Details for gene set V$RORA1

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$RORA1_01
Enrichment Score (ES)	-0.44173568
Normalized Enrichment Score (NES)	-1.4580996
Nominal p-value	0.002079002
FDR q-value	0.19135979
FWER p-Value	0.964

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RTN3	1418101_a_at 1425539_a_at 1442365_at 1443220_at	166	3.028	0.0175	No
2	SOCS4	1421273_at 1421274_at 1421275_s_at 1455142_at	206	2.776	0.0388	No
3	ATP5G1	1416020_a_at 1444874_at	227	2.644	0.0598	No
4	NRP1	1418084_at 1448943_at 1448944_at 1457198_at	379	2.098	0.0703	No
5	MEF2C	1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at	392	2.064	0.0869	No
6	ACO2	1436934_s_at 1442102_at 1451002_at	402	2.038	0.1034	No
7	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	427	1.978	0.1188	No
8	LDB2	1421101_a_at 1439557_s_at 1445126_at 1456786_at	485	1.850	0.1315	No
9	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	513	1.797	0.1452	No
10	NFYA	1422082_a_at 1427808_at 1452560_a_at	518	1.784	0.1599	No
11	HSPE1	1450668_s_at	663	1.499	0.1657	No
12	HDAC9	1421306_a_at 1434572_at	800	1.333	0.1705	No
13	UBADC1	1416963_at 1446898_at	1201	0.992	0.1604	No
14	SHH	1427571_at 1436869_at	1351	0.912	0.1611	No
15	EME1	1435054_at	1430	0.873	0.1648	No
16	PHF5A	1424170_at	1645	0.768	0.1613	No
17	MATK	1421739_a_at 1432329_a_at	1688	0.746	0.1656	No
18	TIMM9	1428010_at 1449886_a_at	1753	0.719	0.1686	No
19	CTH	1426243_at	1788	0.709	0.1729	No
20	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	2213	0.577	0.1582	No
21	MRPL27	1415690_at	2485	0.511	0.1500	No
22	SLC22A6	1417072_at 1438332_at	2526	0.504	0.1524	No
23	ATP5J2	1416269_at 1435395_s_at	2586	0.491	0.1537	No
24	RNF12	1417250_at 1418730_at 1418731_at 1439403_x_at 1440850_at 1443167_at	2615	0.485	0.1565	No
25	PPP2R5D	1450560_a_at	2644	0.481	0.1592	No
26	SPOCK2	1435026_at 1447443_at 1450451_at 1457430_at 1458360_at	2886	0.436	0.1517	No
27	GRM1	1425700_at	2962	0.426	0.1518	No
28	NELL2	1423560_at 1423561_at	3000	0.421	0.1536	No
29	ESPN	1423005_a_at 1458260_at	3009	0.418	0.1567	No
30	USH3A	1438347_at	3119	0.399	0.1550	No
31	TRAP1	1416170_at 1437379_x_at	3140	0.396	0.1574	No
32	CHRDL1	1421295_at 1424945_at 1434201_at 1456722_at	3141	0.396	0.1607	No
33	BZW2	1423456_at 1443227_at	3157	0.394	0.1633	No
34	AFG3L2	1427206_at 1427207_s_at 1454003_at	3294	0.376	0.1601	No
35	RYR1	1427306_at 1457347_at	3806	0.324	0.1393	No
36	GPR161	1436459_at 1447353_at	3921	0.315	0.1367	No
37	MPP6	1440396_at 1440490_at 1449348_at	3977	0.310	0.1368	No
38	HSPD1	1426351_at	3990	0.309	0.1388	No
39	ATPAF2	1426474_at	4167	0.296	0.1331	No
40	BTBD3	1425660_at 1433868_at 1442748_at	4272	0.291	0.1308	No
41	STAC2	1424581_at	4765	0.264	0.1104	No
42	SLC4A7	1455876_at 1457528_at	4818	0.261	0.1101	No
43	CACNA1A	1430408_at 1444455_at 1450510_a_at 1458312_at 1459996_at	5312	0.239	0.0895	No
44	GRIA1	1435239_at 1448972_at 1458285_at	5578	0.228	0.0792	No
45	EXTL2	1422538_at 1422539_at	5608	0.227	0.0797	No
46	RAB3A	1422589_at 1459980_x_at	5930	0.214	0.0667	No
47	GPR23	1434186_at 1439665_at 1452424_at	5962	0.213	0.0671	No
48	NEF3	1422520_at	6033	0.211	0.0656	No
49	CSAD	1427981_a_at	6082	0.209	0.0651	No
50	NOG	1422300_at	6324	0.201	0.0557	No
51	RGS6	1427340_at 1452399_at	6962	0.179	0.0279	No
52	ALS2CR2	1433544_at 1442452_at	6991	0.179	0.0281	No
53	CXXC5	1431469_a_at 1448960_at	7158	0.174	0.0219	No
54	ACOXL	1460470_at	7218	0.172	0.0207	No
55	HOXB3	1427605_at 1456229_at	7398	0.167	0.0138	No
56	ABHD3	1417946_at	7431	0.166	0.0137	No
57	VNN3	1420723_at	7845	0.153	-0.0040	No
58	CYP39A1	1418780_at	8050	0.148	-0.0121	No
59	GABARAPL1	1416418_at 1416419_s_at 1442572_at	8058	0.147	-0.0112	No
60	ASPH	1420959_at 1425274_at 1425275_at 1426015_s_at 1436455_at 1450058_at	8373	0.140	-0.0245	No
61	SOX15	1452017_at	8719	0.131	-0.0393	No
62	ATP1B4	1422908_at	8810	0.129	-0.0424	No
63	MYLK	1425504_at 1425505_at 1425506_at	8898	0.127	-0.0453	No
64	SNTG1	1432287_a_at 1440598_at	9102	0.122	-0.0536	No
65	ABAT	1433855_at	9253	0.118	-0.0595	No
66	NRL	1450946_at	9362	0.115	-0.0635	No
67	PCDH18	1422889_at 1422890_at 1430427_a_at	9375	0.115	-0.0631	No
68	HCN1	1450193_at	9453	0.113	-0.0658	No
69	CHST1	1449147_at	9601	0.109	-0.0716	No
70	GEMIN7	1435764_a_at	9669	0.108	-0.0738	No
71	PCDH21	1418304_at	9695	0.107	-0.0740	No
72	CX3CL1	1415803_at 1415804_at 1421610_at 1441884_x_at	9728	0.106	-0.0746	No
73	KIF5A	1434670_at	9917	0.101	-0.0824	No
74	PLA2G5	1417814_at	10004	0.100	-0.0856	No
75	SMPX	1418095_at	10342	0.092	-0.1003	No
76	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	10367	0.091	-0.1006	No
77	IL7	1422080_at 1436861_at	10371	0.091	-0.1000	No
78	UHRF2	1447217_at 1454920_at 1457070_at	10588	0.087	-0.1092	No
79	B3GALT2	1423084_at 1437433_at 1437644_at	10690	0.084	-0.1132	No
80	ESRRB	1422986_at 1436926_at 1441921_x_at	10839	0.080	-0.1193	No
81	A2BP1	1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at	11030	0.075	-0.1274	No
82	TTL	1447964_at 1451630_at 1460484_at	11042	0.075	-0.1273	No
83	LMO3	1455754_at	11248	0.071	-0.1361	No
84	MSI2	1421230_a_at 1421231_at 1435520_at 1435521_at 1436818_a_at 1441185_at 1441373_at 1443008_at 1443530_at 1446022_at 1458136_at 1458542_at	11279	0.071	-0.1369	No
85	DTNA	1419223_a_at 1425292_at 1426066_a_at 1427588_a_at 1429768_at 1447280_at 1456069_at 1458908_at	11692	0.060	-0.1554	No
86	CALCA	1427355_at 1452004_at	11729	0.059	-0.1565	No
87	EFNA3	1431170_at 1455344_at	11809	0.057	-0.1597	No
88	ZDHHC21	1429488_at	11856	0.056	-0.1613	No
89	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	12069	0.051	-0.1706	No
90	SLC25A27	1431201_at 1440090_at 1454230_a_at 1458119_at	12417	0.043	-0.1862	No
91	CNTN6	1422649_at	12641	0.037	-0.1962	No
92	RASA4	1417333_at 1441458_at	12690	0.037	-0.1981	No
93	ARX	1420926_at 1441175_at 1450042_at	12955	0.030	-0.2100	No
94	SORCS1	1421509_at 1425864_a_at 1436662_at	13153	0.025	-0.2188	No
95	NPAS2	1421036_at 1421037_at	13184	0.024	-0.2200	No
96	MRVI1	1422245_a_at 1459665_s_at	13223	0.023	-0.2216	No
97	GRIK3	1427709_at	13346	0.019	-0.2270	No
98	CNTFR	1419429_at 1431663_a_at	13353	0.019	-0.2271	No
99	SEMA3F	1420508_at 1425840_a_at 1438947_x_at	13485	0.016	-0.2330	No
100	SLC8A3	1440962_at 1450311_at	13553	0.014	-0.2360	No
101	NAV1	1436907_at 1443629_at 1446497_at	13597	0.012	-0.2379	No
102	RASAL1	1417858_at	13699	0.010	-0.2424	No
103	ADCYAP1	1423427_at 1441778_at	14001	0.002	-0.2562	No
104	KCNAB3	1421790_a_at 1423950_at	14021	0.001	-0.2571	No
105	CHD2	1444246_at 1445843_at	14051	0.000	-0.2584	No
106	NOL4	1430189_at 1441447_at 1456387_at	14474	-0.013	-0.2777	No
107	FGF9	1420795_at 1438718_at 1445258_at	14991	-0.030	-0.3012	No
108	NTF3	1434802_s_at 1450803_at	15236	-0.038	-0.3121	No
109	ITGAX	1419128_at	15431	-0.046	-0.3207	No
110	SLA	1420818_at 1420819_at 1441761_at 1447813_x_at	15852	-0.064	-0.3394	No
111	MPP3	1419077_at 1459611_at	16046	-0.073	-0.3477	No
112	SAG	1419025_at	16131	-0.077	-0.3509	No
113	USP8	1422883_at 1443420_at 1446807_at 1447386_at	16263	-0.083	-0.3563	No
114	AP3D1	1417964_at 1445280_at	16288	-0.085	-0.3567	No
115	LARGE	1417435_at 1417436_at 1441642_at 1442420_at 1443212_at 1458663_at	16365	-0.089	-0.3594	No
116	IBRDC2	1425282_at 1439153_at 1443252_at 1456834_at	16568	-0.103	-0.3678	No
117	EPHA7	1427528_a_at 1443485_at 1445635_at 1451991_at 1452380_at	16571	-0.103	-0.3671	No
118	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	16598	-0.105	-0.3674	No
119	MCC	1438081_at 1442741_at 1442892_at 1459524_at 1459752_at	16833	-0.121	-0.3772	No
120	HOXA3	1427433_s_at 1441070_at 1452421_at	16836	-0.121	-0.3762	No
121	ARF6	1418822_a_at 1418823_at 1418824_at	17021	-0.136	-0.3836	No
122	IVNS1ABP	1420961_a_at 1425718_a_at 1450084_s_at	17149	-0.147	-0.3882	No
123	RG9MTD2	1427375_at 1435035_at 1447781_s_at	17170	-0.149	-0.3879	No
124	FBXO30	1429441_at 1436550_at 1453136_at 1453137_at	17238	-0.155	-0.3897	No
125	ENO3	1417951_at 1449631_at	17277	-0.159	-0.3901	No
126	IL17RE	1426566_s_at 1439357_at 1452109_at	17363	-0.166	-0.3926	No
127	ATP1B2	1422009_at 1435148_at	17619	-0.192	-0.4027	No
128	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	17667	-0.198	-0.4033	No
129	TCF7	1433471_at 1450461_at	17685	-0.200	-0.4024	No
130	CAMK2B	1448676_at 1455869_at	18040	-0.244	-0.4166	No
131	MYL3	1427768_s_at 1427769_x_at 1428266_at	18072	-0.248	-0.4160	No
132	SCMH1	1426241_a_at 1439554_at 1441573_at 1443158_at	18251	-0.274	-0.4219	No
133	AMY2A	1457367_at	18341	-0.286	-0.4236	No
134	COLQ	1448081_at	18390	-0.293	-0.4234	No
135	GTF2IRD1	1451899_a_at 1460364_at	18444	-0.300	-0.4233	No
136	YWHAQ	1420828_s_at 1420829_a_at 1420830_x_at 1432842_s_at 1437608_x_at 1454378_at 1460590_s_at 1460621_x_at	18537	-0.311	-0.4250	No
137	PACSIN1	1449380_at 1449381_a_at	18553	-0.314	-0.4231	No
138	ACSL4	1418911_s_at 1433531_at 1451828_a_at	18565	-0.316	-0.4209	No
139	KHDRBS2	1422117_s_at 1445110_at	18681	-0.333	-0.4235	No
140	SLC18A2	1437079_at	18717	-0.340	-0.4222	No
141	ATP6V1A	1422508_at 1445916_at 1450634_at	18778	-0.351	-0.4221	No
142	PBXIP1	1451132_at	18858	-0.367	-0.4227	No
143	CAMKK2	1424474_a_at 1424475_at 1424476_at 1455401_at	19054	-0.407	-0.4283	No
144	DTNB	1437651_a_at 1445329_at 1446012_at	19096	-0.415	-0.4267	No
145	PITPNM1	1425760_a_at 1437724_x_at 1438854_x_at 1438974_x_at	19375	-0.480	-0.4355	No
146	GALT	1450187_a_at	19512	-0.517	-0.4374	Yes
147	CNTN2	1435165_at 1435166_at 1450523_at 1456962_at	19600	-0.537	-0.4370	Yes
148	RSN	1425060_s_at 1431098_at 1439800_at 1444750_at 1450351_a_at 1452929_at	19684	-0.559	-0.4362	Yes
149	ZRANB1	1415712_at 1427200_at 1436228_at	19689	-0.562	-0.4317	Yes
150	PIM1	1423006_at 1435458_at	19899	-0.622	-0.4361	Yes
151	VASP	1451097_at	19986	-0.652	-0.4346	Yes
152	PSIP1	1417166_at 1442148_at 1460403_at	19987	-0.653	-0.4292	Yes
153	YTHDF2	1451317_at 1460357_at	20017	-0.665	-0.4250	Yes
154	FBXW7	1424986_s_at 1451558_at	20033	-0.670	-0.4201	Yes
155	SUCLA2	1430402_at 1452206_at	20143	-0.711	-0.4192	Yes
156	NDRG2	1448154_at	20288	-0.776	-0.4194	Yes
157	UBL3	1423461_a_at	20334	-0.793	-0.4149	Yes
158	DACT1	1417937_at	20542	-0.888	-0.4170	Yes
159	SPAG9	1430556_at 1433648_at 1437676_at	20724	-1.014	-0.4169	Yes
160	FLI1	1422024_at 1433512_at 1441584_at	20787	-1.055	-0.4110	Yes
161	PKP3	1418831_at 1418832_at	20834	-1.087	-0.4041	Yes
162	ATP6AP2	1423662_at 1437688_x_at 1439456_x_at	20928	-1.171	-0.3986	Yes
163	STK38	1416252_at 1431303_at 1439938_at	21035	-1.285	-0.3928	Yes
164	VAMP2	1420833_at 1420834_at	21214	-1.515	-0.3884	Yes
165	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	21221	-1.522	-0.3761	Yes
166	DBP	1418174_at 1438211_s_at	21254	-1.561	-0.3646	Yes
167	LCN2	1427747_a_at	21308	-1.632	-0.3534	Yes
168	BCL9	1445859_at 1446767_at 1451574_at 1455565_at	21332	-1.670	-0.3406	Yes
169	ARNTL	1425099_a_at 1446544_at 1457740_at	21339	-1.682	-0.3269	Yes
170	JMJD1B	1428320_at 1438508_at 1458417_at	21391	-1.777	-0.3145	Yes
171	SYNE1	1421545_a_at 1455225_at 1455493_at	21441	-1.878	-0.3012	Yes
172	CACNB2	1441521_at 1444693_at 1446632_at 1452476_at 1456401_at	21490	-2.012	-0.2866	Yes
173	MYB	1421317_x_at 1422734_a_at 1450194_a_at	21514	-2.063	-0.2706	Yes
174	IHPK2	1428373_at 1435319_at	21544	-2.129	-0.2542	Yes
175	ANGPT1	1421441_at 1438936_s_at 1438937_x_at 1439066_at 1446656_at 1450717_at 1457381_at	21555	-2.161	-0.2367	Yes
176	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	21560	-2.181	-0.2188	Yes
177	PPP2CA	1417367_at 1444875_at 1456390_at	21563	-2.190	-0.2007	Yes
178	SATB1	1416007_at 1416008_at 1439203_at 1439449_at 1443284_at 1456902_at	21569	-2.193	-0.1827	Yes
179	NFATC3	1419976_s_at 1452497_a_at	21574	-2.204	-0.1646	Yes
180	SCOTIN	1423986_a_at 1437503_a_at	21682	-2.581	-0.1480	Yes
181	NEO1	1423513_at 1434931_at 1440789_at 1444295_at 1447693_s_at 1447694_x_at 1459485_at	21731	-2.823	-0.1268	Yes
182	ZFP36L1	1422528_a_at 1450644_at	21755	-2.894	-0.1038	Yes
183	RCOR1	1434336_s_at 1437545_at 1454932_at	21798	-3.139	-0.0796	Yes
184	STEAP2	1428636_at 1438773_at 1442359_at 1444290_at 1446071_at	21806	-3.194	-0.0534	Yes
185	VAMP1	1421862_a_at 1421863_at	21835	-3.343	-0.0269	Yes
186	ATP8B2	1434026_at 1441699_at 1452450_at	21884	-3.796	0.0024	Yes