Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | ATM_plus |
GeneSet | V$ELF1_Q6 |
Enrichment Score (ES) | -0.46531868 |
Normalized Enrichment Score (NES) | -1.5179536 |
Nominal p-value | 0.0020120724 |
FDR q-value | 0.18661049 |
FWER p-Value | 0.832 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | TLN1 | 1436042_at 1448402_at 1457782_at | 270 | 2.416 | 0.0121 | No | ||
2 | IQGAP1 | 1417379_at 1417380_at 1431395_a_at 1431396_at 1434998_at 1445724_at 1458124_at | 363 | 2.129 | 0.0294 | No | ||
3 | NRP1 | 1418084_at 1448943_at 1448944_at 1457198_at | 379 | 2.098 | 0.0499 | No | ||
4 | SUPT16H | 1419741_at 1449578_at 1456449_at | 449 | 1.937 | 0.0664 | No | ||
5 | INPP5F | 1433542_at 1442100_at 1447757_x_at | 489 | 1.842 | 0.0832 | No | ||
6 | EIF4EBP1 | 1417562_at 1417563_at 1434976_x_at | 583 | 1.660 | 0.0957 | No | ||
7 | FCER1G | 1418340_at | 768 | 1.376 | 0.1012 | No | ||
8 | CNOT6L | 1425480_at 1425481_at 1434311_at 1443595_at 1451723_at | 1032 | 1.118 | 0.1005 | No | ||
9 | LIMS1 | 1418230_a_at 1418231_at 1418232_s_at 1441411_at 1443947_at | 1126 | 1.041 | 0.1067 | No | ||
10 | PSME2 | 1417189_at | 1313 | 0.928 | 0.1076 | No | ||
11 | BIRC4 | 1421394_a_at 1426636_a_at 1437533_at 1440351_at 1450231_a_at 1450232_at 1456088_at | 1369 | 0.900 | 0.1142 | No | ||
12 | PUM1 | 1423117_at 1456054_a_at 1460325_at | 1597 | 0.794 | 0.1118 | No | ||
13 | ACSL5 | 1428082_at | 1845 | 0.691 | 0.1074 | No | ||
14 | VIM | 1438118_x_at 1450641_at 1456292_a_at | 1884 | 0.674 | 0.1125 | No | ||
15 | ELOVL1 | 1425676_a_at 1443820_x_at 1455994_x_at 1456530_x_at | 1889 | 0.671 | 0.1191 | No | ||
16 | RCL1 | 1416730_at 1457992_at | 1957 | 0.650 | 0.1226 | No | ||
17 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 2004 | 0.634 | 0.1269 | No | ||
18 | MSH5 | 1430771_a_at 1449537_at | 2385 | 0.534 | 0.1148 | No | ||
19 | RNF12 | 1417250_at 1418730_at 1418731_at 1439403_x_at 1440850_at 1443167_at | 2615 | 0.485 | 0.1092 | No | ||
20 | STAB1 | 1450199_a_at | 2652 | 0.478 | 0.1124 | No | ||
21 | C1QA | 1417381_at | 2871 | 0.439 | 0.1069 | No | ||
22 | TBC1D8 | 1416996_at 1445031_at 1455683_a_at | 3031 | 0.414 | 0.1037 | No | ||
23 | MYO1C | 1419648_at 1419649_s_at 1449550_at 1449551_at | 3172 | 0.392 | 0.1013 | No | ||
24 | DPP3 | 1431594_at 1448215_a_at | 3340 | 0.370 | 0.0974 | No | ||
25 | HOXB4 | 1451761_at 1460379_at | 3452 | 0.358 | 0.0959 | No | ||
26 | ANKRD28 | 1434630_at 1454801_at | 3455 | 0.357 | 0.0994 | No | ||
27 | FAM3D | 1424502_at | 4098 | 0.301 | 0.0729 | No | ||
28 | GPX1 | 1460671_at | 4159 | 0.297 | 0.0732 | No | ||
29 | ATP2A3 | 1421129_a_at 1450124_a_at | 4169 | 0.296 | 0.0758 | No | ||
30 | DMTF1 | 1422636_at 1440349_at 1456697_x_at | 4366 | 0.284 | 0.0697 | No | ||
31 | PRKRIP1 | 1417425_at 1442084_at 1442598_at | 4431 | 0.280 | 0.0695 | No | ||
32 | CDKN2A | 1450140_a_at | 4728 | 0.265 | 0.0586 | No | ||
33 | AKT1S1 | 1428158_at 1437736_at 1452684_at | 4744 | 0.264 | 0.0606 | No | ||
34 | CDH5 | 1422047_at 1433956_at | 4886 | 0.258 | 0.0567 | No | ||
35 | KCNAB1 | 1448468_a_at 1454043_a_at | 5055 | 0.250 | 0.0516 | No | ||
36 | MYL1 | 1452651_a_at | 5418 | 0.234 | 0.0373 | No | ||
37 | HOXC4 | 1422870_at | 5486 | 0.232 | 0.0366 | No | ||
38 | ERF | 1422114_at 1435561_at | 5583 | 0.228 | 0.0345 | No | ||
39 | TTC15 | 1427244_at 1440983_at 1441528_at 1442451_at 1457762_at 1459676_at | 5633 | 0.226 | 0.0345 | No | ||
40 | RAB39 | 1437762_at | 6023 | 0.211 | 0.0188 | No | ||
41 | E2F3 | 1427462_at 1434564_at | 6026 | 0.211 | 0.0208 | No | ||
42 | RASIP1 | 1428016_a_at | 6040 | 0.210 | 0.0224 | No | ||
43 | PI16 | 1422026_at 1440744_at 1453839_a_at | 6290 | 0.202 | 0.0130 | No | ||
44 | SHC3 | 1450326_at | 6309 | 0.201 | 0.0142 | No | ||
45 | FGF20 | 1421677_at | 6325 | 0.201 | 0.0155 | No | ||
46 | TWIST1 | 1418733_at | 7069 | 0.176 | -0.0168 | No | ||
47 | TSSC1 | 1436955_at 1441877_x_at 1445308_at | 7762 | 0.156 | -0.0471 | No | ||
48 | FUT11 | 1431066_at 1434123_at 1437748_at | 7836 | 0.153 | -0.0489 | No | ||
49 | PRDM5 | 1432057_a_at | 8590 | 0.134 | -0.0821 | No | ||
50 | SIX4 | 1425767_a_at 1427701_a_at 1439753_x_at 1456862_at | 8649 | 0.133 | -0.0834 | No | ||
51 | FBLN5 | 1416164_at 1446377_at | 8726 | 0.131 | -0.0856 | No | ||
52 | GNGT2 | 1428733_at | 9037 | 0.123 | -0.0986 | No | ||
53 | CENTA1 | 1433556_at | 9147 | 0.121 | -0.1024 | No | ||
54 | FZD10 | 1440182_at 1455689_at | 9349 | 0.115 | -0.1104 | No | ||
55 | TEK | 1418788_at 1444931_at | 9443 | 0.113 | -0.1136 | No | ||
56 | MICAL2 | 1438726_at 1455685_at | 9497 | 0.112 | -0.1149 | No | ||
57 | APOB48R | 1420382_at | 9927 | 0.101 | -0.1335 | No | ||
58 | RAB25 | 1417738_at | 9938 | 0.101 | -0.1330 | No | ||
59 | RPL17 | 1423855_x_at 1435791_x_at 1453752_at | 10526 | 0.088 | -0.1590 | No | ||
60 | DUSP22 | 1441723_at 1448985_at | 10659 | 0.085 | -0.1643 | No | ||
61 | MLLT7 | 1422149_at | 10891 | 0.079 | -0.1741 | No | ||
62 | RASGRP3 | 1438030_at 1438031_at | 11021 | 0.076 | -0.1792 | No | ||
63 | A2BP1 | 1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at | 11030 | 0.075 | -0.1788 | No | ||
64 | CAMK1D | 1426389_at 1438643_at 1452050_at | 11214 | 0.072 | -0.1865 | No | ||
65 | JARID2 | 1422698_s_at 1446082_at 1450710_at 1456661_at | 12069 | 0.051 | -0.2252 | No | ||
66 | HOXC10 | 1439798_at | 12336 | 0.045 | -0.2370 | No | ||
67 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 12344 | 0.045 | -0.2369 | No | ||
68 | KLF13 | 1432543_a_at 1456030_at | 12893 | 0.032 | -0.2617 | No | ||
69 | ORMDL3 | 1419450_at | 12960 | 0.030 | -0.2644 | No | ||
70 | ALOX5AP | 1452016_at 1459234_at | 12961 | 0.030 | -0.2641 | No | ||
71 | PCDH9 | 1439322_at 1442659_at 1444215_at 1444724_at 1445052_at 1445061_at 1457973_at | 12998 | 0.029 | -0.2655 | No | ||
72 | GPR120 | 1439489_at | 13062 | 0.027 | -0.2681 | No | ||
73 | LAMA3 | 1444860_at | 13094 | 0.027 | -0.2693 | No | ||
74 | SAMSN1 | 1421457_a_at 1431539_at | 13388 | 0.018 | -0.2825 | No | ||
75 | FGD2 | 1419515_at | 13410 | 0.018 | -0.2833 | No | ||
76 | NEURL2 | 1429141_at | 13433 | 0.017 | -0.2842 | No | ||
77 | KLF12 | 1439846_at 1439847_s_at 1441040_at 1455521_at | 13978 | 0.002 | -0.3091 | No | ||
78 | ITGB7 | 1418741_at | 14019 | 0.001 | -0.3110 | No | ||
79 | REL | 1420710_at | 14232 | -0.005 | -0.3207 | No | ||
80 | CTNND1 | 1422450_at 1437448_s_at 1445830_at | 14423 | -0.011 | -0.3293 | No | ||
81 | ELF4 | 1421337_at 1445778_at | 14548 | -0.015 | -0.3348 | No | ||
82 | NTS | 1422860_at | 14589 | -0.016 | -0.3365 | No | ||
83 | RUFY1 | 1434131_at 1447391_at 1457340_at | 14594 | -0.017 | -0.3365 | No | ||
84 | HM13 | 1417287_at 1428855_at 1428856_at 1438456_at 1438865_at 1455631_at | 14933 | -0.027 | -0.3518 | No | ||
85 | PSPN | 1450375_at | 15384 | -0.044 | -0.3720 | No | ||
86 | P2RY10 | 1452815_at | 15647 | -0.054 | -0.3835 | No | ||
87 | NCAM1 | 1421966_at 1425126_at 1426864_a_at 1426865_a_at 1439556_at 1440067_at 1441995_at 1442680_at 1443018_at 1450437_a_at 1450438_at 1454140_at | 15908 | -0.066 | -0.3947 | No | ||
88 | CSF1 | 1425154_a_at 1425155_x_at 1448914_a_at 1460220_a_at | 16294 | -0.085 | -0.4116 | No | ||
89 | TNFSF13 | 1445227_at | 16359 | -0.089 | -0.4136 | No | ||
90 | XPR1 | 1426053_a_at 1426992_at 1426993_at 1437958_at 1444168_at 1444267_at 1450130_at 1452271_at | 16817 | -0.120 | -0.4334 | No | ||
91 | SPRED2 | 1423001_at 1434403_at 1436892_at 1441415_at 1441802_at | 16850 | -0.122 | -0.4336 | No | ||
92 | MYADM | 1423321_at 1439389_s_at | 16934 | -0.128 | -0.4361 | No | ||
93 | IL7R | 1448575_at 1448576_at | 16982 | -0.133 | -0.4370 | No | ||
94 | GMIP | 1428784_at | 17213 | -0.153 | -0.4460 | No | ||
95 | PABPC1 | 1418883_a_at 1419500_at 1453840_at | 17229 | -0.154 | -0.4451 | No | ||
96 | DAPP1 | 1421936_at 1421937_at 1447337_at | 17236 | -0.155 | -0.4438 | No | ||
97 | ADD3 | 1423297_at 1423298_at 1426574_a_at 1447077_at 1456162_x_at | 17322 | -0.163 | -0.4461 | No | ||
98 | AIF1 | 1418204_s_at | 17325 | -0.164 | -0.4445 | No | ||
99 | SLC39A13 | 1423926_at | 17380 | -0.168 | -0.4453 | No | ||
100 | BAZ1A | 1433599_at 1447930_at | 17586 | -0.188 | -0.4528 | No | ||
101 | SF1 | 1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at | 17617 | -0.192 | -0.4522 | No | ||
102 | CLIC1 | 1416656_at 1458665_at | 17741 | -0.206 | -0.4558 | No | ||
103 | TBC1D17 | 1423659_a_at | 17755 | -0.208 | -0.4543 | No | ||
104 | MRPL24 | 1428709_a_at | 17789 | -0.211 | -0.4536 | No | ||
105 | TYROBP | 1450792_at | 17866 | -0.220 | -0.4549 | No | ||
106 | SNX2 | 1460224_at | 17941 | -0.229 | -0.4560 | No | ||
107 | MR1 | 1421898_a_at 1421899_a_at | 18014 | -0.241 | -0.4569 | No | ||
108 | CAMK2B | 1448676_at 1455869_at | 18040 | -0.244 | -0.4555 | No | ||
109 | BRAF | 1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at | 18093 | -0.251 | -0.4554 | No | ||
110 | RNF31 | 1455051_at | 18099 | -0.252 | -0.4531 | No | ||
111 | BAHD1 | 1433703_s_at | 18119 | -0.256 | -0.4513 | No | ||
112 | PFKFB4 | 1456888_at | 18289 | -0.280 | -0.4563 | No | ||
113 | RAC1 | 1423734_at 1437674_at 1451086_s_at | 18420 | -0.297 | -0.4592 | No | ||
114 | DGKZ | 1426738_at 1452169_a_at | 18427 | -0.297 | -0.4565 | No | ||
115 | MLLT3 | 1429205_at 1431890_a_at 1441535_at 1453622_s_at | 18511 | -0.307 | -0.4572 | No | ||
116 | ACSL4 | 1418911_s_at 1433531_at 1451828_a_at | 18565 | -0.316 | -0.4564 | No | ||
117 | MITF | 1422025_at 1455214_at | 18675 | -0.333 | -0.4581 | No | ||
118 | WAS | 1419631_at | 18685 | -0.334 | -0.4551 | No | ||
119 | DPP8 | 1428697_at 1431064_at 1445705_x_at | 18908 | -0.376 | -0.4615 | Yes | ||
120 | ITPR2 | 1421678_at 1424833_at 1424834_s_at 1427287_s_at 1427693_at 1444418_at 1444551_at 1447328_at | 18943 | -0.384 | -0.4592 | Yes | ||
121 | NCK1 | 1421487_a_at 1424543_at 1447271_at | 18972 | -0.389 | -0.4565 | Yes | ||
122 | GRB2 | 1418508_a_at 1449111_a_at | 18989 | -0.393 | -0.4533 | Yes | ||
123 | AGPAT1 | 1421024_at 1421025_at | 19030 | -0.401 | -0.4511 | Yes | ||
124 | CDC14A | 1436913_at 1443184_at 1446493_at 1459517_at | 19137 | -0.425 | -0.4516 | Yes | ||
125 | MAP3K11 | 1450669_at | 19151 | -0.429 | -0.4479 | Yes | ||
126 | CD37 | 1419206_at 1425736_at | 19166 | -0.432 | -0.4442 | Yes | ||
127 | STAT6 | 1421708_a_at 1426353_at | 19177 | -0.434 | -0.4402 | Yes | ||
128 | MARCKS | 1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at | 19202 | -0.439 | -0.4369 | Yes | ||
129 | VAV1 | 1422932_a_at | 19214 | -0.442 | -0.4329 | Yes | ||
130 | ARHGDIB | 1426454_at | 19261 | -0.452 | -0.4305 | Yes | ||
131 | CREB3 | 1419979_s_at 1424740_at 1424741_s_at | 19307 | -0.465 | -0.4278 | Yes | ||
132 | PITPNM1 | 1425760_a_at 1437724_x_at 1438854_x_at 1438974_x_at | 19375 | -0.480 | -0.4260 | Yes | ||
133 | RELA | 1419536_a_at | 19403 | -0.485 | -0.4224 | Yes | ||
134 | PLCB2 | 1452481_at | 19419 | -0.489 | -0.4181 | Yes | ||
135 | SDCCAG3 | 1429554_at 1431760_a_at 1453195_at 1456106_x_at | 19528 | -0.519 | -0.4178 | Yes | ||
136 | TM6SF1 | 1451353_at | 19618 | -0.543 | -0.4164 | Yes | ||
137 | CTCF | 1418330_at 1449042_at | 19751 | -0.580 | -0.4166 | Yes | ||
138 | LAG3 | 1449911_at | 19763 | -0.583 | -0.4112 | Yes | ||
139 | RNF5 | 1422888_at | 19954 | -0.642 | -0.4134 | Yes | ||
140 | DNAJA2 | 1417182_at 1417183_at 1429476_s_at 1457233_at | 19956 | -0.643 | -0.4070 | Yes | ||
141 | ARRB2 | 1426239_s_at 1451987_at | 20060 | -0.681 | -0.4048 | Yes | ||
142 | CALCRL | 1418489_a_at 1425814_a_at 1440685_at 1459536_at | 20141 | -0.711 | -0.4013 | Yes | ||
143 | MADD | 1425735_at 1455502_at | 20168 | -0.725 | -0.3951 | Yes | ||
144 | MTPN | 1420472_at 1420473_at 1420474_at 1420475_at 1437457_a_at 1459597_at | 20185 | -0.731 | -0.3885 | Yes | ||
145 | EDG6 | 1451024_at | 20295 | -0.778 | -0.3856 | Yes | ||
146 | CMAS | 1426662_at | 20444 | -0.844 | -0.3839 | Yes | ||
147 | SORL1 | 1426258_at 1445889_at 1453003_at 1460390_at | 20460 | -0.853 | -0.3759 | Yes | ||
148 | TLR4 | 1418162_at 1418163_at 1430695_at 1442827_at | 20546 | -0.891 | -0.3708 | Yes | ||
149 | PPP3CA | 1426401_at 1438478_a_at 1440051_at 1452056_s_at 1458495_at | 20580 | -0.908 | -0.3631 | Yes | ||
150 | KIF3C | 1434947_at 1448946_at | 20588 | -0.913 | -0.3542 | Yes | ||
151 | ABI3 | 1446191_at 1452928_at | 20625 | -0.934 | -0.3464 | Yes | ||
152 | NEDD4 | 1421955_a_at 1444044_at 1450431_a_at 1451109_a_at | 20897 | -1.145 | -0.3473 | Yes | ||
153 | PIK3CD | 1422991_at 1422992_s_at 1443798_at 1453281_at 1458321_at | 20914 | -1.159 | -0.3363 | Yes | ||
154 | CD79B | 1417640_at | 21072 | -1.317 | -0.3302 | Yes | ||
155 | STIM1 | 1436945_x_at 1448320_at 1458460_at | 21132 | -1.396 | -0.3187 | Yes | ||
156 | ELMO1 | 1424523_at 1446610_at 1450208_a_at | 21206 | -1.505 | -0.3068 | Yes | ||
157 | MAP4K2 | 1428297_at 1434833_at 1450244_a_at | 21264 | -1.570 | -0.2936 | Yes | ||
158 | SLC9A9 | 1433719_at 1437488_at 1447149_at | 21321 | -1.650 | -0.2794 | Yes | ||
159 | NFIA | 1421162_a_at 1421163_a_at 1427733_a_at 1438236_at 1440660_at 1441547_at 1446742_at 1446990_at 1456087_at 1459431_at | 21384 | -1.765 | -0.2644 | Yes | ||
160 | TXK | 1425785_a_at | 21497 | -2.030 | -0.2490 | Yes | ||
161 | ARPC2 | 1437148_at 1442295_at | 21570 | -2.196 | -0.2301 | Yes | ||
162 | CAPN3 | 1426043_a_at 1433681_x_at | 21625 | -2.358 | -0.2087 | Yes | ||
163 | NR2C2 | 1425014_at 1439696_at 1445613_at 1446955_at 1451569_at 1454167_at 1454851_at | 21642 | -2.428 | -0.1849 | Yes | ||
164 | IKBKB | 1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at | 21683 | -2.583 | -0.1605 | Yes | ||
165 | TGFB1 | 1420653_at 1445360_at | 21809 | -3.227 | -0.1336 | Yes | ||
166 | RALA | 1423137_at 1450870_at 1456049_at | 21821 | -3.291 | -0.1008 | Yes | ||
167 | PCQAP | 1441617_at 1444680_at 1444688_at 1448435_at | 21829 | -3.319 | -0.0675 | Yes | ||
168 | CREBBP | 1434633_at 1435224_at 1436983_at 1444856_at 1457641_at 1459804_at | 21856 | -3.508 | -0.0332 | Yes | ||
169 | PPGB | 1445659_at 1448128_at 1458466_at | 21873 | -3.640 | 0.0029 | Yes |