Details for gene set V$MYOD

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$MYOD_01
Enrichment Score (ES)	-0.49891177
Normalized Enrichment Score (NES)	-1.6167545
Nominal p-value	0.001996008
FDR q-value	0.19480161
FWER p-Value	0.396

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PRICKLE1	1441663_at 1442172_at 1442400_at 1444759_at 1452249_at 1457637_at	202	2.807	0.0243	No
2	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	492	1.840	0.0331	No
3	PTK7	1452589_at	613	1.592	0.0466	No
4	INVS	1419308_at 1444709_at 1460491_at	817	1.316	0.0530	No
5	LUC7L	1428255_at 1431181_a_at 1431664_at 1452708_a_at	1799	0.704	0.0164	No
6	COL11A2	1423578_at	2198	0.579	0.0050	No
7	SYT4	1415844_at 1415845_at	2221	0.575	0.0109	No
8	TNFRSF21	1422740_at 1450731_s_at	2314	0.549	0.0133	No
9	SCN5A	1422194_at 1458813_at	2353	0.540	0.0180	No
10	CKM	1417614_at	2368	0.537	0.0238	No
11	CENTB1	1434873_a_at 1434874_x_at 1437117_at 1455125_at	2721	0.465	0.0132	No
12	USP54	1428731_at	2737	0.463	0.0180	No
13	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	2876	0.438	0.0169	No
14	DDAH2	1416457_at	2924	0.430	0.0199	No
15	CASKIN2	1450691_at	3196	0.388	0.0121	No
16	GCK	1419146_a_at 1425303_at	3216	0.385	0.0158	No
17	HYAL2	1448679_at	3366	0.367	0.0134	No
18	CYP26A1	1419430_at	3561	0.345	0.0086	No
19	SORCS2	1419358_at	3601	0.341	0.0109	No
20	CAV3	1418413_at	3603	0.341	0.0149	No
21	KCNN2	1445676_at 1448927_at	3621	0.339	0.0182	No
22	WNT6	1419708_at 1435980_x_at	3634	0.338	0.0217	No
23	ANKRD2	1419621_at	3668	0.335	0.0242	No
24	VKORC1L1	1429092_at 1434916_at	3751	0.329	0.0244	No
25	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	3804	0.324	0.0259	No
26	DRD1IP	1428813_a_at	3914	0.316	0.0246	No
27	RXRG	1418782_at	4125	0.299	0.0186	No
28	HES6	1436050_x_at 1452021_a_at	4153	0.298	0.0209	No
29	CCNL2	1432195_s_at 1453740_a_at 1454149_a_at	4195	0.295	0.0225	No
30	ABLIM3	1434013_at 1446069_at	4541	0.274	0.0100	No
31	CSMD3	1438272_at 1438572_at 1454245_at	4737	0.265	0.0042	No
32	CALN1	1425846_a_at	4738	0.265	0.0073	No
33	TRIM37	1434554_at 1435604_at 1436393_a_at 1436394_at 1455012_s_at	4786	0.263	0.0083	No
34	FGF11	1421793_at 1439959_at	5240	0.242	-0.0096	No
35	FES	1427368_x_at 1452410_a_at	5287	0.240	-0.0088	No
36	H2AFZ	1441370_at	5496	0.231	-0.0156	No
37	OMG	1418212_at	5617	0.227	-0.0184	No
38	KAZALD1	1436528_at	5741	0.222	-0.0214	No
39	HMGN2	1433507_a_at	5868	0.217	-0.0246	No
40	GRIK5	1418784_at	5945	0.214	-0.0256	No
41	EML1	1458317_at	5946	0.214	-0.0230	No
42	MT3	1420575_at	5959	0.213	-0.0210	No
43	GABRQ	1421536_at	6097	0.209	-0.0248	No
44	GDPD2	1429076_a_at	6220	0.204	-0.0280	No
45	JMJD2C	1424458_at 1430628_at 1447091_at	6254	0.203	-0.0270	No
46	HTR2C	1435513_at 1450477_at	6286	0.202	-0.0261	No
47	CNNM2	1423475_at 1451007_at 1458132_at	6352	0.200	-0.0267	No
48	CACNA2D2	1426185_at	6385	0.199	-0.0257	No
49	SOST	1421245_at 1436240_at 1450179_at	6468	0.196	-0.0272	No
50	KIF9	1420395_a_at	6629	0.190	-0.0322	No
51	CFL1	1448346_at 1455138_x_at	6741	0.187	-0.0351	No
52	SCG2	1450708_at	6750	0.187	-0.0332	No
53	UBXD3	1426007_a_at 1451906_at 1456385_x_at 1457581_at	7058	0.177	-0.0452	No
54	TMEM17	1456332_at 1459997_s_at	7080	0.176	-0.0441	No
55	EFNA1	1416895_at 1448510_at	7198	0.173	-0.0474	No
56	ITSN1	1421192_a_at 1425899_a_at 1435884_at 1435885_s_at 1440637_at 1441034_at 1442637_at 1452338_s_at 1459621_at	7330	0.169	-0.0514	No
57	SRPK1	1454042_a_at 1455107_at	7367	0.168	-0.0510	No
58	ARRDC3	1454617_at	7471	0.165	-0.0538	No
59	GPR37	1450875_at	7510	0.164	-0.0536	No
60	WT1	1425995_s_at 1443221_at	7715	0.157	-0.0611	No
61	SYT2	1420418_at 1440323_at 1449866_at	7829	0.153	-0.0644	No
62	DARS	1423800_at	7986	0.149	-0.0698	No
63	TSGA14	1419686_at 1434576_at 1443792_at 1445416_at	8560	0.135	-0.0945	No
64	SLC5A3	1422170_at	8660	0.133	-0.0975	No
65	CRLF1	1418476_at	8858	0.128	-0.1050	No
66	GNG8	1457755_at	8861	0.128	-0.1036	No
67	POLR1D	1447320_x_at 1448287_at 1451120_at 1459657_s_at	9532	0.111	-0.1330	No
68	PCDH1	1452294_at	9712	0.107	-0.1400	No
69	HOXA10	1431475_a_at 1446408_at	9730	0.106	-0.1395	No
70	ETV1	1422607_at 1445314_at 1450684_at	9741	0.106	-0.1387	No
71	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	9955	0.101	-0.1473	No
72	KCNK16	1429913_at	10011	0.099	-0.1486	No
73	UNC13B	1417757_at 1443308_at	10097	0.098	-0.1513	No
74	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	10250	0.094	-0.1572	No
75	EXOSC3	1431502_a_at	10307	0.093	-0.1587	No
76	GABRA3	1421263_at	10316	0.093	-0.1579	No
77	USP3	1425022_at 1425023_at 1435531_at 1441056_at 1446886_at	10398	0.091	-0.1606	No
78	RANGAP1	1423749_s_at 1444581_at 1451092_a_at	10479	0.089	-0.1632	No
79	FNDC5	1435115_at 1453135_at	10591	0.086	-0.1672	No
80	DRP2	1440452_at 1441224_at 1441542_at	10677	0.084	-0.1701	No
81	MUSK	1450511_at	10727	0.083	-0.1714	No
82	RORA	1420583_a_at 1424034_at 1424035_at 1436325_at 1436326_at 1441085_at 1443511_at 1443647_at 1446360_at 1455165_at 1457177_at 1458129_at	10762	0.082	-0.1720	No
83	CHRNG	1427728_at 1449532_at 1452520_a_at	10855	0.080	-0.1752	No
84	SLC6A7	1455469_at	10933	0.078	-0.1778	No
85	NHLH1	1419533_at	10992	0.076	-0.1796	No
86	ITGA3	1421997_s_at 1455158_at 1460305_at	11326	0.070	-0.1940	No
87	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	11555	0.064	-0.2038	No
88	POFUT1	1443881_at 1450137_at 1456323_at	11580	0.063	-0.2041	No
89	PGF	1418471_at	11698	0.060	-0.2088	No
90	TNNT2	1418726_a_at 1424967_x_at 1440424_at	11771	0.058	-0.2114	No
91	GCNT3	1424901_at 1430963_at	11793	0.058	-0.2116	No
92	GNAS	1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at	11887	0.055	-0.2153	No
93	LAMC2	1421279_at 1452505_at	12303	0.046	-0.2338	No
94	STC2	1419503_at 1445186_at 1449484_at	12310	0.045	-0.2335	No
95	ALCAM	1426300_at 1426301_at 1437466_at 1437467_at 1443086_at 1446720_at 1447040_at	12491	0.041	-0.2413	No
96	CALB1	1417504_at 1448738_at 1458836_at	12531	0.040	-0.2426	No
97	MOSPD1	1424280_at	12578	0.039	-0.2443	No
98	RAB26	1435500_at	12673	0.037	-0.2481	No
99	CRYZL1	1430546_at 1430547_s_at 1440045_at 1442574_at 1451473_a_at	12817	0.034	-0.2543	No
100	AAK1	1420026_at 1435038_s_at 1441782_at	12923	0.031	-0.2588	No
101	NTRK2	1420837_at 1420838_at 1435196_at 1435305_at 1437560_at 1446712_at	13260	0.022	-0.2739	No
102	KTN1	1446702_at 1446749_at 1455434_a_at 1458502_at 1459429_at	13386	0.018	-0.2795	No
103	PRELP	1416321_s_at 1416322_at	13432	0.017	-0.2813	No
104	PSD	1435780_at	13449	0.017	-0.2819	No
105	SEMA3F	1420508_at 1425840_a_at 1438947_x_at	13485	0.016	-0.2833	No
106	ELA3A	1415883_a_at 1415884_at 1435611_x_at 1442170_at	13968	0.003	-0.3054	No
107	DSCAM	1419293_at 1431801_at 1441082_at 1449411_at	14075	-0.000	-0.3103	No
108	ARL4A	1425411_at 1431429_a_at 1435092_at	14097	-0.001	-0.3112	No
109	ELF4	1421337_at 1445778_at	14548	-0.015	-0.3317	No
110	KCNH5	1441742_at	14572	-0.016	-0.3326	No
111	FGF9	1420795_at 1438718_at 1445258_at	14991	-0.030	-0.3514	No
112	SOX12	1439754_at 1455562_at 1456882_at	15134	-0.034	-0.3576	No
113	EGLN1	1423785_at 1443389_at 1451110_at	15218	-0.038	-0.3609	No
114	GRID2	1421435_at 1421436_at 1435487_at 1437824_at 1443101_at 1446879_at 1458756_at 1459245_s_at	15323	-0.042	-0.3652	No
115	SPOP	1416524_at 1416525_at 1444578_at 1447827_x_at 1455510_at 1458886_at	15718	-0.057	-0.3826	No
116	MFAP2	1417359_at 1447833_x_at	15763	-0.059	-0.3839	No
117	TUBA4	1417373_a_at 1417374_at 1417375_at	16036	-0.072	-0.3956	No
118	ERBB3	1434606_at 1452482_at	16096	-0.075	-0.3974	No
119	HRH3	1445285_at 1448807_at	16103	-0.075	-0.3968	No
120	RAC2	1417620_at 1440208_at	16178	-0.079	-0.3992	No
121	GNB3	1449159_at	16273	-0.084	-0.4025	No
122	TNFSF13	1445227_at	16359	-0.089	-0.4054	No
123	NCDN	1416852_a_at 1416853_at	16457	-0.095	-0.4087	No
124	KCNN3	1421632_at 1459308_at	16505	-0.099	-0.4097	No
125	CAMK2A	1437125_at 1441734_at 1442707_at 1443876_at 1452453_a_at 1457311_at	16595	-0.105	-0.4125	No
126	KCNB1	1423179_at 1423180_at	16644	-0.108	-0.4134	No
127	KCNE1L	1416640_at	16672	-0.110	-0.4133	No
128	BCL2L1	1420887_a_at 1420888_at 1426050_at 1426191_a_at	16797	-0.118	-0.4176	No
129	LNX2	1460249_at	17018	-0.136	-0.4261	No
130	CBX8	1419198_at 1419199_at	17172	-0.149	-0.4313	No
131	NDUFB8	1448198_a_at 1458404_at	17221	-0.154	-0.4317	No
132	QTRTD1	1421320_a_at 1451199_at	17653	-0.197	-0.4491	No
133	SPI1	1418747_at	17726	-0.205	-0.4500	No
134	PAX9	1421246_at 1421247_at	18527	-0.309	-0.4831	No
135	ATOH7	1422929_s_at 1450796_at	18873	-0.370	-0.4945	Yes
136	RBM3	1429169_at	18955	-0.386	-0.4936	Yes
137	TMEM23	1426575_at 1426576_at 1436499_at 1442079_at 1445103_at 1457968_at	18994	-0.394	-0.4906	Yes
138	ITGA6	1422444_at 1422445_at	19157	-0.431	-0.4929	Yes
139	ARID5A	1451340_at	19284	-0.457	-0.4932	Yes
140	TAZ	1416207_at 1453785_at	19299	-0.462	-0.4884	Yes
141	CHD6	1427384_at 1431047_at	19393	-0.483	-0.4868	Yes
142	CLDN9	1439427_at 1450524_at	19535	-0.520	-0.4871	Yes
143	RIMS2	1422809_at 1432102_at 1436470_at 1443215_at 1450761_s_at	19648	-0.550	-0.4857	Yes
144	ZRANB1	1415712_at 1427200_at 1436228_at	19689	-0.562	-0.4808	Yes
145	EIF2C1	1434331_at	19806	-0.597	-0.4789	Yes
146	PSIP1	1417166_at 1442148_at 1460403_at	19987	-0.653	-0.4794	Yes
147	BTBD11	1428377_at 1459838_s_at 1459839_x_at	20075	-0.688	-0.4752	Yes
148	MGAT1	1423609_a_at	20118	-0.703	-0.4687	Yes
149	CORO2A	1445034_at 1452367_at	20127	-0.706	-0.4606	Yes
150	COL18A1	1418237_s_at 1426955_at	20317	-0.786	-0.4599	Yes
151	CPNE1	1433439_at	20324	-0.789	-0.4507	Yes
152	EPHB6	1418051_at	20557	-0.895	-0.4506	Yes
153	RARA	1450180_a_at	20560	-0.896	-0.4400	Yes
154	WBP2	1448121_at	20735	-1.019	-0.4358	Yes
155	UBXD2	1426484_at 1426485_at 1426486_at	20746	-1.026	-0.4240	Yes
156	CENTG3	1423910_at 1434032_at	20822	-1.081	-0.4145	Yes
157	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20871	-1.116	-0.4033	Yes
158	PIM2	1417216_at	20918	-1.164	-0.3915	Yes
159	BACH1	1440831_at 1449311_at	21126	-1.386	-0.3844	Yes
160	STIM1	1436945_x_at 1448320_at 1458460_at	21132	-1.396	-0.3679	Yes
161	TUBA1	1418884_x_at	21146	-1.412	-0.3516	Yes
162	DGKD	1433564_at 1439873_at 1442254_at 1454655_at	21155	-1.423	-0.3350	Yes
163	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	21162	-1.435	-0.3181	Yes
164	ELMO1	1424523_at 1446610_at 1450208_a_at	21206	-1.505	-0.3020	Yes
165	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	21221	-1.522	-0.2844	Yes
166	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	21244	-1.549	-0.2669	Yes
167	EIF4ENIF1	1431075_a_at 1439169_at	21252	-1.558	-0.2486	Yes
168	PRKCQ	1426044_a_at	21352	-1.700	-0.2328	Yes
169	CACNB2	1441521_at 1444693_at 1446632_at 1452476_at 1456401_at	21490	-2.012	-0.2150	Yes
170	FUT8	1441015_at 1442483_at 1443656_at 1456367_at 1460319_at	21554	-2.160	-0.1920	Yes
171	PAK2	1434250_at 1454887_at	21638	-2.412	-0.1670	Yes
172	CHCHD3	1431241_at 1437599_at 1451504_at 1459143_at	21880	-3.718	-0.1335	Yes
173	EGR1	1417065_at	21928	-5.313	-0.0721	Yes
174	PTK2B	1434653_at 1442437_at 1442927_at	21933	-6.050	0.0001	Yes