Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | SCID |
GeneSet | V$E2F_Q4 |
Enrichment Score (ES) | 0.48026517 |
Normalized Enrichment Score (NES) | 1.5607266 |
Nominal p-value | 0.0 |
FDR q-value | 0.15316433 |
FWER p-Value | 0.647 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | CDCA7 | 1428069_at 1445681_at | 43 | 4.243 | 0.0332 | Yes | ||
2 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 46 | 4.236 | 0.0683 | Yes | ||
3 | HNRPD | 1425142_a_at 1446083_at | 59 | 3.935 | 0.1004 | Yes | ||
4 | HNRPA1 | 1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at | 92 | 3.541 | 0.1283 | Yes | ||
5 | POLA2 | 1425794_at 1448369_at 1456713_at | 144 | 3.131 | 0.1520 | Yes | ||
6 | EPC1 | 1418850_at 1429914_at 1440198_at 1440742_at 1442279_at 1443675_at 1458315_at | 167 | 3.023 | 0.1761 | Yes | ||
7 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 251 | 2.504 | 0.1930 | Yes | ||
8 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 258 | 2.467 | 0.2132 | Yes | ||
9 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 280 | 2.372 | 0.2320 | Yes | ||
10 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 310 | 2.282 | 0.2496 | Yes | ||
11 | CDT1 | 1424143_a_at 1424144_at 1455791_at | 341 | 2.186 | 0.2663 | Yes | ||
12 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 376 | 2.102 | 0.2822 | Yes | ||
13 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 402 | 2.038 | 0.2980 | Yes | ||
14 | CDC6 | 1417019_a_at | 622 | 1.567 | 0.3010 | Yes | ||
15 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 664 | 1.498 | 0.3115 | Yes | ||
16 | UNG | 1425753_a_at | 734 | 1.410 | 0.3200 | Yes | ||
17 | WEE1 | 1416773_at 1416774_at | 753 | 1.388 | 0.3307 | Yes | ||
18 | GMNN | 1417506_at | 766 | 1.376 | 0.3416 | Yes | ||
19 | ATAD2 | 1436174_at 1443146_at 1443229_at | 798 | 1.334 | 0.3513 | Yes | ||
20 | RAD51 | 1418281_at | 812 | 1.324 | 0.3617 | Yes | ||
21 | SNRPD1 | 1416336_s_at | 926 | 1.209 | 0.3665 | Yes | ||
22 | TOPBP1 | 1452241_at 1458480_at | 1029 | 1.121 | 0.3711 | Yes | ||
23 | ATF5 | 1425927_a_at | 1030 | 1.120 | 0.3804 | Yes | ||
24 | CLSPN | 1441984_at 1456280_at | 1091 | 1.069 | 0.3865 | Yes | ||
25 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1092 | 1.069 | 0.3954 | Yes | ||
26 | SEMA5A | 1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at | 1164 | 1.017 | 0.4006 | Yes | ||
27 | POLE2 | 1427094_at 1431440_at | 1190 | 1.000 | 0.4077 | Yes | ||
28 | POLD1 | 1448187_at 1456055_x_at | 1223 | 0.980 | 0.4144 | Yes | ||
29 | RASAL2 | 1436910_at 1444671_at | 1298 | 0.934 | 0.4188 | Yes | ||
30 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 1357 | 0.910 | 0.4237 | Yes | ||
31 | CDC45L | 1416575_at 1457838_at | 1397 | 0.889 | 0.4292 | Yes | ||
32 | RANBP1 | 1422547_at | 1425 | 0.874 | 0.4353 | Yes | ||
33 | RQCD1 | 1450887_at | 1563 | 0.810 | 0.4357 | Yes | ||
34 | MXD3 | 1422970_at 1438847_at 1448878_at | 1622 | 0.783 | 0.4395 | Yes | ||
35 | PHF5A | 1424170_at | 1645 | 0.768 | 0.4449 | Yes | ||
36 | SLC9A5 | 1420070_a_at 1455760_at | 1759 | 0.718 | 0.4456 | Yes | ||
37 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 1778 | 0.711 | 0.4507 | Yes | ||
38 | DNAJC9 | 1426473_at | 1805 | 0.702 | 0.4554 | Yes | ||
39 | UXT | 1418986_a_at | 1888 | 0.671 | 0.4572 | Yes | ||
40 | MCM2 | 1434079_s_at 1448777_at | 1953 | 0.651 | 0.4596 | Yes | ||
41 | JPH1 | 1421520_at 1438428_at | 1986 | 0.642 | 0.4635 | Yes | ||
42 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 2004 | 0.634 | 0.4680 | Yes | ||
43 | YBX2 | 1420762_a_at | 2026 | 0.628 | 0.4722 | Yes | ||
44 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 2066 | 0.615 | 0.4755 | Yes | ||
45 | E2F7 | 1437187_at | 2153 | 0.591 | 0.4765 | Yes | ||
46 | INSM1 | 1421399_at 1455865_at | 2184 | 0.583 | 0.4799 | Yes | ||
47 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 2279 | 0.560 | 0.4803 | Yes | ||
48 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 2458 | 0.516 | 0.4764 | No | ||
49 | MRPL40 | 1448849_at | 2546 | 0.499 | 0.4765 | No | ||
50 | ILF3 | 1422546_at 1436802_at 1460669_at | 2570 | 0.492 | 0.4795 | No | ||
51 | PCSK1 | 1421396_at | 2937 | 0.428 | 0.4663 | No | ||
52 | PVRL1 | 1438111_at 1438421_at 1440131_at 1446488_at 1450819_at | 2967 | 0.425 | 0.4685 | No | ||
53 | NELL2 | 1423560_at 1423561_at | 3000 | 0.421 | 0.4705 | No | ||
54 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 3033 | 0.413 | 0.4725 | No | ||
55 | SYNGR4 | 1418875_at | 3049 | 0.410 | 0.4752 | No | ||
56 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 3095 | 0.403 | 0.4765 | No | ||
57 | PRPS1 | 1416052_at | 3171 | 0.392 | 0.4763 | No | ||
58 | AK2 | 1448450_at 1448451_at | 3259 | 0.380 | 0.4754 | No | ||
59 | TYRO3 | 1425248_a_at 1425249_a_at | 3303 | 0.375 | 0.4766 | No | ||
60 | DNAJC11 | 1433880_at 1433881_at 1439763_at 1446686_at 1447055_at | 3439 | 0.358 | 0.4733 | No | ||
61 | MCM8 | 1429557_at | 3676 | 0.335 | 0.4653 | No | ||
62 | EPHB1 | 1455188_at | 4191 | 0.295 | 0.4441 | No | ||
63 | ZBTB4 | 1429722_at 1460488_at | 4473 | 0.277 | 0.4335 | No | ||
64 | PAQR4 | 1423101_at | 4481 | 0.277 | 0.4355 | No | ||
65 | PKMYT1 | 1418481_at 1438601_at | 4550 | 0.273 | 0.4346 | No | ||
66 | STMN1 | 1415849_s_at | 4880 | 0.258 | 0.4217 | No | ||
67 | ERBB2IP | 1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at | 5173 | 0.245 | 0.4103 | No | ||
68 | H2AFZ | 1441370_at | 5496 | 0.231 | 0.3974 | No | ||
69 | FHOD1 | 1435557_at | 5614 | 0.227 | 0.3939 | No | ||
70 | DNAJC5G | 1437814_at | 5670 | 0.225 | 0.3933 | No | ||
71 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 5694 | 0.224 | 0.3941 | No | ||
72 | STK35 | 1431107_at 1439802_at | 5726 | 0.223 | 0.3945 | No | ||
73 | HMGN2 | 1433507_a_at | 5868 | 0.217 | 0.3898 | No | ||
74 | E2F3 | 1427462_at 1434564_at | 6026 | 0.211 | 0.3844 | No | ||
75 | MCM4 | 1416214_at 1436708_x_at | 6049 | 0.210 | 0.3851 | No | ||
76 | TREX2 | 1449367_at | 6129 | 0.207 | 0.3832 | No | ||
77 | HS6ST3 | 1421599_at | 6502 | 0.195 | 0.3677 | No | ||
78 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 6643 | 0.190 | 0.3629 | No | ||
79 | CORT | 1449820_at | 6992 | 0.179 | 0.3484 | No | ||
80 | PCNA | 1417947_at | 7044 | 0.177 | 0.3475 | No | ||
81 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 7164 | 0.174 | 0.3435 | No | ||
82 | AP4M1 | 1418846_at | 7271 | 0.170 | 0.3400 | No | ||
83 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 7333 | 0.169 | 0.3386 | No | ||
84 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 7608 | 0.160 | 0.3274 | No | ||
85 | KCNA6 | 1421568_at 1441049_at 1456954_at | 7776 | 0.155 | 0.3210 | No | ||
86 | MYH10 | 1441057_at 1452740_at | 8799 | 0.129 | 0.2751 | No | ||
87 | RHD | 1417049_at | 9360 | 0.115 | 0.2503 | No | ||
88 | WNT3 | 1450763_x_at | 9598 | 0.109 | 0.2404 | No | ||
89 | CTNND2 | 1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at | 9716 | 0.107 | 0.2359 | No | ||
90 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 9766 | 0.105 | 0.2345 | No | ||
91 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 10079 | 0.098 | 0.2210 | No | ||
92 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 10304 | 0.093 | 0.2115 | No | ||
93 | SLC6A4 | 1417150_at | 10397 | 0.091 | 0.2080 | No | ||
94 | GABRB3 | 1421189_at 1421190_at 1435021_at | 10900 | 0.079 | 0.1856 | No | ||
95 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 11648 | 0.062 | 0.1518 | No | ||
96 | MAZ | 1427099_at | 11861 | 0.056 | 0.1425 | No | ||
97 | PHF15 | 1430081_at 1455345_at | 12053 | 0.051 | 0.1342 | No | ||
98 | HOXC10 | 1439798_at | 12336 | 0.045 | 0.1216 | No | ||
99 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 12344 | 0.045 | 0.1216 | No | ||
100 | ARHGAP11A | 1438434_at | 12759 | 0.035 | 0.1029 | No | ||
101 | UFD1L | 1418087_at 1432367_a_at | 12812 | 0.034 | 0.1008 | No | ||
102 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 12965 | 0.030 | 0.0941 | No | ||
103 | ACBD6 | 1452601_a_at 1453199_at | 13205 | 0.024 | 0.0833 | No | ||
104 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 13468 | 0.016 | 0.0714 | No | ||
105 | IPO7 | 1442511_at 1454955_at 1458165_at | 13685 | 0.010 | 0.0615 | No | ||
106 | CHD2 | 1444246_at 1445843_at | 14051 | 0.000 | 0.0448 | No | ||
107 | PODN | 1435180_at | 14260 | -0.006 | 0.0353 | No | ||
108 | DDX17 | 1437773_x_at 1439037_at 1452155_a_at | 14403 | -0.011 | 0.0288 | No | ||
109 | MSH2 | 1416988_at 1447888_x_at | 15440 | -0.046 | -0.0184 | No | ||
110 | KCND2 | 1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at | 15467 | -0.047 | -0.0192 | No | ||
111 | FMO4 | 1425799_at 1444852_at | 15487 | -0.048 | -0.0196 | No | ||
112 | CRK | 1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at | 15694 | -0.056 | -0.0286 | No | ||
113 | SLC38A1 | 1415903_at 1454764_s_at | 15762 | -0.059 | -0.0312 | No | ||
114 | PHF13 | 1455175_at | 16417 | -0.093 | -0.0605 | No | ||
115 | CASP8AP2 | 1449217_at | 16429 | -0.094 | -0.0602 | No | ||
116 | WHSC1L1 | 1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at | 16449 | -0.095 | -0.0603 | No | ||
117 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 16459 | -0.096 | -0.0599 | No | ||
118 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 16751 | -0.116 | -0.0723 | No | ||
119 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 16864 | -0.123 | -0.0764 | No | ||
120 | NRP2 | 1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at | 16937 | -0.129 | -0.0787 | No | ||
121 | CBX5 | 1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at | 17244 | -0.156 | -0.0914 | No | ||
122 | PRKDC | 1451576_at | 17327 | -0.164 | -0.0939 | No | ||
123 | GPRC5B | 1424613_at 1451411_at | 17333 | -0.164 | -0.0927 | No | ||
124 | CCNT1 | 1419313_at 1456477_at | 17385 | -0.169 | -0.0937 | No | ||
125 | EED | 1448653_at | 17478 | -0.178 | -0.0964 | No | ||
126 | HCN3 | 1451023_at | 17698 | -0.200 | -0.1048 | No | ||
127 | NUP153 | 1441689_at 1441733_s_at 1452176_at | 17817 | -0.214 | -0.1084 | No | ||
128 | FBXO5 | 1429499_at | 17869 | -0.220 | -0.1090 | No | ||
129 | EZH2 | 1416544_at 1444263_at | 17898 | -0.223 | -0.1084 | No | ||
130 | USP37 | 1434242_at 1438212_at | 18018 | -0.241 | -0.1118 | No | ||
131 | SFRS12 | 1427134_at 1427135_at 1427136_s_at 1458056_at | 18233 | -0.271 | -0.1194 | No | ||
132 | USP52 | 1426700_a_at | 18283 | -0.280 | -0.1194 | No | ||
133 | BRMS1L | 1452850_s_at 1460443_at | 18343 | -0.286 | -0.1197 | No | ||
134 | PPM1D | 1434142_at 1449092_at 1459069_at | 18374 | -0.291 | -0.1187 | No | ||
135 | CDC25A | 1417131_at 1417132_at 1445995_at | 18425 | -0.297 | -0.1185 | No | ||
136 | TBX6 | 1449868_at | 18581 | -0.319 | -0.1230 | No | ||
137 | PHC1 | 1423212_at | 18618 | -0.325 | -0.1219 | No | ||
138 | ALDH6A1 | 1448104_at | 18695 | -0.335 | -0.1226 | No | ||
139 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 18697 | -0.335 | -0.1199 | No | ||
140 | HNRPUL1 | 1451984_at | 18773 | -0.350 | -0.1204 | No | ||
141 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 18967 | -0.388 | -0.1261 | No | ||
142 | KPNB1 | 1416925_at 1434357_a_at 1448526_at 1451967_x_at | 19279 | -0.456 | -0.1366 | No | ||
143 | DDB2 | 1425706_a_at 1436680_s_at | 19308 | -0.465 | -0.1340 | No | ||
144 | IL4I1 | 1419192_at | 19449 | -0.495 | -0.1363 | No | ||
145 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 19503 | -0.512 | -0.1345 | No | ||
146 | SFRS2 | 1415807_s_at 1427504_s_at 1427816_at 1452439_s_at | 19530 | -0.519 | -0.1314 | No | ||
147 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 19582 | -0.533 | -0.1293 | No | ||
148 | CTCF | 1418330_at 1449042_at | 19751 | -0.580 | -0.1322 | No | ||
149 | PIM1 | 1423006_at 1435458_at | 19899 | -0.622 | -0.1338 | No | ||
150 | SP3 | 1431804_a_at 1459360_at | 20191 | -0.732 | -0.1411 | No | ||
151 | STAG2 | 1421849_at 1450396_at | 20247 | -0.758 | -0.1373 | No | ||
152 | PPP1CC | 1440594_at | 20391 | -0.821 | -0.1371 | No | ||
153 | RAB11B | 1423448_at | 20399 | -0.825 | -0.1305 | No | ||
154 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 20469 | -0.858 | -0.1266 | No | ||
155 | ABI2 | 1433985_at 1436984_at 1444783_at 1458053_at 1460153_at | 20791 | -1.058 | -0.1326 | No | ||
156 | PPP1R8 | 1424554_at 1435821_s_at | 21012 | -1.255 | -0.1323 | No | ||
157 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 21105 | -1.362 | -0.1252 | No | ||
158 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 21284 | -1.599 | -0.1201 | No | ||
159 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 21456 | -1.925 | -0.1120 | No | ||
160 | MCM3 | 1420029_at 1426653_at | 21483 | -1.983 | -0.0967 | No | ||
161 | ARID4A | 1436191_at 1438464_at 1456420_at | 21524 | -2.082 | -0.0812 | No | ||
162 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21583 | -2.218 | -0.0655 | No | ||
163 | ZCCHC8 | 1423755_at 1441639_at | 21773 | -2.986 | -0.0494 | No | ||
164 | ID3 | 1416630_at | 21780 | -3.031 | -0.0245 | No | ||
165 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 21885 | -3.812 | 0.0023 | No |