at | 518 | 1.784 | 0.3547 | Yes | ||
12 | RPS6KA4 | 1438243_at 1448498_at | 657 | 1.510 | 0.3672 | Yes | ||
13 | ANXA9 | 1431554_a_at | 811 | 1.325 | 0.3767 | Yes | ||
14 | TIAM1 | 1418057_at 1444373_at 1453887_a_at | 931 | 1.207 | 0.3862 | Yes | ||
15 | UTX | 1427235_at 1427672_a_at 1440524_at 1441201_at 1445198_at 1446234_at 1446278_at | 947 | 1.192 | 0.4004 | Yes | ||
16 | HMGB1 | 1416176_at 1425048_a_at 1435324_x_at | 997 | 1.148 | 0.4124 | Yes | ||
17 | BCS1L | 1451541_at | 1183 | 1.005 | 0.4165 | Yes | ||
18 | APEX2 | 1424322_at 1425954_a_at | 1246 | 0.966 | 0.4257 | Yes | ||
19 | SEMA6C | 1423454_a_at 1437652_at 1451898_a_at | 1248 | 0.965 | 0.4376 | Yes | ||
20 | RAB2 | 1418621_at 1418622_at 1418623_at 1419945_s_at 1419946_s_at 1436477_x_at 1449676_at | 1392 | 0.891 | 0.4422 | Yes | ||
21 | PA2G4 | 1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at | 1643 | 0.770 | 0.4403 | Yes | ||
22 | RB1CC1 | 1418968_at 1431605_at 1449292_at | 1798 | 0.704 | 0.4420 | Yes | ||
23 | SKIL | 1422054_a_at 1452214_at | 2020 | 0.629 | 0.4397 | Yes | ||
24 | ITPR3 | 1417297_at | 2034 | 0.625 | 0.4469 | Yes | ||
25 | MRPL49 | 1423218_a_at 1423219_a_at | 2037 | 0.624 | 0.4545 | Yes | ||
26 | DNAJB5 | 1421961_a_at 1421962_at 1450436_s_at | 2110 | 0.604 | 0.4588 | Yes | ||
27 | KRTCAP2 | 1417058_a_at 1417059_at | 2305 | 0.552 | 0.4567 | No | ||
28 | MRPL40 | 1448849_at | 2546 | 0.499 | 0.4519 | No | ||
29 | PCF11 | 1427159_at 1427160_at 1428724_at 1456489_at | 2876 | 0.438 | 0.4423 | No | ||
30 | NELL2 | 1423560_at 1423561_at | 3000 | 0.421 | 0.4419 | No | ||
31 | LRCH4 | 1424878_at 1424879_at 1451522_s_at 1454389_at 1454390_at | 3158 | 0.394 | 0.4396 | No | ||
32 | PLAG1 | 1421745_at 1443943_at | 3624 | 0.339 | 0.4224 | No | ||
33 | WNT6 | 1419708_at 1435980_x_at | 3634 | 0.338 | 0.4262 | No | ||
34 | DHX30 | 1416140_a_at 1438832_x_at 1438969_x_at 1453251_at | 3700 | 0.333 | 0.4274 | No | ||
35 | DDR2 | 1422738_at 1455688_at | 3796 | 0.325 | 0.4271 | No | ||
36 | ENPP1 | 1419276_at 1459546_s_at | 3899 | 0.317 | 0.4264 | No | ||
37 | AKAP1 | 1418279_a_at 1449019_at | 4020 | 0.307 | 0.4247 | No | ||
38 | MECP2 | 1438930_s_at 1449266_at 1460246_at | 4290 | 0.289 | 0.4159 | No | ||
39 | FASTK | 1460635_at | 4453 | 0.279 | 0.4120 | No | ||
40 | PSMD8 | 1423296_at | 4842 | 0.259 | 0.3974 | No | ||
41 | DDX5 | 1419653_a_at 1423645_a_at 1433809_at 1433810_x_at 1438371_x_at 1454793_x_at | 4890 | 0.258 | 0.3984 | No | ||
42 | SLC17A3 | 1418923_at | 4972 | 0.254 | 0.3979 | No | ||
43 | TLX3 | 1450806_at | 5295 | 0.240 | 0.3861 | No | ||
44 | ERF | 1422114_at 1435561_at | 5583 | 0.228 | 0.3757 | No | ||
45 | THPO | 1449569_at | 5823 | 0.219 | 0.3675 | No | ||
46 | FBXO24 | 1431864_at | 5971 | 0.213 | 0.3634 | No | ||
47 | SCRT2 | 1440930_a_at 1440931_at 1446986_at 1457310_x_at | 6109 | 0.208 | 0.3597 | No | ||
48 | ADAM12 | 1421171_at 1421172_at | 6541 | 0.193 | 0.3423 | No | ||
49 | PHOSPHO1 | 1452485_at | 6560 | 0.192 | 0.3439 | No | ||
50 | CNTN1 | 1449563_at 1452981_at | 6712 | 0.188 | 0.3393 | No | ||
51 | GGN | 1445278_at | 7182 | 0.173 | 0.3199 | No | ||
52 | HR | 1422110_at 1435950_at | 7231 | 0.172 | 0.3198 | No | ||
53 | NLGN3 | 1456384_at | 7259 | 0.171 | 0.3207 | No | ||
54 | TLX1 | 1450526_at | 7575 | 0.162 | 0.3083 | No | ||
55 | TRAPPC3 | 1416771_at | 7625 | 0.160 | 0.3080 | No | ||
56 | SPAG8 | 1435997_at | 7688 | 0.158 | 0.3071 | No | ||
57 | MYO10 | 1422544_at 1427363_at 1450650_at 1450651_at 1454731_at | 7757 | 0.156 | 0.3060 | No | ||
58 | NGFR | 1421241_at 1450177_at 1454903_at | 7891 | 0.152 | 0.3017 | No | ||
59 | BTK | 1422755_at | 7914 | 0.151 | 0.3026 | No | ||
60 | C1QTNF6 | 1431856_a_at | 7981 | 0.150 | 0.3014 | No | ||
61 | PAFAH1B1 | 1417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at | 8167 | 0.145 | 0.2948 | No | ||
62 | ESRRG | 1421747_at 1455267_at 1457896_at | 8458 | 0.138 | 0.2832 | No | ||
63 | DRG1 | 1434688_x_at 1447752_x_at 1448336_at | 8482 | 0.137 | 0.2838 | No | ||
64 | DDIT4L | 1439332_at 1444139_at 1451751_at | 8676 | 0.132 | 0.2766 | No | ||
65 | TNKS1BP1 | 1427051_at | 8922 | 0.126 | 0.2669 | No | ||
66 | HOXB8 | 1452493_s_at | 9030 | 0.123 | 0.2635 | No | ||
67 | SART3 | 1417547_at 1417548_at | 9172 | 0.120 | 0.2586 | No | ||
68 | HTR1B | 1422288_at | 10040 | 0.099 | 0.2200 | No | ||
69 | AMOTL1 | 1428785_at 1431121_at 1446909_at 1455247_at | 10236 | 0.094 | 0.2122 | No | ||
70 | SNX12 | 1421797_a_at 1454807_a_at 1455465_at 1459041_at | 10322 | 0.092 | 0.2095 | No | ||
71 | DCAMKL1 | 1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at | 10485 | 0.089 | 0.2031 | No | ||
72 | FKBP14 | 1433481_at 1458225_at | 10563 | 0.087 | 0.2007 | No | ||
73 | NT5C1B | 1427715_a_at | 10569 | 0.087 | 0.2015 | No | ||
74 | ISL1 | 1422720_at 1450723_at | 10578 | 0.087 | 0.2022 | No | ||
75 | ZIC1 | 1423477_at 1439627_at | 11004 | 0.076 | 0.1837 | No | ||
76 | ZIC4 | 1421539_at 1456417_at | 11247 | 0.071 | 0.1734 | No | ||
77 | MSI2 | 1421230_a_at 1421231_at 1435520_at 1435521_at 1436818_a_at 1441185_at 1441373_at 1443008_at 1443530_at 1446022_at 1458136_at 1458542_at | 11279 | 0.071 | 0.1729 | No | ||
78 | PPP2R2B | 1426621_a_at | 11361 | 0.069 | 0.1700 | No | ||
79 | LIN28 | 1437752_at | 11363 | 0.069 | 0.1709 | No | ||
80 | MAB21L1 | 1421369_a_at 1424679_at 1440860_at 1457290_at | 11425 | 0.067 | 0.1689 | No | ||
81 | PAPPA | 1427633_a_at 1432591_at 1432592_at 1459375_at | 11462 | 0.066 | 0.1681 | No | ||
82 | TMEFF1 | 1426649_at 1441890_x_at | 11599 | 0.063 | 0.1626 | No | ||
83 | PGF | 1418471_at | 11698 | 0.060 | 0.1589 | No | ||
84 | GCNT3 | 1424901_at 1430963_at | 11793 | 0.058 | 0.1553 | No | ||
85 | DACH1 | 1420694_a_at 1420695_at 1433743_at 1447174_at 1459381_at | 11813 | 0.057 | 0.1551 | No | ||
86 | PLA2G2F | 1421325_at 1434852_at | 11884 | 0.055 | 0.1526 | No | ||
87 | HOXB9 | 1452317_at | 11895 | 0.055 | 0.1528 | No | ||
88 | COMMD10 | 1428491_at 1456236_s_at | 12064 | 0.051 | 0.1457 | No | ||
89 | FGFR1 | 1424050_s_at 1425911_a_at 1436551_at | 12182 | 0.048 | 0.1409 | No | ||
90 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 12344 | 0.045 | 0.1341 | No | ||
91 | SERPINI1 | 1416702_at 1443756_at 1448443_at | 12440 | 0.042 | 0.1303 | No | ||
92 | MAP4K5 | 1427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at | 12446 | 0.042 | 0.1306 | No | ||
93 | CHRD | 1417304_at | 12621 | 0.038 | 0.1231 | No | ||
94 | SETBP1 | 1458575_at 1459493_at | 12634 | 0.038 | 0.1230 | No | ||
95 | MEOX1 | 1417595_at | 13169 | 0.024 | 0.0988 | No | ||
96 | CAPNS1 | 1426400_a_at | 13295 | 0.021 | 0.0933 | No | ||
97 | GRIK3 | 1427709_at | 13346 | 0.019 | 0.0912 | No | ||
98 | PRELP | 1416321_s_at 1416322_at | 13432 | 0.017 | 0.0875 | No | ||
99 | PSD | 1435780_at | 13449 | 0.017 | 0.0870 | No | ||
100 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 13468 | 0.016 | 0.0864 | No | ||
101 | PLP1 | 1425467_a_at 1425468_at 1451718_at | 13711 | 0.010 | 0.0754 | No | ||
102 | B4GALT2 | 1418080_at 1448941_at | 13819 | 0.007 | 0.0706 | No | ||
103 | PLXNA3 | 1420995_at 1420996_at | 13979 | 0.002 | 0.0633 | No | ||
104 | CHD2 | 1444246_at 1445843_at | 14051 | 0.000 | 0.0600 | No | ||
105 | CACNG2 | 1420596_at 1440210_at 1453363_at | 14231 | -0.005 | 0.0519 | No | ||
106 | CMYA1 | 1419220_at | 14414 | -0.011 | 0.0437 | No | ||
107 | UST | 1437293_x_at 1439218_at 1444275_at 1458897_at 1459970_at | 14496 | -0.014 | 0.0401 | No | ||
108 | TRIM46 | 1460568_at | 14578 | -0.016 | 0.0366 | No | ||
109 | STXBP6 | 1425749_at 1435396_at 1443580_at | 14634 | -0.018 | 0.0343 | No | ||
110 | PIPOX | 1449374_at | 14797 | -0.023 | 0.0271 | No | ||
111 | RIN2 | 1426368_at 1441209_at 1442829_at | 14985 | -0.029 | 0.0189 | No | ||
112 | POLG | 1423272_at 1423273_at 1437564_at | 15012 | -0.030 | 0.0181 | No | ||
113 | AP2M1 | 1442227_at 1442429_at 1443338_at 1450894_a_at 1457122_at | 15203 | -0.037 | 0.0098 | No | ||
114 | RBPSUH | 1418114_at 1438848_at 1446436_at 1448957_at 1454896_at | 15285 | -0.040 | 0.0066 | No | ||
115 | LTBP1 | 1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at | 15313 | -0.041 | 0.0059 | No | ||
116 | MTF1 | 1418333_at 1428979_at 1429170_a_at 1440414_at 1452990_at | 15499 | -0.049 | -0.0020 | No | ||
117 | FAU | 1417452_a_at | 15712 | -0.057 | -0.0110 | No | ||
118 | ACTN3 | 1418677_at | 15976 | -0.069 | -0.0222 | No | ||
119 | MPP3 | 1419077_at 1459611_at | 16046 | -0.073 | -0.0245 | No | ||
120 | ERBB3 | 1434606_at 1452482_at | 16096 | -0.075 | -0.0258 | No | ||
121 | KCNE1L | 1416640_at | 16672 | -0.110 | -0.0509 | No | ||
122 | HOXA3 | 1427433_s_at 1441070_at 1452421_at | 16836 | -0.121 | -0.0568 | No | ||
123 | NEURL | 1422251_at 1451872_a_at 1453527_a_at 1456854_at 1458561_at 1460343_at | 17191 | -0.151 | -0.0712 | No | ||
124 | LBX1 | 1422323_a_at 1427400_at | 17313 | -0.162 | -0.0747 | No | ||
125 | ADSS | 1460726_at | 17477 | -0.178 | -0.0800 | No | ||
126 | SDF2 | 1416857_at | 17551 | -0.185 | -0.0811 | No | ||
127 | JMJD1C | 1426900_at 1439998_at 1441592_at 1448049_at 1458521_at | 17667 | -0.198 | -0.0839 | No | ||
128 | MRPL24 | 1428709_a_at | 17789 | -0.211 | -0.0868 | No | ||
129 | BAHD1 | 1433703_s_at | 18119 | -0.256 | -0.0987 | No | ||
130 | CHD4 | 1436343_at 1438476_a_at 1451295_a_at | 18186 | -0.264 | -0.0985 | No | ||
131 | TCF8 | 1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at | 18318 | -0.283 | -0.1009 | No | ||
132 | CDC25A | 1417131_at 1417132_at 1445995_at | 18425 | -0.297 | -0.1021 | No | ||
133 | CDK5R1 | 1421123_at 1421124_at 1433450_at 1433451_at | 18462 | -0.301 | -0.1000 | No | ||
134 | DFNB31 | 1432555_at 1436485_s_at 1436486_x_at 1442507_at 1447438_at | 18498 | -0.306 | -0.0978 | No | ||
135 | DPF3 | 1441659_at 1442686_at 1450162_at | 18664 | -0.331 | -0.1013 | No | ||
136 | HNRPUL1 | 1451984_at | 18773 | -0.350 | -0.1018 | No | ||
137 | BCAR3 | 1415936_at 1431564_at | 18956 | -0.386 | -0.1054 | No | ||
138 | ABTB2 | 1433453_a_at 1433454_at 1443497_at 1444771_at | 18957 | -0.386 | -0.1006 | No | ||
139 | PHTF1 | 1449148_a_at | 18990 | -0.393 | -0.0972 | No | ||
140 | SLC35A1 | 1417538_at 1417539_at | 19048 | -0.406 | -0.0947 | No | ||
141 | MARCKS | 1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at | 19202 | -0.439 | -0.0963 | No | ||
142 | PKIB | 1421137_a_at 1421138_a_at | 19296 | -0.462 | -0.0948 | No | ||
143 | CREB3 | 1419979_s_at 1424740_at 1424741_s_at | 19307 | -0.465 | -0.0895 | No | ||
144 | ELK3 | 1417662_at 1442986_at 1445886_at 1448797_at | 19314 | -0.466 | -0.0839 | No | ||
145 | CTCF | 1418330_at 1449042_at | 19751 | -0.580 | -0.0967 | No | ||
146 | GFI1 | 1417679_at | 19821 | -0.601 | -0.0924 | No | ||
147 | TCF4 | 1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at | 19931 | -0.634 | -0.0895 | No | ||
148 | UBE2N | 1422559_at 1435384_at | 19955 | -0.642 | -0.0826 | No | ||
149 | SUPT6H | 1417628_at 1430458_at | 20101 | -0.698 | -0.0805 | No | ||
150 | ZBTB33 | 1421094_at 1434022_at | 20190 | -0.732 | -0.0754 | No | ||
151 | EVA1 | 1416236_a_at 1416237_at 1448265_x_at | 20218 | -0.740 | -0.0675 | No | ||
152 | KPNA4 | 1417974_at 1417975_at 1442928_at | 20497 | -0.869 | -0.0694 | No | ||
153 | FOXP1 | 1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at | 21031 | -1.284 | -0.0779 | No | ||
154 | ODF2 | 1426040_a_at 1435216_a_at 1439918_at 1444101_at 1454735_at | 21240 | -1.543 | -0.0682 | No | ||
155 | PHF8 | 1439132_at 1459392_at 1460398_at | 21550 | -2.155 | -0.0556 | No | ||
156 | SESN3 | 1449303_at 1453313_at | 21684 | -2.588 | -0.0294 | No | ||
157 | PDCD10 | 1437530_at 1448527_at 1448528_at | 21820 | -3.287 | 0.0053 | No |