Details for gene set V$E2F4DP1

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	V$E2F4DP1_01
Enrichment Score (ES)	0.47146395
Normalized Enrichment Score (NES)	1.5414155
Nominal p-value	0.0018867925
FDR q-value	0.13721861
FWER p-Value	0.725

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	43	4.243	0.0347	Yes
2	SFRS7	1424033_at 1424883_s_at 1436871_at	46	4.236	0.0712	Yes
3	HNRPD	1425142_a_at 1446083_at	59	3.935	0.1047	Yes
4	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	110	3.370	0.1315	Yes
5	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	251	2.504	0.1467	Yes
6	NOLC1	1428869_at 1428870_at 1450087_a_at	258	2.467	0.1678	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	280	2.372	0.1873	Yes
8	OLFML3	1448475_at	303	2.304	0.2062	Yes
9	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	310	2.282	0.2257	Yes
10	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	376	2.102	0.2408	Yes
11	ACO2	1436934_s_at 1442102_at 1451002_at	402	2.038	0.2573	Yes
12	CDC6	1417019_a_at	622	1.567	0.2608	Yes
13	POLR2A	1422311_a_at 1426242_at 1458710_at	664	1.498	0.2719	Yes
14	UNG	1425753_a_at	734	1.410	0.2809	Yes
15	GMNN	1417506_at	766	1.376	0.2914	Yes
16	ATAD2	1436174_at 1443146_at 1443229_at	798	1.334	0.3015	Yes
17	RBBP7	1415775_at 1456227_x_at	837	1.290	0.3109	Yes
18	LIG1	1416641_at	921	1.215	0.3175	Yes
19	SNRPD1	1416336_s_at	926	1.209	0.3278	Yes
20	TOPBP1	1452241_at 1458480_at	1029	1.121	0.3328	Yes
21	ATF5	1425927_a_at	1030	1.120	0.3425	Yes
22	MYC	1424942_a_at	1043	1.111	0.3516	Yes
23	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	1062	1.091	0.3602	Yes
24	CLSPN	1441984_at 1456280_at	1091	1.069	0.3681	Yes
25	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1092	1.069	0.3774	Yes
26	POLE2	1427094_at 1431440_at	1190	1.000	0.3815	Yes
27	POLD1	1448187_at 1456055_x_at	1223	0.980	0.3885	Yes
28	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1229	0.977	0.3967	Yes
29	RASAL2	1436910_at 1444671_at	1298	0.934	0.4017	Yes
30	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	1357	0.910	0.4069	Yes
31	RANBP1	1422547_at	1425	0.874	0.4114	Yes
32	RQCD1	1450887_at	1563	0.810	0.4121	Yes
33	MXD3	1422970_at 1438847_at 1448878_at	1622	0.783	0.4162	Yes
34	PHF5A	1424170_at	1645	0.768	0.4218	Yes
35	SLC9A5	1420070_a_at 1455760_at	1759	0.718	0.4228	Yes
36	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	1778	0.711	0.4281	Yes
37	DNAJC9	1426473_at	1805	0.702	0.4330	Yes
38	HMGA1	1416184_s_at	1840	0.692	0.4374	Yes
39	NPR3	1435184_at 1448024_at 1450286_at	1929	0.659	0.4391	Yes
40	MCM2	1434079_s_at 1448777_at	1953	0.651	0.4437	Yes
41	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2004	0.634	0.4468	Yes
42	YBX2	1420762_a_at	2026	0.628	0.4513	Yes
43	RRM2	1416120_at 1434437_x_at 1448226_at	2066	0.615	0.4548	Yes
44	E2F7	1437187_at	2153	0.591	0.4560	Yes
45	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2279	0.560	0.4551	Yes
46	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	2351	0.541	0.4565	Yes
47	AP1S1	1416087_at	2354	0.540	0.4611	Yes
48	MSH5	1430771_a_at 1449537_at	2385	0.534	0.4643	Yes
49	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2458	0.516	0.4654	Yes
50	MRPL40	1448849_at	2546	0.499	0.4658	Yes
51	ILF3	1422546_at 1436802_at 1460669_at	2570	0.492	0.4690	Yes
52	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	2608	0.486	0.4715	Yes
53	PCSK1	1421396_at	2937	0.428	0.4601	No
54	NELL2	1423560_at 1423561_at	3000	0.421	0.4609	No
55	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	3033	0.413	0.4630	No
56	SYNGR4	1418875_at	3049	0.410	0.4658	No
57	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	3095	0.403	0.4673	No
58	PRPS1	1416052_at	3171	0.392	0.4672	No
59	AK2	1448450_at 1448451_at	3259	0.380	0.4665	No
60	TYRO3	1425248_a_at 1425249_a_at	3303	0.375	0.4678	No
61	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	3382	0.366	0.4673	No
62	RET	1421359_at	3616	0.340	0.4596	No
63	MCM8	1429557_at	3676	0.335	0.4598	No
64	EPHB1	1455188_at	4191	0.295	0.4387	No
65	ZIM2	1432297_at	4350	0.285	0.4339	No
66	ZBTB4	1429722_at 1460488_at	4473	0.277	0.4307	No
67	PAQR4	1423101_at	4481	0.277	0.4328	No
68	PKMYT1	1418481_at 1438601_at	4550	0.273	0.4320	No
69	FANCC	1442265_at 1447632_at 1450861_at	4769	0.264	0.4243	No
70	STMN1	1415849_s_at	4880	0.258	0.4214	No
71	RTBDN	1451603_at 1457331_at	5205	0.243	0.4087	No
72	H2AFZ	1441370_at	5496	0.231	0.3973	No
73	FHOD1	1435557_at	5614	0.227	0.3939	No
74	DNAJC5G	1437814_at	5670	0.225	0.3933	No
75	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	5694	0.224	0.3942	No
76	STK35	1431107_at 1439802_at	5726	0.223	0.3947	No
77	KCNS2	1421342_at 1441211_at 1457325_at	5975	0.213	0.3852	No
78	E2F3	1427462_at 1434564_at	6026	0.211	0.3847	No
79	MCM4	1416214_at 1436708_x_at	6049	0.210	0.3855	No
80	HS6ST3	1421599_at	6502	0.195	0.3664	No
81	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	6643	0.190	0.3616	No
82	ONECUT1	1421447_at 1450252_at 1456974_at	6681	0.189	0.3616	No
83	CORT	1449820_at	6992	0.179	0.3489	No
84	PCNA	1417947_at	7044	0.177	0.3481	No
85	RAVER1	1427110_at 1427111_s_at 1444966_at	7164	0.174	0.3441	No
86	AP4M1	1418846_at	7271	0.170	0.3407	No
87	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	7333	0.169	0.3394	No
88	E2F1	1417878_at 1431875_a_at 1447840_x_at	7608	0.160	0.3282	No
89	KCNA6	1421568_at 1441049_at 1456954_at	7776	0.155	0.3218	No
90	MDGA1	1432062_at	8338	0.141	0.2973	No
91	MYH10	1441057_at 1452740_at	8799	0.129	0.2773	No
92	SEMA6A	1421414_a_at 1425903_at 1436458_at	8935	0.126	0.2721	No
93	CBX3	1432628_at 1454305_at	9073	0.122	0.2669	No
94	LHX5	1420348_at	9221	0.119	0.2612	No
95	FANCG	1420960_at	9663	0.108	0.2419	No
96	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9766	0.105	0.2381	No
97	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	10079	0.098	0.2246	No
98	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	10211	0.095	0.2194	No
99	HNRPR	1427129_a_at 1438807_at 1452030_a_at	10304	0.093	0.2160	No
100	RPS20	1456373_x_at 1456436_x_at	10317	0.093	0.2162	No
101	GABRB3	1421189_at 1421190_at 1435021_at	10900	0.079	0.1902	No
102	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11648	0.062	0.1564	No
103	MAZ	1427099_at	11861	0.056	0.1471	No
104	PHF15	1430081_at 1455345_at	12053	0.051	0.1388	No
105	NRK	1436399_s_at 1450078_at 1450079_at	12210	0.047	0.1320	No
106	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	12258	0.046	0.1303	No
107	HOXC10	1439798_at	12336	0.045	0.1271	No
108	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	12344	0.045	0.1272	No
109	ARHGAP11A	1438434_at	12759	0.035	0.1085	No
110	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12965	0.030	0.0993	No
111	ACBD6	1452601_a_at 1453199_at	13205	0.024	0.0885	No
112	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	13468	0.016	0.0767	No
113	IPO7	1442511_at 1454955_at 1458165_at	13685	0.010	0.0668	No
114	POU4F1	1429667_at 1429668_at	13781	0.008	0.0625	No
115	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	13897	0.005	0.0573	No
116	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14132	-0.002	0.0465	No
117	PODN	1435180_at	14260	-0.006	0.0408	No
118	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	15358	-0.043	-0.0093	No
119	MSH2	1416988_at 1447888_x_at	15440	-0.046	-0.0126	No
120	FMO4	1425799_at 1444852_at	15487	-0.048	-0.0143	No
121	CASP8AP2	1449217_at	16429	-0.094	-0.0567	No
122	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	16459	-0.096	-0.0572	No
123	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16751	-0.116	-0.0696	No
124	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	16864	-0.123	-0.0736	No
125	MAPK6	1419168_at 1419169_at 1429963_at 1459146_at	16941	-0.129	-0.0760	No
126	KLF4	1417394_at 1417395_at	17025	-0.136	-0.0786	No
127	SLC25A14	1417154_at	17112	-0.143	-0.0814	No
128	GATA1	1449232_at	17210	-0.153	-0.0845	No
129	PRKDC	1451576_at	17327	-0.164	-0.0884	No
130	GPRC5B	1424613_at 1451411_at	17333	-0.164	-0.0872	No
131	CCNT1	1419313_at 1456477_at	17385	-0.169	-0.0881	No
132	EED	1448653_at	17478	-0.178	-0.0908	No
133	HCN3	1451023_at	17698	-0.200	-0.0991	No
134	FBXO5	1429499_at	17869	-0.220	-0.1050	No
135	EZH2	1416544_at 1444263_at	17898	-0.223	-0.1044	No
136	USP37	1434242_at 1438212_at	18018	-0.241	-0.1078	No
137	USP52	1426700_a_at	18283	-0.280	-0.1175	No
138	BRMS1L	1452850_s_at 1460443_at	18343	-0.286	-0.1177	No
139	PPM1D	1434142_at 1449092_at 1459069_at	18374	-0.291	-0.1166	No
140	CDC25A	1417131_at 1417132_at 1445995_at	18425	-0.297	-0.1163	No
141	TBX6	1449868_at	18581	-0.319	-0.1207	No
142	PHC1	1423212_at	18618	-0.325	-0.1195	No
143	ALDH6A1	1448104_at	18695	-0.335	-0.1201	No
144	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18697	-0.335	-0.1173	No
145	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	18750	-0.345	-0.1167	No
146	HNRPUL1	1451984_at	18773	-0.350	-0.1146	No
147	ADAMTS2	1435990_at 1455720_at 1457058_at	18967	-0.388	-0.1202	No
148	IL4I1	1419192_at	19449	-0.495	-0.1380	No
149	UGCGL1	1432318_at 1448009_at 1455839_at	19503	-0.512	-0.1360	No
150	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	19582	-0.533	-0.1350	No
151	PIM1	1423006_at 1435458_at	19899	-0.622	-0.1441	No
152	CDC5L	1428092_at 1460429_at	19943	-0.639	-0.1405	No
153	SP3	1431804_a_at 1459360_at	20191	-0.732	-0.1456	No
154	STAG2	1421849_at 1450396_at	20247	-0.758	-0.1415	No
155	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	20469	-0.858	-0.1443	No
156	PAPOLG	1427241_at 1446307_at	20624	-0.934	-0.1433	No
157	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	20973	-1.221	-0.1487	No
158	H2AFV	1428029_a_at 1436596_at	21023	-1.274	-0.1400	No
159	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	21105	-1.362	-0.1319	No
160	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21284	-1.599	-0.1263	No
161	SLCO3A1	1418030_at 1434537_at 1448918_at	21456	-1.925	-0.1175	No
162	MCM3	1420029_at 1426653_at	21483	-1.983	-0.1015	No
163	ARID4A	1436191_at 1438464_at 1456420_at	21524	-2.082	-0.0854	No
164	KBTBD7	1428192_at 1439865_at 1452700_s_at	21583	-2.218	-0.0689	No
165	ZCCHC8	1423755_at 1441639_at	21773	-2.986	-0.0517	No
166	ID3	1416630_at	21780	-3.031	-0.0258	No
167	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	21885	-3.812	0.0023	No