DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classSCID
GeneSetV$ZID_01
Enrichment Score (ES)0.45876774
Normalized Enrichment Score (NES)1.4575071
Nominal p-value0.007905139
FDR q-value0.14377515
FWER p-Value0.958
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$ZID_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ATP2A21416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at96.1690.0764Yes
2MBNL11416904_at 1439686_at 1440315_at 1445106_at 1457924_at613.9210.1229Yes
3GABARAPL21423187_at 1441376_at 1444956_at 1459477_at773.6860.1682Yes
4HIRA1436241_s_at 1450049_a_at 1450050_at 1459103_at2512.5040.1914Yes
5TLN11436042_at 1448402_at 1457782_at2702.4160.2207Yes
6DMD1417307_at 1430320_at 1446156_at 1448665_at 1457022_at3762.1020.2420Yes
7HIST1H3D1427863_at 1453573_at4062.0330.2660Yes
8SUPT16H1419741_at 1449578_at 1456449_at4491.9370.2882Yes
9MYH61417729_at 1448826_at 1458850_at4601.9060.3115Yes
10SP41421504_at 1437508_at4671.8890.3348Yes
11NFYA1422082_a_at 1427808_at 1452560_a_at5181.7840.3547Yes
12RPS6KA41438243_at 1448498_at6571.5100.3672Yes
13ANXA91431554_a_at8111.3250.3767Yes
14TIAM11418057_at 1444373_at 1453887_a_at9311.2070.3862Yes
15UTX1427235_at 1427672_a_at 1440524_at 1441201_at 1445198_at 1446234_at 1446278_at9471.1920.4004Yes
16HMGB11416176_at 1425048_a_at 1435324_x_at9971.1480.4124Yes
17BCS1L1451541_at11831.0050.4165Yes
18APEX21424322_at 1425954_a_at12460.9660.4257Yes
19SEMA6C1423454_a_at 1437652_at 1451898_a_at12480.9650.4376Yes
20RAB21418621_at 1418622_at 1418623_at 1419945_s_at 1419946_s_at 1436477_x_at 1449676_at13920.8910.4422Yes
21PA2G41420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at16430.7700.4403Yes
22RB1CC11418968_at 1431605_at 1449292_at17980.7040.4420Yes
23SKIL1422054_a_at 1452214_at20200.6290.4397Yes
24ITPR31417297_at20340.6250.4469Yes
25MRPL491423218_a_at 1423219_a_at20370.6240.4545Yes
26DNAJB51421961_a_at 1421962_at 1450436_s_at21100.6040.4588Yes
27KRTCAP21417058_a_at 1417059_at23050.5520.4567No
28MRPL401448849_at25460.4990.4519No
29PCF111427159_at 1427160_at 1428724_at 1456489_at28760.4380.4423No
30NELL21423560_at 1423561_at30000.4210.4419No
31LRCH41424878_at 1424879_at 1451522_s_at 1454389_at 1454390_at31580.3940.4396No
32PLAG11421745_at 1443943_at36240.3390.4224No
33WNT61419708_at 1435980_x_at36340.3380.4262No
34DHX301416140_a_at 1438832_x_at 1438969_x_at 1453251_at37000.3330.4274No
35DDR21422738_at 1455688_at37960.3250.4271No
36ENPP11419276_at 1459546_s_at38990.3170.4264No
37AKAP11418279_a_at 1449019_at40200.3070.4247No
38MECP21438930_s_at 1449266_at 1460246_at42900.2890.4159No
39FASTK1460635_at44530.2790.4120No
40PSMD81423296_at48420.2590.3974No
41DDX51419653_a_at 1423645_a_at 1433809_at 1433810_x_at 1438371_x_at 1454793_x_at48900.2580.3984No
42SLC17A31418923_at49720.2540.3979No
43TLX31450806_at52950.2400.3861No
44ERF1422114_at 1435561_at55830.2280.3757No
45THPO1449569_at58230.2190.3675No
46FBXO241431864_at59710.2130.3634No
47SCRT21440930_a_at 1440931_at 1446986_at 1457310_x_at61090.2080.3597No
48ADAM121421171_at 1421172_at65410.1930.3423No
49PHOSPHO11452485_at65600.1920.3439No
50CNTN11449563_at 1452981_at67120.1880.3393No
51GGN1445278_at71820.1730.3199No
52HR1422110_at 1435950_at72310.1720.3198No
53NLGN31456384_at72590.1710.3207No
54TLX11450526_at75750.1620.3083No
55TRAPPC31416771_at76250.1600.3080No
56SPAG81435997_at76880.1580.3071No
57MYO101422544_at 1427363_at 1450650_at 1450651_at 1454731_at77570.1560.3060No
58NGFR1421241_at 1450177_at 1454903_at78910.1520.3017No
59BTK1422755_at79140.1510.3026No
60C1QTNF61431856_a_at79810.1500.3014No
61PAFAH1B11417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at81670.1450.2948No
62ESRRG1421747_at 1455267_at 1457896_at84580.1380.2832No
63DRG11434688_x_at 1447752_x_at 1448336_at84820.1370.2838No
64DDIT4L1439332_at 1444139_at 1451751_at86760.1320.2766No
65TNKS1BP11427051_at89220.1260.2669No
66HOXB81452493_s_at90300.1230.2635No
67SART31417547_at 1417548_at91720.1200.2586No
68HTR1B1422288_at100400.0990.2200No
69AMOTL11428785_at 1431121_at 1446909_at 1455247_at102360.0940.2122No
70SNX121421797_a_at 1454807_a_at 1455465_at 1459041_at103220.0920.2095No
71DCAMKL11423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at104850.0890.2031No
72FKBP141433481_at 1458225_at105630.0870.2007No
73NT5C1B1427715_a_at105690.0870.2015No
74ISL11422720_at 1450723_at105780.0870.2022No
75ZIC11423477_at 1439627_at110040.0760.1837No
76ZIC41421539_at 1456417_at112470.0710.1734No
77MSI21421230_a_at 1421231_at 1435520_at 1435521_at 1436818_a_at 1441185_at 1441373_at 1443008_at 1443530_at 1446022_at 1458136_at 1458542_at112790.0710.1729No
78PPP2R2B1426621_a_at113610.0690.1700No
79LIN281437752_at113630.0690.1709No
80MAB21L11421369_a_at 1424679_at 1440860_at 1457290_at114250.0670.1689No
81PAPPA1427633_a_at 1432591_at 1432592_at 1459375_at114620.0660.1681No
82TMEFF11426649_at 1441890_x_at115990.0630.1626No
83PGF1418471_at116980.0600.1589No
84GCNT31424901_at 1430963_at117930.0580.1553No
85DACH11420694_a_at 1420695_at 1433743_at 1447174_at 1459381_at118130.0570.1551No
86PLA2G2F1421325_at 1434852_at118840.0550.1526No
87HOXB91452317_at118950.0550.1528No
88COMMD101428491_at 1456236_s_at120640.0510.1457No
89FGFR11424050_s_at 1425911_a_at 1436551_at121820.0480.1409No
90PAX61419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at123440.0450.1341No
91SERPINI11416702_at 1443756_at 1448443_at124400.0420.1303No
92MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at124460.0420.1306No
93CHRD1417304_at126210.0380.1231No
94SETBP11458575_at 1459493_at126340.0380.1230No
95MEOX11417595_at131690.0240.0988No
96CAPNS11426400_a_at132950.0210.0933No
97GRIK31427709_at133460.0190.0912No
98PRELP1416321_s_at 1416322_at134320.0170.0875No
99PSD1435780_at134490.0170.0870No
100CSPG21421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at134680.0160.0864No
101PLP11425467_a_at 1425468_at 1451718_at137110.0100.0754No
102B4GALT21418080_at 1448941_at138190.0070.0706No
103PLXNA31420995_at 1420996_at139790.0020.0633No
104CHD21444246_at 1445843_at140510.0000.0600No
105CACNG21420596_at 1440210_at 1453363_at14231-0.0050.0519No
106CMYA11419220_at14414-0.0110.0437No
107UST1437293_x_at 1439218_at 1444275_at 1458897_at 1459970_at14496-0.0140.0401No
108TRIM461460568_at14578-0.0160.0366No
109STXBP61425749_at 1435396_at 1443580_at14634-0.0180.0343No
110PIPOX1449374_at14797-0.0230.0271No
111RIN21426368_at 1441209_at 1442829_at14985-0.0290.0189No
112POLG1423272_at 1423273_at 1437564_at15012-0.0300.0181No
113AP2M11442227_at 1442429_at 1443338_at 1450894_a_at 1457122_at15203-0.0370.0098No
114RBPSUH1418114_at 1438848_at 1446436_at 1448957_at 1454896_at15285-0.0400.0066No
115LTBP11419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at15313-0.0410.0059No
116MTF11418333_at 1428979_at 1429170_a_at 1440414_at 1452990_at15499-0.049-0.0020No
117FAU1417452_a_at15712-0.057-0.0110No
118ACTN31418677_at15976-0.069-0.0222No
119MPP31419077_at 1459611_at16046-0.073-0.0245No
120ERBB31434606_at 1452482_at16096-0.075-0.0258No
121KCNE1L1416640_at16672-0.110-0.0509No
122HOXA31427433_s_at 1441070_at 1452421_at16836-0.121-0.0568No
123NEURL1422251_at 1451872_a_at 1453527_a_at 1456854_at 1458561_at 1460343_at17191-0.151-0.0712No
124LBX11422323_a_at 1427400_at17313-0.162-0.0747No
125ADSS1460726_at17477-0.178-0.0800No
126SDF21416857_at17551-0.185-0.0811No
127JMJD1C1426900_at 1439998_at 1441592_at 1448049_at 1458521_at17667-0.198-0.0839No
128MRPL241428709_a_at17789-0.211-0.0868No
129BAHD11433703_s_at18119-0.256-0.0987No
130CHD41436343_at 1438476_a_at 1451295_a_at18186-0.264-0.0985No
131TCF81418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at18318-0.283-0.1009No
132CDC25A1417131_at 1417132_at 1445995_at18425-0.297-0.1021No
133CDK5R11421123_at 1421124_at 1433450_at 1433451_at18462-0.301-0.1000No
134DFNB311432555_at 1436485_s_at 1436486_x_at 1442507_at 1447438_at18498-0.306-0.0978No
135DPF31441659_at 1442686_at 1450162_at18664-0.331-0.1013No
136HNRPUL11451984_at18773-0.350-0.1018No
137BCAR31415936_at 1431564_at18956-0.386-0.1054No
138ABTB21433453_a_at 1433454_at 1443497_at 1444771_at18957-0.386-0.1006No
139PHTF11449148_a_at18990-0.393-0.0972No
140SLC35A11417538_at 1417539_at19048-0.406-0.0947No
141MARCKS1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at19202-0.439-0.0963No
142PKIB1421137_a_at 1421138_a_at19296-0.462-0.0948No
143CREB31419979_s_at 1424740_at 1424741_s_at19307-0.465-0.0895No
144ELK31417662_at 1442986_at 1445886_at 1448797_at19314-0.466-0.0839No
145CTCF1418330_at 1449042_at19751-0.580-0.0967No
146GFI11417679_at19821-0.601-0.0924No
147TCF41416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at19931-0.634-0.0895No
148UBE2N1422559_at 1435384_at19955-0.642-0.0826No
149SUPT6H1417628_at 1430458_at20101-0.698-0.0805No
150ZBTB331421094_at 1434022_at20190-0.732-0.0754No
151EVA11416236_a_at 1416237_at 1448265_x_at20218-0.740-0.0675No
152KPNA41417974_at 1417975_at 1442928_at20497-0.869-0.0694No
153FOXP11421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at21031-1.284-0.0779No
154ODF21426040_a_at 1435216_a_at 1439918_at 1444101_at 1454735_at21240-1.543-0.0682No
155PHF81439132_at 1459392_at 1460398_at21550-2.155-0.0556No
156SESN31449303_at 1453313_at21684-2.588-0.0294No
157PDCD101437530_at 1448527_at 1448528_at21820-3.2870.0053No
Table: GSEA details [plain text format]



Fig 2: V$ZID_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$ZID_01: Random ES distribution   
Gene set null distribution of ES for V$ZID_01