Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	V$E2F_Q6
Enrichment Score (ES)	0.4731825
Normalized Enrichment Score (NES)	1.5229795
Nominal p-value	0.0
FDR q-value	0.09793964
FWER p-Value	0.791

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	43	4.243	0.0344	Yes
2	SFRS7	1424033_at 1424883_s_at 1436871_at	46	4.236	0.0706	Yes
3	HNRPD	1425142_a_at 1446083_at	59	3.935	0.1038	Yes
4	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	92	3.541	0.1326	Yes
5	POLA2	1425794_at 1448369_at 1456713_at	144	3.131	0.1571	Yes
6	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	251	2.504	0.1737	Yes
7	NOLC1	1428869_at 1428870_at 1450087_a_at	258	2.467	0.1946	Yes
8	MCM6	1416251_at 1438852_x_at 1447756_x_at	280	2.372	0.2139	Yes
9	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	310	2.282	0.2322	Yes
10	CDT1	1424143_a_at 1424144_at 1455791_at	341	2.186	0.2495	Yes
11	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	376	2.102	0.2660	Yes
12	ACO2	1436934_s_at 1442102_at 1451002_at	402	2.038	0.2823	Yes
13	CDC6	1417019_a_at	622	1.567	0.2856	Yes
14	POLR2A	1422311_a_at 1426242_at 1458710_at	664	1.498	0.2966	Yes
15	UNG	1425753_a_at	734	1.410	0.3055	Yes
16	WEE1	1416773_at 1416774_at	753	1.388	0.3166	Yes
17	GMNN	1417506_at	766	1.376	0.3278	Yes
18	ATAD2	1436174_at 1443146_at 1443229_at	798	1.334	0.3378	Yes
19	RAD51	1418281_at	812	1.324	0.3486	Yes
20	SNRPD1	1416336_s_at	926	1.209	0.3538	Yes
21	TOPBP1	1452241_at 1458480_at	1029	1.121	0.3587	Yes
22	ATF5	1425927_a_at	1030	1.120	0.3683	Yes
23	CLSPN	1441984_at 1456280_at	1091	1.069	0.3747	Yes
24	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1092	1.069	0.3839	Yes
25	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	1164	1.017	0.3893	Yes
26	POLE2	1427094_at 1431440_at	1190	1.000	0.3967	Yes
27	POLD1	1448187_at 1456055_x_at	1223	0.980	0.4036	Yes
28	RASAL2	1436910_at 1444671_at	1298	0.934	0.4083	Yes
29	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	1357	0.910	0.4134	Yes
30	CDC45L	1416575_at 1457838_at	1397	0.889	0.4192	Yes
31	RANBP1	1422547_at	1425	0.874	0.4255	Yes
32	RQCD1	1450887_at	1563	0.810	0.4261	Yes
33	MXD3	1422970_at 1438847_at 1448878_at	1622	0.783	0.4302	Yes
34	PHF5A	1424170_at	1645	0.768	0.4357	Yes
35	SLC9A5	1420070_a_at 1455760_at	1759	0.718	0.4367	Yes
36	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	1778	0.711	0.4420	Yes
37	DNAJC9	1426473_at	1805	0.702	0.4468	Yes
38	UXT	1418986_a_at	1888	0.671	0.4488	Yes
39	MCM2	1434079_s_at 1448777_at	1953	0.651	0.4514	Yes
40	JPH1	1421520_at 1438428_at	1986	0.642	0.4554	Yes
41	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2004	0.634	0.4601	Yes
42	YBX2	1420762_a_at	2026	0.628	0.4645	Yes
43	RRM2	1416120_at 1434437_x_at 1448226_at	2066	0.615	0.4680	Yes
44	E2F7	1437187_at	2153	0.591	0.4691	Yes
45	INSM1	1421399_at 1455865_at	2184	0.583	0.4727	Yes
46	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2279	0.560	0.4732	Yes
47	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2458	0.516	0.4694	No
48	MRPL40	1448849_at	2546	0.499	0.4697	No
49	ILF3	1422546_at 1436802_at 1460669_at	2570	0.492	0.4729	No
50	PCSK1	1421396_at	2937	0.428	0.4597	No
51	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	2967	0.425	0.4620	No
52	NELL2	1423560_at 1423561_at	3000	0.421	0.4642	No
53	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	3033	0.413	0.4663	No
54	SYNGR4	1418875_at	3049	0.410	0.4691	No
55	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	3095	0.403	0.4705	No
56	PRPS1	1416052_at	3171	0.392	0.4704	No
57	AK2	1448450_at 1448451_at	3259	0.380	0.4696	No
58	TYRO3	1425248_a_at 1425249_a_at	3303	0.375	0.4709	No
59	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	3439	0.358	0.4677	No
60	MCM8	1429557_at	3676	0.335	0.4598	No
61	EPHB1	1455188_at	4191	0.295	0.4387	No
62	ZBTB4	1429722_at 1460488_at	4473	0.277	0.4282	No
63	PAQR4	1423101_at	4481	0.277	0.4302	No
64	PKMYT1	1418481_at 1438601_at	4550	0.273	0.4294	No
65	STMN1	1415849_s_at	4880	0.258	0.4165	No
66	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	5173	0.245	0.4052	No
67	H2AFZ	1441370_at	5496	0.231	0.3924	No
68	FHOD1	1435557_at	5614	0.227	0.3890	No
69	DNAJC5G	1437814_at	5670	0.225	0.3884	No
70	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	5694	0.224	0.3893	No
71	STK35	1431107_at 1439802_at	5726	0.223	0.3897	No
72	HMGN2	1433507_a_at	5868	0.217	0.3851	No
73	E2F3	1427462_at 1434564_at	6026	0.211	0.3797	No
74	MCM4	1416214_at 1436708_x_at	6049	0.210	0.3805	No
75	TREX2	1449367_at	6129	0.207	0.3787	No
76	HS6ST3	1421599_at	6502	0.195	0.3633	No
77	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	6643	0.190	0.3584	No
78	CORT	1449820_at	6992	0.179	0.3440	No
79	PCNA	1417947_at	7044	0.177	0.3432	No
80	RAVER1	1427110_at 1427111_s_at 1444966_at	7164	0.174	0.3392	No
81	AP4M1	1418846_at	7271	0.170	0.3358	No
82	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	7333	0.169	0.3344	No
83	E2F1	1417878_at 1431875_a_at 1447840_x_at	7608	0.160	0.3232	No
84	KCNA6	1421568_at 1441049_at 1456954_at	7776	0.155	0.3169	No
85	MYH10	1441057_at 1452740_at	8799	0.129	0.2711	No
86	SEMA6A	1421414_a_at 1425903_at 1436458_at	8935	0.126	0.2659	No
87	RHD	1417049_at	9360	0.115	0.2474	No
88	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	9716	0.107	0.2321	No
89	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9766	0.105	0.2307	No
90	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	10079	0.098	0.2172	No
91	HNRPR	1427129_a_at 1438807_at 1452030_a_at	10304	0.093	0.2077	No
92	SLC6A4	1417150_at	10397	0.091	0.2043	No
93	GABRB3	1421189_at 1421190_at 1435021_at	10900	0.079	0.1819	No
94	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11648	0.062	0.1481	No
95	MAZ	1427099_at	11861	0.056	0.1389	No
96	PHF15	1430081_at 1455345_at	12053	0.051	0.1305	No
97	HOXC10	1439798_at	12336	0.045	0.1180	No
98	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	12344	0.045	0.1180	No
99	ARHGAP11A	1438434_at	12759	0.035	0.0993	No
100	UFD1L	1418087_at 1432367_a_at	12812	0.034	0.0972	No
101	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12965	0.030	0.0905	No
102	ACBD6	1452601_a_at 1453199_at	13205	0.024	0.0797	No
103	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	13468	0.016	0.0678	No
104	IPO7	1442511_at 1454955_at 1458165_at	13685	0.010	0.0580	No
105	PODN	1435180_at	14260	-0.006	0.0317	No
106	DDX17	1437773_x_at 1439037_at 1452155_a_at	14403	-0.011	0.0253	No
107	MSH2	1416988_at 1447888_x_at	15440	-0.046	-0.0219	No
108	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	15467	-0.047	-0.0227	No
109	FMO4	1425799_at 1444852_at	15487	-0.048	-0.0232	No
110	SLC38A1	1415903_at 1454764_s_at	15762	-0.059	-0.0353	No
111	PHF13	1455175_at	16417	-0.093	-0.0645	No
112	CASP8AP2	1449217_at	16429	-0.094	-0.0642	No
113	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16449	-0.095	-0.0643	No
114	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	16459	-0.096	-0.0639	No
115	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16751	-0.116	-0.0762	No
116	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	16864	-0.123	-0.0803	No
117	NRP2	1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at	16937	-0.129	-0.0825	No
118	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17244	-0.156	-0.0952	No
119	PRKDC	1451576_at	17327	-0.164	-0.0976	No
120	GPRC5B	1424613_at 1451411_at	17333	-0.164	-0.0964	No
121	CCNT1	1419313_at 1456477_at	17385	-0.169	-0.0973	No
122	EED	1448653_at	17478	-0.178	-0.1000	No
123	HCN3	1451023_at	17698	-0.200	-0.1083	No
124	NUP153	1441689_at 1441733_s_at 1452176_at	17817	-0.214	-0.1119	No
125	FBXO5	1429499_at	17869	-0.220	-0.1124	No
126	EZH2	1416544_at 1444263_at	17898	-0.223	-0.1118	No
127	USP37	1434242_at 1438212_at	18018	-0.241	-0.1152	No
128	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	18233	-0.271	-0.1227	No
129	USP52	1426700_a_at	18283	-0.280	-0.1225	No
130	BRMS1L	1452850_s_at 1460443_at	18343	-0.286	-0.1228	No
131	PPM1D	1434142_at 1449092_at 1459069_at	18374	-0.291	-0.1217	No
132	CDC25A	1417131_at 1417132_at 1445995_at	18425	-0.297	-0.1214	No
133	TBX6	1449868_at	18581	-0.319	-0.1258	No
134	PHC1	1423212_at	18618	-0.325	-0.1247	No
135	ALDH6A1	1448104_at	18695	-0.335	-0.1253	No
136	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18697	-0.335	-0.1225	No
137	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	18750	-0.345	-0.1219	No
138	HNRPUL1	1451984_at	18773	-0.350	-0.1199	No
139	ADAMTS2	1435990_at 1455720_at 1457058_at	18967	-0.388	-0.1254	No
140	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	19279	-0.456	-0.1358	No
141	DDB2	1425706_a_at 1436680_s_at	19308	-0.465	-0.1331	No
142	IL4I1	1419192_at	19449	-0.495	-0.1353	No
143	UGCGL1	1432318_at 1448009_at 1455839_at	19503	-0.512	-0.1334	No
144	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	19530	-0.519	-0.1301	No
145	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	19582	-0.533	-0.1279	No
146	CTCF	1418330_at 1449042_at	19751	-0.580	-0.1306	No
147	PIM1	1423006_at 1435458_at	19899	-0.622	-0.1320	No
148	SP3	1431804_a_at 1459360_at	20191	-0.732	-0.1391	No
149	STAG2	1421849_at 1450396_at	20247	-0.758	-0.1352	No
150	PPP1CC	1440594_at	20391	-0.821	-0.1347	No
151	RAB11B	1423448_at	20399	-0.825	-0.1279	No
152	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	20469	-0.858	-0.1238	No
153	PPP1R8	1424554_at 1435821_s_at	21012	-1.255	-0.1379	No
154	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	21105	-1.362	-0.1305	No
155	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21284	-1.599	-0.1249	No
156	SLCO3A1	1418030_at 1434537_at 1448918_at	21456	-1.925	-0.1163	No
157	MCM3	1420029_at 1426653_at	21483	-1.983	-0.1005	No
158	ARID4A	1436191_at 1438464_at 1456420_at	21524	-2.082	-0.0845	No
159	KBTBD7	1428192_at 1439865_at 1452700_s_at	21583	-2.218	-0.0681	No
160	ZCCHC8	1423755_at 1441639_at	21773	-2.986	-0.0512	No
161	ID3	1416630_at	21780	-3.031	-0.0255	No
162	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	21885	-3.812	0.0023	No