Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$SRF_Q4
Enrichment Score (ES)	-0.4738206
Normalized Enrichment Score (NES)	-1.5374079
Nominal p-value	0.0020
FDR q-value	0.1806344
FWER p-Value	0.757

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	61	3.921	0.0381	No
2	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	376	2.102	0.0457	No
3	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	427	1.978	0.0640	No
4	VCL	1416156_at 1416157_at 1445256_at	579	1.669	0.0745	No
5	RBBP7	1415775_at 1456227_x_at	837	1.290	0.0762	No
6	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	1021	1.126	0.0795	No
7	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	1062	1.091	0.0891	No
8	EML4	1429612_at 1447838_x_at	1107	1.059	0.0981	No
9	CTGF	1416953_at	1531	0.826	0.0873	No
10	SDPR	1416778_at 1416779_at 1443832_s_at	1642	0.770	0.0903	No
11	NPR3	1435184_at 1448024_at 1450286_at	1929	0.659	0.0840	No
12	SORT1	1423362_at 1423363_at 1450955_s_at	1978	0.644	0.0885	No
13	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	2079	0.612	0.0903	No
14	IHPK1	1422968_at 1422969_s_at 1438845_at 1438846_x_at 1452694_at	2097	0.608	0.0959	No
15	INSM1	1421399_at 1455865_at	2184	0.583	0.0980	No
16	PPAP2B	1429514_at 1446850_at 1448908_at	2268	0.562	0.1001	No
17	EEF1B2	1448252_a_at	2277	0.561	0.1056	No
18	KRTCAP2	1417058_a_at 1417059_at	2305	0.552	0.1101	No
19	AGRP	1421690_s_at 1457362_at	2327	0.546	0.1148	No
20	CKM	1417614_at	2368	0.537	0.1186	No
21	PLCB3	1448661_at	2392	0.532	0.1231	No
22	GRK6	1437436_s_at 1450480_a_at 1451672_at	2877	0.438	0.1054	No
23	ABR	1433477_at	3290	0.377	0.0904	No
24	HOXB4	1451761_at 1460379_at	3452	0.358	0.0868	No
25	MMP14	1416572_at 1448383_at	3458	0.357	0.0902	No
26	NR2F1	1418157_at 1422412_x_at	3518	0.349	0.0912	No
27	ASPA	1418472_at	3706	0.332	0.0861	No
28	FGFRL1	1447878_s_at 1451912_a_at	3986	0.310	0.0765	No
29	MAP2K6	1426850_a_at 1459292_at	4140	0.298	0.0725	No
30	EFHD1	1448507_at	4502	0.276	0.0588	No
31	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	4617	0.271	0.0564	No
32	ITGB1BP2	1423238_at	4624	0.270	0.0590	No
33	KCNMB1	1421400_at 1421401_at	4632	0.270	0.0615	No
34	PPARG	1420715_a_at	4732	0.265	0.0597	No
35	CALN1	1425846_a_at	4738	0.265	0.0622	No
36	FOXE3	1422393_at	4970	0.254	0.0543	No
37	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	5173	0.245	0.0475	No
38	POU3F4	1422164_at 1422165_at	5317	0.239	0.0434	No
39	MYL1	1452651_a_at	5418	0.234	0.0413	No
40	ROCK2	1423592_at 1451041_at	5625	0.226	0.0342	No
41	FGF8	1451882_a_at	5629	0.226	0.0364	No
42	ADAMTSL1	1430313_at	5763	0.221	0.0326	No
43	IL17B	1431693_a_at	5791	0.220	0.0337	No
44	PPP2R3A	1455198_a_at	5886	0.216	0.0316	No
45	MAPKAPK2	1426648_at	6162	0.206	0.0211	No
46	RAB30	1426452_a_at	6189	0.205	0.0221	No
47	SRP54	1430476_at 1441233_at 1441480_at	6479	0.196	0.0108	No
48	RHOJ	1418892_at 1444982_at	6660	0.189	0.0045	No
49	CFL1	1448346_at 1455138_x_at	6741	0.187	0.0028	No
50	HOXD10	1418606_at	6793	0.185	0.0024	No
51	DVL3	1420457_at	7038	0.177	-0.0070	No
52	RARB	1454906_at	7121	0.175	-0.0089	No
53	MYH11	1418122_at 1448962_at	7190	0.173	-0.0102	No
54	AKAP12	1419706_a_at 1458235_at	7196	0.173	-0.0086	No
55	NLGN3	1456384_at	7259	0.171	-0.0097	No
56	VGF	1436094_at	7500	0.164	-0.0190	No
57	ACTA1	1427735_a_at	7667	0.158	-0.0250	No
58	HOXA5	1443803_x_at 1448926_at	7718	0.157	-0.0257	No
59	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	7919	0.151	-0.0333	No
60	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	7952	0.150	-0.0332	No
61	HOXC5	1439885_at 1450832_at 1456301_at	8104	0.146	-0.0386	No
62	KCNK3	1425341_at 1425342_a_at 1426058_a_at	8333	0.141	-0.0476	No
63	ASPH	1420959_at 1425274_at 1425275_at 1426015_s_at 1436455_at 1450058_at	8373	0.140	-0.0479	No
64	IGF2AS	1427394_at	8869	0.127	-0.0694	No
65	MYLK	1425504_at 1425505_at 1425506_at	8898	0.127	-0.0693	No
66	SRD5A2	1422960_at	9109	0.121	-0.0777	No
67	CRH	1457984_at	9417	0.114	-0.0906	No
68	CNN1	1417917_at	9684	0.108	-0.1017	No
69	CX3CL1	1415803_at 1415804_at 1421610_at 1441884_x_at	9728	0.106	-0.1026	No
70	MYL9	1452670_at	9956	0.101	-0.1120	No
71	MRGPRF	1425894_at	10008	0.099	-0.1133	No
72	SLC4A3	1418485_at 1453687_at	10336	0.092	-0.1273	No
73	MID1	1422055_at 1438239_at 1441929_at 1443666_at	10556	0.087	-0.1365	No
74	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	11018	0.076	-0.1569	No
75	JPH2	1421453_at 1455404_at	11180	0.073	-0.1635	No
76	TGFB1I1	1418136_at	11253	0.071	-0.1661	No
77	TNNC1	1418370_at	11414	0.068	-0.1727	No
78	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	11820	0.057	-0.1908	No
79	SLC35A2	1422827_x_at 1432533_a_at 1436664_a_at 1439433_a_at 1453858_at 1457024_x_at	11983	0.053	-0.1977	No
80	TMOD1	1419863_at 1422754_at	12129	0.049	-0.2038	No
81	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	12135	0.049	-0.2035	No
82	NPPA	1456062_at	12368	0.044	-0.2137	No
83	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	12516	0.041	-0.2201	No
84	EGR4	1449977_at	12527	0.040	-0.2201	No
85	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	12674	0.037	-0.2264	No
86	ARPC4	1423588_at 1423589_at	12684	0.037	-0.2265	No
87	TANK	1421640_a_at 1441513_at 1459668_at	12886	0.032	-0.2354	No
88	HOXB5	1418415_at	13022	0.029	-0.2413	No
89	NPAS2	1421036_at 1421037_at	13184	0.024	-0.2484	No
90	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	13267	0.022	-0.2519	No
91	MYL7	1449071_at	13289	0.021	-0.2527	No
92	BNC2	1438861_at 1440593_at 1459132_at	13352	0.019	-0.2553	No
93	NKX2-2	1421112_at	13361	0.019	-0.2555	No
94	FOSB	1422134_at	13390	0.018	-0.2566	No
95	LRRTM4	1437214_at 1455937_at	13585	0.013	-0.2654	No
96	DLL1	1419204_at	13645	0.011	-0.2680	No
97	FST	1421365_at 1434458_at	13754	0.008	-0.2729	No
98	MYO1B	1427450_x_at 1441210_at 1447364_x_at 1448989_a_at 1448990_a_at 1458007_at 1459679_s_at	13822	0.007	-0.2759	No
99	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	13833	0.006	-0.2763	No
100	SH3BGR	1422644_at	13866	0.005	-0.2777	No
101	CHD2	1444246_at 1445843_at	14051	0.000	-0.2861	No
102	PODN	1435180_at	14260	-0.006	-0.2956	No
103	DDX17	1437773_x_at 1439037_at 1452155_a_at	14403	-0.011	-0.3021	No
104	ELF4	1421337_at 1445778_at	14548	-0.015	-0.3085	No
105	TRIM46	1460568_at	14578	-0.016	-0.3097	No
106	SVIL	1427662_at 1460694_s_at 1460735_at	14581	-0.016	-0.3096	No
107	TAF5L	1448195_at	15022	-0.030	-0.3295	No
108	MAP1A	1460566_at	15276	-0.040	-0.3407	No
109	TAGLN	1423505_at	15310	-0.041	-0.3418	No
110	TADA3L	1417467_a_at 1448719_at	15343	-0.043	-0.3428	No
111	TNMD	1417979_at	15427	-0.046	-0.3462	No
112	CFL2	1418066_at 1418067_at 1431432_at	15544	-0.050	-0.3510	No
113	RIMS1	1435667_at 1438305_at 1444393_at	15693	-0.056	-0.3572	No
114	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	15774	-0.060	-0.3602	No
115	FGF17	1421523_at 1456239_at	16197	-0.080	-0.3788	No
116	SCOC	1416267_at 1430999_a_at	16581	-0.104	-0.3953	No
117	ESRRA	1442864_at 1460652_at	16656	-0.109	-0.3976	No
118	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	16704	-0.112	-0.3986	No
119	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	16728	-0.114	-0.3984	No
120	HOXA3	1427433_s_at 1441070_at 1452421_at	16836	-0.121	-0.4021	No
121	ACTG2	1422340_a_at	16889	-0.125	-0.4032	No
122	RASD2	1427343_at 1427344_s_at 1458433_at	17024	-0.136	-0.4079	No
123	MSX1	1417127_at 1448601_s_at	17047	-0.138	-0.4075	No
124	GPR20	1440021_at	17130	-0.145	-0.4098	No
125	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	17290	-0.160	-0.4154	No
126	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	17330	-0.164	-0.4155	No
127	RUNDC1	1454829_at	17393	-0.170	-0.4165	No
128	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	17407	-0.171	-0.4154	No
129	MYL6	1435041_at	17593	-0.189	-0.4219	No
130	H2AFX	1416746_at	17846	-0.217	-0.4312	No
131	PFN1	1449018_at	18106	-0.254	-0.4405	No
132	COL23A1	1429209_at 1429210_at 1440911_at	18110	-0.254	-0.4379	No
133	RSU1	1419259_at	18402	-0.294	-0.4482	No
134	TPM1	1423049_a_at 1423721_at 1447713_at 1456623_at	18508	-0.307	-0.4499	No
135	BLOC1S1	1422614_s_at	18625	-0.325	-0.4518	No
136	GADD45G	1453851_a_at	18657	-0.330	-0.4498	No
137	TGIF	1422286_a_at	18672	-0.332	-0.4470	No
138	GAB2	1419829_a_at 1420785_at 1439786_at 1446860_at	18692	-0.335	-0.4443	No
139	PHF12	1434922_at 1453579_at	18707	-0.338	-0.4414	No
140	DSTN	1417124_at	18799	-0.355	-0.4419	No
141	EDN1	1451924_a_at	18813	-0.357	-0.4388	No
142	EMILIN2	1435264_at	18814	-0.357	-0.4351	No
143	SRF	1418255_s_at 1418256_at	18829	-0.361	-0.4319	No
144	TAZ	1416207_at 1453785_at	19299	-0.462	-0.4487	No
145	ACTN1	1427385_s_at 1428585_at 1452415_at	19847	-0.607	-0.4675	Yes
146	VASP	1451097_at	19986	-0.652	-0.4670	Yes
147	STAT5B	1422102_a_at 1422103_a_at	20003	-0.660	-0.4609	Yes
148	STAG2	1421849_at 1450396_at	20247	-0.758	-0.4641	Yes
149	SGK	1416041_at	20303	-0.782	-0.4585	Yes
150	SERTAD4	1454877_at	20427	-0.835	-0.4554	Yes
151	MUS81	1431885_a_at 1450432_s_at	20466	-0.856	-0.4482	Yes
152	DGKG	1419756_at 1431167_at 1449584_at	20544	-0.889	-0.4425	Yes
153	RERE	1454670_at	20566	-0.901	-0.4340	Yes
154	NCOA6	1423374_at	20631	-0.939	-0.4272	Yes
155	IER2	1416442_at	20648	-0.946	-0.4180	Yes
156	FLNA	1426677_at	20668	-0.968	-0.4088	Yes
157	CSRP1	1425810_a_at 1425811_a_at	20738	-1.020	-0.4013	Yes
158	FOS	1423100_at	20795	-1.059	-0.3928	Yes
159	SERPINH1	1450843_a_at 1456733_x_at	20818	-1.077	-0.3826	Yes
160	DUSP2	1450698_at	20842	-1.091	-0.3722	Yes
161	JUNB	1415899_at	20884	-1.130	-0.3623	Yes
162	DUSP6	1415834_at	21026	-1.279	-0.3555	Yes
163	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	21031	-1.284	-0.3422	Yes
164	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	21081	-1.323	-0.3307	Yes
165	JMJD1A	1426810_at	21136	-1.403	-0.3185	Yes
166	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	21221	-1.522	-0.3065	Yes
167	DUSP5	1437199_at	21227	-1.527	-0.2908	Yes
168	RASSF2	1428392_at 1444889_at	21522	-2.075	-0.2826	Yes
169	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	21560	-2.181	-0.2615	Yes
170	CSDA	1435800_a_at 1451012_a_at	21579	-2.212	-0.2393	Yes
171	CDKN1B	1419497_at 1434045_at	21588	-2.239	-0.2163	Yes
172	TBL1X	1434643_at 1434644_at 1441435_at 1446736_at 1455042_at	21686	-2.601	-0.1936	Yes
173	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	21709	-2.755	-0.1658	Yes
174	NR4A1	1416505_at	21728	-2.816	-0.1372	Yes
175	EGR2	1427682_a_at 1427683_at	21904	-4.293	-0.1004	Yes
176	EGR3	1421486_at 1436329_at	21908	-4.438	-0.0542	Yes
177	EGR1	1417065_at	21928	-5.313	0.0004	Yes