Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | SCID |
GeneSet | V$MYCMAX_01 |
Enrichment Score (ES) | 0.4948411 |
Normalized Enrichment Score (NES) | 1.6388531 |
Nominal p-value | 0.0 |
FDR q-value | 0.08792141 |
FWER p-Value | 0.294 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | EIF2C2 | 1426366_at 1438043_at | 22 | 5.055 | 0.0465 | Yes | ||
2 | HNRPA1 | 1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at | 92 | 3.541 | 0.0766 | Yes | ||
3 | MTHFD1 | 1415916_a_at 1415917_at 1436704_x_at | 161 | 3.058 | 0.1022 | Yes | ||
4 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 251 | 2.504 | 0.1216 | Yes | ||
5 | FOXO3A | 1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at | 256 | 2.476 | 0.1447 | Yes | ||
6 | CSK | 1423518_at 1439744_at | 289 | 2.344 | 0.1652 | Yes | ||
7 | CAD | 1440857_at 1452829_at 1452830_s_at | 299 | 2.315 | 0.1866 | Yes | ||
8 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 310 | 2.282 | 0.2075 | Yes | ||
9 | KCNQ5 | 1427426_at 1441071_at | 444 | 1.943 | 0.2197 | Yes | ||
10 | TGFB2 | 1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at | 495 | 1.831 | 0.2346 | Yes | ||
11 | KCTD15 | 1435339_at | 520 | 1.779 | 0.2502 | Yes | ||
12 | TFRC | 1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at | 563 | 1.696 | 0.2642 | Yes | ||
13 | SDC1 | 1415943_at 1415944_at 1437279_x_at 1448158_at | 588 | 1.648 | 0.2786 | Yes | ||
14 | LAP3 | 1450860_at | 612 | 1.594 | 0.2925 | Yes | ||
15 | TIMM10 | 1417499_at | 620 | 1.571 | 0.3069 | Yes | ||
16 | BCL7C | 1440906_at 1443898_at 1446516_at 1447139_at 1449523_at | 637 | 1.546 | 0.3207 | Yes | ||
17 | USP15 | 1436891_at 1446186_at 1454036_a_at 1455842_x_at | 681 | 1.471 | 0.3326 | Yes | ||
18 | KCMF1 | 1418694_at 1418695_a_at 1449180_at | 743 | 1.404 | 0.3430 | Yes | ||
19 | NRIP3 | 1418104_at 1431597_a_at 1448954_at | 748 | 1.401 | 0.3559 | Yes | ||
20 | IFRD2 | 1451016_at | 783 | 1.356 | 0.3671 | Yes | ||
21 | NPM1 | 1415839_a_at 1420267_at 1420268_x_at 1420269_at 1432416_a_at | 828 | 1.306 | 0.3773 | Yes | ||
22 | SFXN2 | 1439966_x_at 1440786_x_at | 1170 | 1.010 | 0.3712 | Yes | ||
23 | QTRT1 | 1450630_at | 1263 | 0.958 | 0.3759 | Yes | ||
24 | CNNM1 | 1420354_at 1441312_at 1445979_at | 1287 | 0.941 | 0.3837 | Yes | ||
25 | PUS1 | 1418869_a_at | 1318 | 0.926 | 0.3910 | Yes | ||
26 | NUDC | 1419471_a_at | 1331 | 0.921 | 0.3991 | Yes | ||
27 | PTGES2 | 1417591_at | 1407 | 0.883 | 0.4040 | Yes | ||
28 | RANBP1 | 1422547_at | 1425 | 0.874 | 0.4114 | Yes | ||
29 | ATAD3A | 1422461_at 1437343_x_at 1438178_x_at 1456541_x_at | 1426 | 0.873 | 0.4196 | Yes | ||
30 | PRDX4 | 1416166_a_at 1416167_at 1431269_at | 1457 | 0.859 | 0.4263 | Yes | ||
31 | PPRC1 | 1426381_at | 1520 | 0.834 | 0.4313 | Yes | ||
32 | RCOR2 | 1417302_at | 1627 | 0.779 | 0.4337 | Yes | ||
33 | PA2G4 | 1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at | 1643 | 0.770 | 0.4403 | Yes | ||
34 | TIMM9 | 1428010_at 1449886_a_at | 1753 | 0.719 | 0.4420 | Yes | ||
35 | LYAR | 1417511_at | 1818 | 0.699 | 0.4456 | Yes | ||
36 | HMGA1 | 1416184_s_at | 1840 | 0.692 | 0.4512 | Yes | ||
37 | NOL5A | 1426533_at 1455035_s_at | 1876 | 0.677 | 0.4559 | Yes | ||
38 | RCL1 | 1416730_at 1457992_at | 1957 | 0.650 | 0.4584 | Yes | ||
39 | DNAJB5 | 1421961_a_at 1421962_at 1450436_s_at | 2110 | 0.604 | 0.4571 | Yes | ||
40 | RAB3IL1 | 1419991_at 1419992_x_at 1419993_at 1425133_s_at 1428391_at 1456442_at | 2234 | 0.572 | 0.4568 | Yes | ||
41 | EEF1B2 | 1448252_a_at | 2277 | 0.561 | 0.4601 | Yes | ||
42 | KRTCAP2 | 1417058_a_at 1417059_at | 2305 | 0.552 | 0.4640 | Yes | ||
43 | PPAT | 1428543_at 1441770_at 1452831_s_at | 2372 | 0.537 | 0.4661 | Yes | ||
44 | NDUFS1 | 1425143_a_at 1453354_at | 2398 | 0.531 | 0.4699 | Yes | ||
45 | UBE2B | 1423106_at 1423107_at 1430177_at 1439477_at 1460132_at | 2406 | 0.530 | 0.4745 | Yes | ||
46 | G6PC3 | 1428245_at | 2417 | 0.526 | 0.4790 | Yes | ||
47 | RPS19 | 1449243_a_at 1460442_at | 2419 | 0.526 | 0.4839 | Yes | ||
48 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 2458 | 0.516 | 0.4870 | Yes | ||
49 | MRPL40 | 1448849_at | 2546 | 0.499 | 0.4877 | Yes | ||
50 | ILF3 | 1422546_at 1436802_at 1460669_at | 2570 | 0.492 | 0.4913 | Yes | ||
51 | ACY1 | 1419173_at | 2637 | 0.482 | 0.4928 | Yes | ||
52 | ARL3 | 1450706_a_at | 2689 | 0.469 | 0.4948 | Yes | ||
53 | HNRPDL | 1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at | 2826 | 0.448 | 0.4928 | No | ||
54 | PRPS1 | 1416052_at | 3171 | 0.392 | 0.4807 | No | ||
55 | PSME3 | 1418078_at 1418079_at 1438509_at | 3225 | 0.385 | 0.4818 | No | ||
56 | SLC12A5 | 1425337_at 1445933_at 1451674_at | 3313 | 0.374 | 0.4814 | No | ||
57 | FOXD3 | 1422210_at | 3541 | 0.347 | 0.4742 | No | ||
58 | NTN2L | 1422056_at | 3915 | 0.316 | 0.4600 | No | ||
59 | FKBP11 | 1417267_s_at 1425839_at 1425938_a_at | 4021 | 0.306 | 0.4580 | No | ||
60 | COL2A1 | 1450567_a_at | 4182 | 0.296 | 0.4535 | No | ||
61 | ZBTB10 | 1458695_at | 4304 | 0.288 | 0.4506 | No | ||
62 | IQGAP2 | 1433885_at 1459894_at | 4324 | 0.287 | 0.4524 | No | ||
63 | GPS1 | 1415699_a_at | 4339 | 0.286 | 0.4545 | No | ||
64 | BOK | 1417040_a_at | 4427 | 0.280 | 0.4531 | No | ||
65 | RFX4 | 1432053_at 1436931_at 1443312_at | 4552 | 0.273 | 0.4500 | No | ||
66 | ADAMTS19 | 1442459_at 1446513_at | 4619 | 0.271 | 0.4495 | No | ||
67 | STMN1 | 1415849_s_at | 4880 | 0.258 | 0.4400 | No | ||
68 | DAZAP1 | 1419275_at | 4883 | 0.258 | 0.4423 | No | ||
69 | GPRC5C | 1424450_at 1452947_at | 4896 | 0.258 | 0.4442 | No | ||
70 | PAICS | 1423564_a_at 1423565_at 1436298_x_at | 4914 | 0.257 | 0.4458 | No | ||
71 | TRIB1 | 1424880_at 1424881_at | 5044 | 0.251 | 0.4422 | No | ||
72 | CGREF1 | 1424528_at 1424529_s_at | 5147 | 0.246 | 0.4398 | No | ||
73 | FGF6 | 1427582_at | 5519 | 0.230 | 0.4249 | No | ||
74 | PITX3 | 1449917_at | 5520 | 0.230 | 0.4271 | No | ||
75 | SCRT2 | 1440930_a_at 1440931_at 1446986_at 1457310_x_at | 6109 | 0.208 | 0.4020 | No | ||
76 | IPO13 | 1433464_at | 6217 | 0.204 | 0.3990 | No | ||
77 | GIT1 | 1454759_at | 6339 | 0.200 | 0.3954 | No | ||
78 | EFNB1 | 1418285_at 1418286_a_at 1451591_a_at | 6368 | 0.199 | 0.3959 | No | ||
79 | TESK2 | 1426546_at | 6451 | 0.197 | 0.3940 | No | ||
80 | EIF4E | 1450909_at 1457489_at 1459371_at | 6477 | 0.196 | 0.3947 | No | ||
81 | HOXA11 | 1420414_at | 6511 | 0.195 | 0.3950 | No | ||
82 | BMP4 | 1422912_at | 6993 | 0.179 | 0.3746 | No | ||
83 | BCAS3 | 1423528_at 1428454_at 1457817_at 1458557_at | 7006 | 0.178 | 0.3757 | No | ||
84 | RTN4RL2 | 1439573_at | 7046 | 0.177 | 0.3756 | No | ||
85 | UBXD3 | 1426007_a_at 1451906_at 1456385_x_at 1457581_at | 7058 | 0.177 | 0.3767 | No | ||
86 | ABCA1 | 1421839_at 1421840_at 1450392_at | 7199 | 0.173 | 0.3719 | No | ||
87 | RHEBL1 | 1447818_x_at 1451516_at | 7294 | 0.170 | 0.3692 | No | ||
88 | CLN3 | 1417551_at 1457789_at | 7810 | 0.154 | 0.3470 | No | ||
89 | RUNX2 | 1424704_at 1425389_a_at 1426034_a_at | 7937 | 0.151 | 0.3426 | No | ||
90 | TCERG1 | 1421033_a_at 1434434_s_at 1450100_a_at | 8345 | 0.140 | 0.3252 | No | ||
91 | APOA5 | 1417610_at | 8656 | 0.133 | 0.3122 | No | ||
92 | NEUROD1 | 1426412_at 1426413_at | 8767 | 0.130 | 0.3084 | No | ||
93 | SLC1A7 | 1456971_at | 8811 | 0.129 | 0.3076 | No | ||
94 | ETV4 | 1423232_at 1443381_at | 8989 | 0.124 | 0.3006 | No | ||
95 | SATB2 | 1425904_at 1427017_at | 9043 | 0.123 | 0.2993 | No | ||
96 | PCDHA10 | 1427687_at | 9128 | 0.121 | 0.2966 | No | ||
97 | PPP1R9B | 1447247_at 1447486_at | 9214 | 0.119 | 0.2938 | No | ||
98 | RAI14 | 1417400_at 1417401_at 1441030_at 1444777_at | 9462 | 0.113 | 0.2835 | No | ||
99 | GPC3 | 1443240_at 1446525_at 1450990_at | 9472 | 0.113 | 0.2842 | No | ||
100 | ETV1 | 1422607_at 1445314_at 1450684_at | 9741 | 0.106 | 0.2728 | No | ||
101 | LRP8 | 1421459_a_at 1440882_at 1442347_at | 9861 | 0.103 | 0.2683 | No | ||
102 | PPARGC1B | 1438775_at 1449945_at 1457578_at | 9931 | 0.101 | 0.2661 | No | ||
103 | SLC6A15 | 1426712_at | 9990 | 0.100 | 0.2644 | No | ||
104 | MAT2A | 1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at | 10211 | 0.095 | 0.2552 | No | ||
105 | POU3F2 | 1450831_at 1453478_at 1457734_at | 10230 | 0.094 | 0.2552 | No | ||
106 | OPRD1 | 1422121_at | 10321 | 0.092 | 0.2520 | No | ||
107 | SYT3 | 1417708_at | 10854 | 0.080 | 0.2282 | No | ||
108 | RAMP2 | 1418187_at | 11219 | 0.072 | 0.2122 | No | ||
109 | HSPBAP1 | 1428566_at 1428567_at 1441900_x_at 1442842_at | 11227 | 0.072 | 0.2125 | No | ||
110 | LIN28 | 1437752_at | 11363 | 0.069 | 0.2070 | No | ||
111 | U2AF2 | 1417260_at | 11817 | 0.057 | 0.1867 | No | ||
112 | ZADH2 | 1451277_at | 12101 | 0.050 | 0.1741 | No | ||
113 | FLT3 | 1419538_at | 12533 | 0.040 | 0.1547 | No | ||
114 | FGF14 | 1435747_at 1447221_x_at 1447480_at 1449958_a_at 1458830_at 1459073_x_at | 12597 | 0.039 | 0.1522 | No | ||
115 | PTMA | 1423455_at | 12819 | 0.034 | 0.1423 | No | ||
116 | HOXB5 | 1418415_at | 13022 | 0.029 | 0.1333 | No | ||
117 | CHRM1 | 1439611_at 1450833_at | 13032 | 0.028 | 0.1332 | No | ||
118 | ELAVL3 | 1452524_a_at | 13090 | 0.027 | 0.1308 | No | ||
119 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 13210 | 0.024 | 0.1256 | No | ||
120 | CEBPA | 1418982_at | 13373 | 0.019 | 0.1183 | No | ||
121 | SNCAIP | 1423499_at 1430463_a_at 1441037_at | 13376 | 0.018 | 0.1184 | No | ||
122 | IPO7 | 1442511_at 1454955_at 1458165_at | 13685 | 0.010 | 0.1043 | No | ||
123 | KIAA0427 | 1427743_at 1436047_at | 13848 | 0.006 | 0.0969 | No | ||
124 | DAZL | 1419542_at 1449502_at | 13907 | 0.004 | 0.0943 | No | ||
125 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 14132 | -0.002 | 0.0840 | No | ||
126 | HHIP | 1421426_at 1437933_at 1438083_at 1455277_at | 14343 | -0.008 | 0.0744 | No | ||
127 | TRIM46 | 1460568_at | 14578 | -0.016 | 0.0638 | No | ||
128 | MEOX2 | 1424233_at 1424234_s_at | 15069 | -0.032 | 0.0416 | No | ||
129 | TUBA4 | 1417373_a_at 1417374_at 1417375_at | 16036 | -0.072 | -0.0021 | No | ||
130 | MPP3 | 1419077_at 1459611_at | 16046 | -0.073 | -0.0019 | No | ||
131 | SNX5 | 1417646_a_at 1417647_at 1417648_s_at 1437074_at 1448791_at | 16164 | -0.078 | -0.0065 | No | ||
132 | ESRRA | 1442864_at 1460652_at | 16656 | -0.109 | -0.0281 | No | ||
133 | ATOH8 | 1426418_at | 16818 | -0.120 | -0.0343 | No | ||
134 | HOXA3 | 1427433_s_at 1441070_at 1452421_at | 16836 | -0.121 | -0.0340 | No | ||
135 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 16864 | -0.123 | -0.0341 | No | ||
136 | KCNN4 | 1421038_a_at 1435945_a_at | 16928 | -0.128 | -0.0358 | No | ||
137 | GJA1 | 1415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at | 17001 | -0.135 | -0.0378 | No | ||
138 | IVNS1ABP | 1420961_a_at 1425718_a_at 1450084_s_at | 17149 | -0.147 | -0.0432 | No | ||
139 | PABPC1 | 1418883_a_at 1419500_at 1453840_at | 17229 | -0.154 | -0.0454 | No | ||
140 | CBX5 | 1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at | 17244 | -0.156 | -0.0446 | No | ||
141 | UBE1 | 1442767_s_at 1448116_at | 17250 | -0.156 | -0.0433 | No | ||
142 | ENO3 | 1417951_at 1449631_at | 17277 | -0.159 | -0.0430 | No | ||
143 | LZTS2 | 1426409_at | 17520 | -0.182 | -0.0524 | No | ||
144 | QTRTD1 | 1421320_a_at 1451199_at | 17653 | -0.197 | -0.0566 | No | ||
145 | ASXL1 | 1434561_at 1435077_at 1458380_at | 17671 | -0.198 | -0.0556 | No | ||
146 | MYCL1 | 1422087_at 1422088_at 1434777_at | 17772 | -0.210 | -0.0582 | No | ||
147 | SFRS14 | 1435798_a_at 1435799_at 1436005_at | 17934 | -0.228 | -0.0634 | No | ||
148 | STXBP2 | 1416449_x_at 1437048_x_at 1448341_a_at | 18001 | -0.238 | -0.0642 | No | ||
149 | PFN1 | 1449018_at | 18106 | -0.254 | -0.0666 | No | ||
150 | FKBP10 | 1415951_at 1449632_s_at | 18143 | -0.258 | -0.0659 | No | ||
151 | CRMP1 | 1448289_at | 18170 | -0.262 | -0.0646 | No | ||
152 | CHD4 | 1436343_at 1438476_a_at 1451295_a_at | 18186 | -0.264 | -0.0628 | No | ||
153 | BTBD5 | 1428721_at 1453987_at | 18332 | -0.285 | -0.0668 | No | ||
154 | POGK | 1447864_s_at 1459896_at | 18358 | -0.288 | -0.0652 | No | ||
155 | FOXJ3 | 1435362_at 1438220_at 1459055_at | 18381 | -0.292 | -0.0635 | No | ||
156 | GPM6B | 1423091_a_at 1425942_a_at 1453514_at | 18449 | -0.300 | -0.0638 | No | ||
157 | MNT | 1418192_at | 18590 | -0.320 | -0.0672 | No | ||
158 | EWSR1 | 1417238_at 1425919_at 1436884_x_at 1441074_at 1456461_at | 18602 | -0.322 | -0.0647 | No | ||
159 | GADD45G | 1453851_a_at | 18657 | -0.330 | -0.0641 | No | ||
160 | OPRS1 | 1416750_at 1435579_at 1440792_x_at 1451956_a_at 1457324_at | 18693 | -0.335 | -0.0625 | No | ||
161 | WDR23 | 1448418_s_at 1460189_at | 18776 | -0.351 | -0.0630 | No | ||
162 | PER1 | 1449851_at | 18904 | -0.376 | -0.0653 | No | ||
163 | SRP72 | 1428876_at 1428877_at | 19089 | -0.414 | -0.0699 | No | ||
164 | TOP1 | 1423474_at 1438495_at 1457573_at 1459672_at | 19100 | -0.415 | -0.0664 | No | ||
165 | NRAS | 1422688_a_at 1454060_a_at | 19135 | -0.424 | -0.0640 | No | ||
166 | CDC14A | 1436913_at 1443184_at 1446493_at 1459517_at | 19137 | -0.425 | -0.0601 | No | ||
167 | USP34 | 1434392_at 1434393_at 1444437_at 1446112_at 1460126_at | 19253 | -0.452 | -0.0611 | No | ||
168 | SUCLG2 | 1427441_a_at 1435841_s_at 1444309_at | 19267 | -0.453 | -0.0575 | No | ||
169 | MXD4 | 1422574_at 1434378_a_at 1434379_at | 19275 | -0.455 | -0.0535 | No | ||
170 | TCOF1 | 1423600_a_at 1423601_s_at 1424643_at | 19906 | -0.624 | -0.0766 | No | ||
171 | SMAD2 | 1420634_a_at 1458304_at | 20011 | -0.663 | -0.0751 | No | ||
172 | H3F3A | 1423263_at 1442087_at | 20194 | -0.733 | -0.0766 | No | ||
173 | DIABLO | 1417683_at 1425768_at | 20432 | -0.839 | -0.0796 | No | ||
174 | ZHX2 | 1455210_at | 20574 | -0.905 | -0.0776 | No | ||
175 | RFX5 | 1423103_at | 20655 | -0.955 | -0.0723 | No | ||
176 | AMPD2 | 1426757_at 1438941_x_at | 20827 | -1.084 | -0.0700 | No | ||
177 | ISGF3G | 1421322_a_at | 20930 | -1.173 | -0.0637 | No | ||
178 | JMJD1A | 1426810_at | 21136 | -1.403 | -0.0599 | No | ||
179 | TUBA1 | 1418884_x_at | 21146 | -1.412 | -0.0471 | No | ||
180 | ARMET | 1428112_at 1459455_at | 21208 | -1.507 | -0.0357 | No | ||
181 | DIRC2 | 1454654_at 1457245_at | 21361 | -1.711 | -0.0266 | No | ||
182 | SLC43A1 | 1440007_at 1453255_at | 21398 | -1.787 | -0.0115 | No | ||
183 | ATF7IP | 1446323_at 1449192_at 1454973_at 1459096_at | 21411 | -1.823 | 0.0051 | No | ||
184 | RORC | 1425792_a_at 1425793_a_at | 21494 | -2.024 | 0.0203 | No |