Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	V$E2F_03
Enrichment Score (ES)	0.47234514
Normalized Enrichment Score (NES)	1.5408493
Nominal p-value	0.004132231
FDR q-value	0.12114705
FWER p-Value	0.726

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	43	4.243	0.0303	Yes
2	HNRPD	1425142_a_at 1446083_at	59	3.935	0.0595	Yes
3	BMP7	1418910_at 1432410_a_at	68	3.772	0.0879	Yes
4	EIF2S1	1440272_at 1452662_a_at	91	3.569	0.1140	Yes
5	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	92	3.541	0.1409	Yes
6	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	110	3.370	0.1658	Yes
7	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	124	3.275	0.1901	Yes
8	POLA2	1425794_at 1448369_at 1456713_at	144	3.131	0.2130	Yes
9	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	189	2.899	0.2331	Yes
10	MCM6	1416251_at 1438852_x_at 1447756_x_at	280	2.372	0.2470	Yes
11	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	310	2.282	0.2630	Yes
12	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	376	2.102	0.2760	Yes
13	KCTD15	1435339_at	520	1.779	0.2829	Yes
14	CDC6	1417019_a_at	622	1.567	0.2902	Yes
15	LGALS1	1419573_a_at 1455439_a_at	653	1.518	0.3004	Yes
16	CDKN1A	1421679_a_at 1424638_at	689	1.463	0.3099	Yes
17	UNG	1425753_a_at	734	1.410	0.3186	Yes
18	NRIP3	1418104_at 1431597_a_at 1448954_at	748	1.401	0.3287	Yes
19	GMNN	1417506_at	766	1.376	0.3384	Yes
20	ATAD2	1436174_at 1443146_at 1443229_at	798	1.334	0.3471	Yes
21	RAD51	1418281_at	812	1.324	0.3566	Yes
22	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	841	1.285	0.3651	Yes
23	LIG1	1416641_at	921	1.215	0.3707	Yes
24	TIAM1	1418057_at 1444373_at 1453887_a_at	931	1.207	0.3794	Yes
25	TOPBP1	1452241_at 1458480_at	1029	1.121	0.3835	Yes
26	MYC	1424942_a_at	1043	1.111	0.3914	Yes
27	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	1062	1.091	0.3988	Yes
28	MELK	1416558_at	1134	1.036	0.4034	Yes
29	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	1164	1.017	0.4098	Yes
30	POLD1	1448187_at 1456055_x_at	1223	0.980	0.4146	Yes
31	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	1227	0.977	0.4219	Yes
32	RPA2	1416433_at 1454011_a_at	1307	0.930	0.4254	Yes
33	CDC45L	1416575_at 1457838_at	1397	0.889	0.4280	Yes
34	RANBP1	1422547_at	1425	0.874	0.4334	Yes
35	PPRC1	1426381_at	1520	0.834	0.4355	Yes
36	MXD3	1422970_at 1438847_at 1448878_at	1622	0.783	0.4368	Yes
37	RCOR2	1417302_at	1627	0.779	0.4425	Yes
38	ANP32A	1421918_at 1434555_at 1450407_a_at	1702	0.739	0.4447	Yes
39	ORC1L	1422663_at 1443172_at	1723	0.732	0.4494	Yes
40	MRPL18	1448373_at	1782	0.710	0.4521	Yes
41	DNAJC9	1426473_at	1805	0.702	0.4565	Yes
42	UXT	1418986_a_at	1888	0.671	0.4578	Yes
43	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	1914	0.664	0.4617	Yes
44	MCM2	1434079_s_at 1448777_at	1953	0.651	0.4649	Yes
45	JPH1	1421520_at 1438428_at	1986	0.642	0.4683	Yes
46	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2004	0.634	0.4723	Yes
47	E2F7	1437187_at	2153	0.591	0.4700	No
48	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2279	0.560	0.4686	No
49	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	2351	0.541	0.4694	No
50	PCSK4	1425824_a_at	2487	0.511	0.4671	No
51	SLBP	1430058_at 1460168_at	2536	0.501	0.4687	No
52	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	2608	0.486	0.4691	No
53	PCSK1	1421396_at	2937	0.428	0.4573	No
54	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	2967	0.425	0.4592	No
55	PRPS1	1416052_at	3171	0.392	0.4529	No
56	AK2	1448450_at 1448451_at	3259	0.380	0.4518	No
57	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	3439	0.358	0.4463	No
58	RET	1421359_at	3616	0.340	0.4408	No
59	EPHB1	1455188_at	4191	0.295	0.4166	No
60	ZIM2	1432297_at	4350	0.285	0.4116	No
61	ANP32E	1420592_a_at 1447680_at	4400	0.281	0.4114	No
62	PAQR4	1423101_at	4481	0.277	0.4099	No
63	PKMYT1	1418481_at 1438601_at	4550	0.273	0.4088	No
64	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	4617	0.271	0.4078	No
65	SLITRK3	1439250_at	4623	0.270	0.4097	No
66	STMN1	1415849_s_at	4880	0.258	0.3999	No
67	H2AFZ	1441370_at	5496	0.231	0.3734	No
68	KLHDC3	1415991_a_at 1448164_at 1454747_a_at 1455910_at	5531	0.230	0.3736	No
69	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	5694	0.224	0.3678	No
70	HMGN2	1433507_a_at	5868	0.217	0.3615	No
71	E2F3	1427462_at 1434564_at	6026	0.211	0.3559	No
72	MCM4	1416214_at 1436708_x_at	6049	0.210	0.3565	No
73	TREX2	1449367_at	6129	0.207	0.3545	No
74	RPL28	1416074_a_at	6426	0.197	0.3424	No
75	DCLRE1A	1417904_at 1432097_a_at 1442329_at	6585	0.192	0.3366	No
76	GLRA3	1450239_at	7024	0.178	0.3178	No
77	AP4M1	1418846_at	7271	0.170	0.3078	No
78	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	7333	0.169	0.3063	No
79	E2F1	1417878_at 1431875_a_at 1447840_x_at	7608	0.160	0.2949	No
80	KCNA6	1421568_at 1441049_at 1456954_at	7776	0.155	0.2884	No
81	PRKCSH	1416339_a_at	8567	0.135	0.2531	No
82	CACNA1G	1423365_at	8932	0.126	0.2374	No
83	KNTC1	1435575_at	9004	0.124	0.2350	No
84	PPP1R9B	1447247_at 1447486_at	9214	0.119	0.2263	No
85	RHD	1417049_at	9360	0.115	0.2205	No
86	FANCG	1420960_at	9663	0.108	0.2075	No
87	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9766	0.105	0.2036	No
88	PDGFRA	1421916_at 1421917_at 1438946_at	9899	0.102	0.1983	No
89	DMC1	1420335_at 1449819_at	10196	0.095	0.1854	No
90	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	10211	0.095	0.1855	No
91	RPS20	1456373_x_at 1456436_x_at	10317	0.093	0.1814	No
92	A2BP1	1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at	11030	0.075	0.1492	No
93	SLC16A2	1418446_at	11134	0.073	0.1451	No
94	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	11168	0.073	0.1441	No
95	DLL4	1421826_at 1421827_at	11250	0.071	0.1409	No
96	MAZ	1427099_at	11861	0.056	0.1133	No
97	REPS2	1435389_at 1446652_at	11974	0.053	0.1086	No
98	PHF15	1430081_at 1455345_at	12053	0.051	0.1054	No
99	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	12258	0.046	0.0964	No
100	UFD1L	1418087_at 1432367_a_at	12812	0.034	0.0712	No
101	PTMA	1423455_at	12819	0.034	0.0712	No
102	EVI1	1423011_at 1438325_at	12919	0.031	0.0669	No
103	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12965	0.030	0.0650	No
104	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	13210	0.024	0.0540	No
105	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	13446	0.017	0.0433	No
106	IPO7	1442511_at 1454955_at 1458165_at	13685	0.010	0.0325	No
107	PODN	1435180_at	14260	-0.006	0.0062	No
108	DDX17	1437773_x_at 1439037_at 1452155_a_at	14403	-0.011	-0.0003	No
109	RNF121	1426503_a_at 1426504_a_at	14430	-0.011	-0.0014	No
110	RFC1	1418342_at 1449050_at 1451920_a_at	14628	-0.018	-0.0103	No
111	SALL1	1450489_at	14688	-0.020	-0.0129	No
112	KLF5	1430255_at 1451021_a_at 1451739_at	15319	-0.042	-0.0415	No
113	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	15467	-0.047	-0.0479	No
114	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	15478	-0.048	-0.0480	No
115	FMO4	1425799_at 1444852_at	15487	-0.048	-0.0480	No
116	PRIM1	1418369_at 1444544_at 1449061_a_at	15709	-0.056	-0.0577	No
117	PLK4	1419838_s_at 1426580_at 1452115_a_at	15985	-0.070	-0.0698	No
118	ZIC3	1423424_at 1438737_at	16203	-0.080	-0.0792	No
119	CASP8AP2	1449217_at	16429	-0.094	-0.0888	No
120	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16449	-0.095	-0.0890	No
121	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16751	-0.116	-0.1019	No
122	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	16753	-0.116	-0.1011	No
123	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	16864	-0.123	-0.1052	No
124	APRIN	1435242_at 1436161_at 1441553_at	17050	-0.138	-0.1126	No
125	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	17123	-0.144	-0.1148	No
126	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	17152	-0.147	-0.1150	No
127	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17244	-0.156	-0.1180	No
128	PRKDC	1451576_at	17327	-0.164	-0.1205	No
129	EGLN2	1416533_at	17361	-0.166	-0.1208	No
130	DAXX	1419026_at	17440	-0.174	-0.1230	No
131	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	17601	-0.190	-0.1289	No
132	NUP153	1441689_at 1441733_s_at 1452176_at	17817	-0.214	-0.1372	No
133	FBXO5	1429499_at	17869	-0.220	-0.1379	No
134	EZH2	1416544_at 1444263_at	17898	-0.223	-0.1375	No
135	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	18027	-0.243	-0.1415	No
136	CTDSP1	1452055_at	18261	-0.276	-0.1501	No
137	USP52	1426700_a_at	18283	-0.280	-0.1489	No
138	BRMS1L	1452850_s_at 1460443_at	18343	-0.286	-0.1495	No
139	PPM1D	1434142_at 1449092_at 1459069_at	18374	-0.291	-0.1486	No
140	CDC25A	1417131_at 1417132_at 1445995_at	18425	-0.297	-0.1487	No
141	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18697	-0.335	-0.1586	No
142	ADAMTS2	1435990_at 1455720_at 1457058_at	18967	-0.388	-0.1680	No
143	EIF5A	1437859_x_at 1451470_s_at	18999	-0.394	-0.1664	No
144	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19100	-0.415	-0.1678	No
145	HNRPA0	1428407_at	19291	-0.459	-0.1731	No
146	DDB2	1425706_a_at 1436680_s_at	19308	-0.465	-0.1703	No
147	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	19530	-0.519	-0.1765	No
148	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	19582	-0.533	-0.1748	No
149	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	19693	-0.563	-0.1755	No
150	CTCF	1418330_at 1449042_at	19751	-0.580	-0.1737	No
151	PIM1	1423006_at 1435458_at	19899	-0.622	-0.1758	No
152	EIF4G2	1415863_at 1452758_s_at	19916	-0.628	-0.1717	No
153	STAG2	1421849_at 1450396_at	20247	-0.758	-0.1811	No
154	NUTF2	1434367_s_at 1447440_at 1449017_at	20332	-0.792	-0.1790	No
155	RAB11B	1423448_at	20399	-0.825	-0.1757	No
156	SLC25A11	1426586_at	20475	-0.859	-0.1726	No
157	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	20853	-1.101	-0.1816	No
158	HRBL	1425362_at 1437642_at 1441347_at	20857	-1.104	-0.1733	No
159	DLST	1423710_at 1430161_at 1431011_at 1437775_at	21097	-1.353	-0.1740	No
160	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	21105	-1.362	-0.1640	No
161	AXUD1	1434350_at	21174	-1.449	-0.1561	No
162	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21284	-1.599	-0.1489	No
163	SF4	1424381_at 1444699_at	21336	-1.672	-0.1385	No
164	NR3C2	1435991_at 1440306_at 1442533_at	21371	-1.730	-0.1270	No
165	MCM3	1420029_at 1426653_at	21483	-1.983	-0.1170	No
166	ARID4A	1436191_at 1438464_at 1456420_at	21524	-2.082	-0.1030	No
167	TCP1	1442317_at 1448122_at	21530	-2.098	-0.0872	No
168	OSBPL7	1428893_at 1459966_at	21551	-2.155	-0.0718	No
169	CENPB	1426051_a_at 1435944_s_at	21659	-2.484	-0.0578	No
170	ZCCHC8	1423755_at 1441639_at	21773	-2.986	-0.0403	No
171	ID3	1416630_at	21780	-3.031	-0.0175	No
172	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	21813	-3.239	0.0057	No