Details for gene set V$TBP

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$TBP_01
Enrichment Score (ES)	-0.44870764
Normalized Enrichment Score (NES)	-1.4645852
Nominal p-value	0.0020325202
FDR q-value	0.18865931
FWER p-Value	0.956

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	315	2.251	0.0120	No
2	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	376	2.102	0.0340	No
3	CLCN1	1427591_at 1448082_at	466	1.891	0.0522	No
4	KCTD15	1435339_at	520	1.779	0.0707	No
5	PRKAA2	1429463_at 1429464_at	537	1.746	0.0905	No
6	HDAC9	1421306_a_at 1434572_at	800	1.333	0.0941	No
7	SYTL2	1421594_a_at 1456593_at	809	1.326	0.1094	No
8	HIST2H2BE	1447854_s_at 1455095_at	861	1.257	0.1218	No
9	COL1A2	1446326_at 1450857_a_at	1635	0.774	0.0954	No
10	LUC7L	1428255_at 1431181_a_at 1431664_at 1452708_a_at	1799	0.704	0.0962	No
11	KPNA3	1421828_at 1445527_at 1446538_at 1450385_at 1450386_at	1831	0.695	0.1030	No
12	LGI1	1423183_at 1435851_at	2113	0.603	0.0971	No
13	RPS19	1449243_a_at 1460442_at	2419	0.526	0.0893	No
14	CUL3	1422794_at 1422795_at 1434717_at 1434718_at 1450756_s_at	2425	0.525	0.0953	No
15	USP47	1426976_at 1426977_at 1457454_at	2474	0.513	0.0991	No
16	NR0B1	1417760_at	2574	0.492	0.1003	No
17	PLEC1	1419835_s_at 1434610_at 1437554_at	2674	0.474	0.1014	No
18	COL10A1	1422253_at	2714	0.466	0.1050	No
19	MAP2K5	1417854_at 1430180_at 1453712_a_at 1455941_s_at	2716	0.466	0.1105	No
20	FHL2	1419184_a_at	2910	0.432	0.1067	No
21	FGF21	1422916_at	3058	0.408	0.1047	No
22	USH3A	1438347_at	3119	0.399	0.1067	No
23	CHRDL1	1421295_at 1424945_at 1434201_at 1456722_at	3141	0.396	0.1104	No
24	ABR	1433477_at	3290	0.377	0.1080	No
25	ASB4	1423422_at 1433919_at	3429	0.360	0.1059	No
26	HOXB4	1451761_at 1460379_at	3452	0.358	0.1091	No
27	S100A4	1424542_at	4206	0.295	0.0780	No
28	ASB18	1426116_at	4335	0.286	0.0754	No
29	TEF	1424175_at 1438033_at 1450184_s_at	4341	0.286	0.0786	No
30	SH3GLB2	1426499_at	4742	0.264	0.0633	No
31	ZFP95	1424892_at 1430562_at	4922	0.256	0.0581	No
32	MYH8	1426650_at	5060	0.250	0.0547	No
33	HSPB3	1449872_at	5140	0.247	0.0540	No
34	SLC3A1	1448741_at	5192	0.244	0.0545	No
35	HOXC4	1422870_at	5486	0.232	0.0438	No
36	NDST4	1421318_at 1431452_at 1450195_at	5536	0.230	0.0443	No
37	CYP26B1	1460011_at	5627	0.226	0.0428	No
38	FXYD1	1421374_a_at	5848	0.218	0.0352	No
39	GPR23	1434186_at 1439665_at 1452424_at	5962	0.213	0.0326	No
40	SLC35F5	1452059_at	5982	0.212	0.0342	No
41	AGT	1423396_at	5998	0.212	0.0360	No
42	P2RX5	1449433_at	6154	0.207	0.0313	No
43	ASB16	1452023_at	6307	0.201	0.0267	No
44	NOG	1422300_at	6324	0.201	0.0283	No
45	GIT1	1454759_at	6339	0.200	0.0300	No
46	PNMA1	1429224_at	6398	0.198	0.0297	No
47	MGAT3	1422145_at 1428801_at 1428802_at	6435	0.197	0.0303	No
48	GRIK4	1437681_at	6544	0.193	0.0277	No
49	THBS2	1422571_at 1447862_x_at 1450663_at	6574	0.192	0.0286	No
50	SOX9	1424950_at 1433889_at 1451538_at	6575	0.192	0.0308	No
51	SEMA4B	1427586_at 1455678_at	6625	0.190	0.0308	No
52	RAB5B	1422119_at 1437446_at	7029	0.178	0.0144	No
53	CLDN23	1424409_at	7309	0.169	0.0036	No
54	DES	1426731_at	7372	0.167	0.0027	No
55	DIRAS1	1425748_at 1451820_at 1455526_at	7389	0.167	0.0039	No
56	PPP1R3A	1422108_at	7400	0.167	0.0054	No
57	FGF5	1426186_a_at 1438883_at	7617	0.160	-0.0026	No
58	ACTA1	1427735_a_at	7667	0.158	-0.0030	No
59	TSC1	1422043_at 1439989_at 1455252_at	7907	0.151	-0.0122	No
60	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	7952	0.150	-0.0125	No
61	HOXC5	1439885_at 1450832_at 1456301_at	8104	0.146	-0.0177	No
62	BRUNOL4	1426929_at 1426930_at 1452240_at 1458475_at	8154	0.145	-0.0182	No
63	TNFRSF17	1420782_at	8349	0.140	-0.0255	No
64	ESRRG	1421747_at 1455267_at 1457896_at	8458	0.138	-0.0288	No
65	SCHIP1	1423025_a_at 1437700_at 1446421_at 1458588_at	8587	0.135	-0.0331	No
66	COL13A1	1422866_at	8805	0.129	-0.0416	No
67	PANK1	1418715_at 1429813_at 1429814_at 1431028_a_at 1457110_at	8988	0.124	-0.0485	No
68	GSC	1421412_at	9068	0.122	-0.0507	No
69	LHX5	1420348_at	9221	0.119	-0.0563	No
70	MYOCD	1425808_a_at 1425978_at	9321	0.116	-0.0595	No
71	DKK4	1425447_at	9696	0.107	-0.0754	No
72	HOXA10	1431475_a_at 1446408_at	9730	0.106	-0.0757	No
73	ITGA7	1418393_a_at	9832	0.103	-0.0791	No
74	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	9955	0.101	-0.0835	No
75	LRRTM3	1434759_at 1434760_at 1434761_at 1440112_at 1444477_at	10151	0.096	-0.0913	No
76	ART5	1427759_a_at 1451553_at	10189	0.095	-0.0919	No
77	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	10211	0.095	-0.0918	No
78	HOXC6	1427361_at 1427362_x_at 1427454_at	10271	0.093	-0.0934	No
79	RILP	1457696_at	10610	0.086	-0.1079	No
80	MYST2	1433433_at 1440746_at 1447631_at	10665	0.085	-0.1094	No
81	STAC	1418957_at 1445344_at	10667	0.085	-0.1084	No
82	BICD1	1427530_at 1437548_at 1438701_at 1451684_a_at	10779	0.082	-0.1126	No
83	CPA4	1453770_at	10868	0.080	-0.1157	No
84	CTNNAL1	1420929_at 1420930_s_at	10979	0.077	-0.1198	No
85	RASGRP3	1438030_at 1438031_at	11021	0.076	-0.1208	No
86	TCF1	1421234_at	11085	0.074	-0.1228	No
87	ZCCHC5	1437355_at	11281	0.071	-0.1310	No
88	RIT1	1420540_a_at 1428710_at	11327	0.070	-0.1322	No
89	HRC	1419109_at	11393	0.068	-0.1344	No
90	EN1	1418618_at	11452	0.067	-0.1363	No
91	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	11524	0.065	-0.1388	No
92	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	11555	0.064	-0.1394	No
93	PTF1A	1419424_at	11572	0.063	-0.1394	No
94	POFUT1	1443881_at 1450137_at 1456323_at	11580	0.063	-0.1390	No
95	ASB5	1449356_at	11715	0.060	-0.1444	No
96	GPR153	1426973_at	11831	0.057	-0.1491	No
97	DMPK	1422989_a_at 1434944_at	11975	0.053	-0.1550	No
98	HAND2	1422221_at 1436041_at 1443854_at 1446812_at	12388	0.044	-0.1734	No
99	GPSN2	1416352_s_at 1429681_a_at	12509	0.041	-0.1785	No
100	DNAJA4	1418591_at 1418592_at 1434196_at	12644	0.037	-0.1842	No
101	EHD1	1416010_a_at 1416011_x_at 1416012_at 1448175_at	12731	0.036	-0.1877	No
102	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	12754	0.035	-0.1883	No
103	NR0B2	1449854_at	12836	0.033	-0.1917	No
104	FZD8	1423348_at 1445815_at	12840	0.033	-0.1914	No
105	ART3	1441752_at 1452474_a_at	13011	0.029	-0.1989	No
106	HOXB5	1418415_at	13022	0.029	-0.1990	No
107	NME5	1422727_at	13211	0.024	-0.2074	No
108	BNC2	1438861_at 1440593_at 1459132_at	13352	0.019	-0.2136	No
109	MSC	1418417_at	13422	0.017	-0.2165	No
110	GCG	1425952_a_at	13554	0.014	-0.2224	No
111	POU4F1	1429667_at 1429668_at	13781	0.008	-0.2327	No
112	PAK6	1445475_at 1455200_at	13879	0.005	-0.2371	No
113	TNRC4	1452851_at	14082	-0.000	-0.2464	No
114	HAPLN1	1421633_a_at 1426294_at 1426295_at 1438020_at 1445735_at 1458109_at	14162	-0.003	-0.2500	No
115	ANGPT4	1438364_x_at 1440832_at 1450325_at	14262	-0.006	-0.2545	No
116	ABCC6	1421212_at	14313	-0.007	-0.2567	No
117	CDH20	1450312_at	14326	-0.008	-0.2571	No
118	RHOBTB1	1429206_at 1429656_at	14489	-0.013	-0.2644	No
119	IFNB1	1422305_at	14608	-0.017	-0.2696	No
120	GRIN2B	1422223_at 1431700_at	14738	-0.021	-0.2753	No
121	NANOS1	1436648_at 1455877_a_at	14872	-0.025	-0.2811	No
122	MEOX2	1424233_at 1424234_s_at	15069	-0.032	-0.2898	No
123	TRPM4	1435549_at	15217	-0.038	-0.2961	No
124	NTF3	1434802_s_at 1450803_at	15236	-0.038	-0.2965	No
125	CRISP1	1416325_at	15321	-0.042	-0.2998	No
126	PACSIN3	1416995_at 1431534_at 1437834_s_at 1456191_x_at	15417	-0.045	-0.3037	No
127	CFL2	1418066_at 1418067_at 1431432_at	15544	-0.050	-0.3089	No
128	GABRB2	1450319_at	15557	-0.051	-0.3088	No
129	SLC2A4	1415958_at 1415959_at	15816	-0.062	-0.3199	No
130	TUBA4	1417373_a_at 1417374_at 1417375_at	16036	-0.072	-0.3292	No
131	ANKRD23	1428183_at	16187	-0.079	-0.3351	No
132	EPHA7	1427528_a_at 1443485_at 1445635_at 1451991_at 1452380_at	16571	-0.103	-0.3515	No
133	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	16728	-0.114	-0.3573	No
134	PAX3	1420389_at 1430335_a_at 1441743_at 1459148_at	16980	-0.132	-0.3673	No
135	SLC30A1	1422786_at 1436164_at	17183	-0.150	-0.3748	No
136	SSH3	1447929_at	17308	-0.162	-0.3786	No
137	LBX1	1422323_a_at 1427400_at	17313	-0.162	-0.3769	No
138	B3GALT6	1421155_at 1435252_at 1440340_at	17349	-0.166	-0.3766	No
139	AQP1	1416203_at	17649	-0.197	-0.3880	No
140	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	17961	-0.232	-0.3995	No
141	SLC35C2	1420054_s_at 1420055_at 1460731_at	17968	-0.233	-0.3971	No
142	ADAM11	1450248_at	17984	-0.235	-0.3950	No
143	BRAF	1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at	18093	-0.251	-0.3970	No
144	NCOR1	1423200_at 1423201_at 1423202_a_at 1435914_at 1438276_at 1444760_at 1445230_at 1446574_at 1457007_at 1457938_at 1458103_at	19001	-0.395	-0.4341	No
145	TTC17	1428862_at	19021	-0.399	-0.4302	No
146	TAX1BP3	1424169_at	19165	-0.432	-0.4317	No
147	BEX2	1417388_at	19201	-0.439	-0.4282	No
148	SH3BGRL3	1416528_at	19649	-0.550	-0.4422	Yes
149	CTCF	1418330_at 1449042_at	19751	-0.580	-0.4400	Yes
150	GALNT1	1423236_at 1423237_at	19765	-0.584	-0.4338	Yes
151	CPEB4	1420617_at 1420618_at 1449931_at	19768	-0.585	-0.4270	Yes
152	FBXW11	1425461_at 1425462_at 1437468_x_at 1438336_at 1443010_at 1447294_at 1457485_at	19839	-0.606	-0.4231	Yes
153	DNM2	1423629_at 1425135_a_at 1425136_x_at 1432004_a_at 1432005_at 1437938_x_at 1443150_at 1451057_x_at	19903	-0.623	-0.4186	Yes
154	DYRK2	1428637_at 1436918_at 1456502_at 1457667_x_at	19965	-0.648	-0.4138	Yes
155	NNT	1416105_at 1432608_at 1456573_x_at	20107	-0.700	-0.4121	Yes
156	TMEPAI	1422705_at	20108	-0.700	-0.4038	Yes
157	ACYP2	1427943_at	20284	-0.775	-0.4027	Yes
158	NDRG2	1448154_at	20288	-0.776	-0.3937	Yes
159	CPNE1	1433439_at	20324	-0.789	-0.3861	Yes
160	RARA	1450180_a_at	20560	-0.896	-0.3863	Yes
161	ITGB3BP	1420665_at 1442993_at 1449953_at 1456097_a_at	20605	-0.924	-0.3775	Yes
162	FLI1	1422024_at 1433512_at 1441584_at	20787	-1.055	-0.3734	Yes
163	FOS	1423100_at	20795	-1.059	-0.3612	Yes
164	AMPD1	1434722_at	20921	-1.166	-0.3532	Yes
165	CKB	1455106_a_at	20957	-1.208	-0.3406	Yes
166	PPP2R2A	1429715_at 1437730_at 1453260_a_at	21008	-1.250	-0.3282	Yes
167	TLK1	1439158_at 1444730_at 1455024_at 1456407_a_at 1460002_at	21119	-1.377	-0.3171	Yes
168	TUBA1	1418884_x_at	21146	-1.412	-0.3016	Yes
169	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	21162	-1.435	-0.2854	Yes
170	PLA2G4B	1425045_at 1456047_at	21171	-1.443	-0.2688	Yes
171	ELMO1	1424523_at 1446610_at 1450208_a_at	21206	-1.505	-0.2527	Yes
172	HDAC7A	1420812_at 1420813_at	21228	-1.527	-0.2357	Yes
173	ABLIM1	1442376_at 1453103_at 1454708_at 1460120_at	21375	-1.739	-0.2219	Yes
174	CDC42EP3	1422642_at 1450700_at	21422	-1.841	-0.2023	Yes
175	NR4A1	1416505_at	21728	-2.816	-0.1832	Yes
176	ZFP36L1	1422528_a_at 1450644_at	21755	-2.894	-0.1504	Yes
177	CSNK1E	1417175_at 1417176_at 1435373_at	21762	-2.918	-0.1163	Yes
178	PRKAG1	1417690_at 1433533_x_at 1457803_at	21794	-3.115	-0.0810	Yes
179	RCOR1	1434336_s_at 1437545_at 1454932_at	21798	-3.139	-0.0442	Yes
180	EGR2	1427682_a_at 1427683_at	21904	-4.293	0.0015	Yes