Details for gene set V$E2F1DP1

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	V$E2F1DP1_01
Enrichment Score (ES)	0.44812876
Normalized Enrichment Score (NES)	1.4574538
Nominal p-value	0.0019762847
FDR q-value	0.13596231
FWER p-Value	0.959

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	43	4.243	0.0365	Yes
2	SFRS7	1424033_at 1424883_s_at 1436871_at	46	4.236	0.0748	Yes
3	HNRPD	1425142_a_at 1446083_at	59	3.935	0.1100	Yes
4	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	110	3.370	0.1383	Yes
5	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	251	2.504	0.1545	Yes
6	NOLC1	1428869_at 1428870_at 1450087_a_at	258	2.467	0.1766	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	280	2.372	0.1972	Yes
8	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	310	2.282	0.2166	Yes
9	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	376	2.102	0.2326	Yes
10	ACO2	1436934_s_at 1442102_at 1451002_at	402	2.038	0.2500	Yes
11	CDC6	1417019_a_at	622	1.567	0.2541	Yes
12	POLR2A	1422311_a_at 1426242_at 1458710_at	664	1.498	0.2658	Yes
13	UNG	1425753_a_at	734	1.410	0.2755	Yes
14	GMNN	1417506_at	766	1.376	0.2865	Yes
15	ATAD2	1436174_at 1443146_at 1443229_at	798	1.334	0.2972	Yes
16	SNRPD1	1416336_s_at	926	1.209	0.3023	Yes
17	TOPBP1	1452241_at 1458480_at	1029	1.121	0.3078	Yes
18	ATF5	1425927_a_at	1030	1.120	0.3180	Yes
19	MYC	1424942_a_at	1043	1.111	0.3275	Yes
20	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	1062	1.091	0.3366	Yes
21	CLSPN	1441984_at 1456280_at	1091	1.069	0.3450	Yes
22	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1092	1.069	0.3547	Yes
23	POLE2	1427094_at 1431440_at	1190	1.000	0.3593	Yes
24	POLD1	1448187_at 1456055_x_at	1223	0.980	0.3667	Yes
25	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1229	0.977	0.3754	Yes
26	RASAL2	1436910_at 1444671_at	1298	0.934	0.3807	Yes
27	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	1357	0.910	0.3863	Yes
28	RANBP1	1422547_at	1425	0.874	0.3911	Yes
29	RQCD1	1450887_at	1563	0.810	0.3922	Yes
30	MXD3	1422970_at 1438847_at 1448878_at	1622	0.783	0.3966	Yes
31	PHF5A	1424170_at	1645	0.768	0.4026	Yes
32	SLC9A5	1420070_a_at 1455760_at	1759	0.718	0.4039	Yes
33	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	1778	0.711	0.4095	Yes
34	DNAJC9	1426473_at	1805	0.702	0.4147	Yes
35	HMGA1	1416184_s_at	1840	0.692	0.4194	Yes
36	MCM2	1434079_s_at 1448777_at	1953	0.651	0.4202	Yes
37	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2004	0.634	0.4236	Yes
38	YBX2	1420762_a_at	2026	0.628	0.4284	Yes
39	RRM2	1416120_at 1434437_x_at 1448226_at	2066	0.615	0.4322	Yes
40	E2F7	1437187_at	2153	0.591	0.4336	Yes
41	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2279	0.560	0.4329	Yes
42	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	2351	0.541	0.4345	Yes
43	AP1S1	1416087_at	2354	0.540	0.4394	Yes
44	MSH5	1430771_a_at 1449537_at	2385	0.534	0.4428	Yes
45	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2458	0.516	0.4442	Yes
46	MRPL40	1448849_at	2546	0.499	0.4447	Yes
47	ILF3	1422546_at 1436802_at 1460669_at	2570	0.492	0.4481	Yes
48	PCSK1	1421396_at	2937	0.428	0.4352	No
49	NELL2	1423560_at 1423561_at	3000	0.421	0.4362	No
50	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	3033	0.413	0.4385	No
51	SYNGR4	1418875_at	3049	0.410	0.4415	No
52	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	3095	0.403	0.4431	No
53	PRPS1	1416052_at	3171	0.392	0.4432	No
54	AK2	1448450_at 1448451_at	3259	0.380	0.4426	No
55	TYRO3	1425248_a_at 1425249_a_at	3303	0.375	0.4441	No
56	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	3382	0.366	0.4438	No
57	RET	1421359_at	3616	0.340	0.4362	No
58	MCM8	1429557_at	3676	0.335	0.4365	No
59	EPHB1	1455188_at	4191	0.295	0.4156	No
60	ZIM2	1432297_at	4350	0.285	0.4109	No
61	ZBTB4	1429722_at 1460488_at	4473	0.277	0.4078	No
62	PAQR4	1423101_at	4481	0.277	0.4100	No
63	PKMYT1	1418481_at 1438601_at	4550	0.273	0.4094	No
64	FANCC	1442265_at 1447632_at 1450861_at	4769	0.264	0.4017	No
65	STMN1	1415849_s_at	4880	0.258	0.3990	No
66	SLITRK4	1434878_at 1437744_at	5069	0.250	0.3927	No
67	RTBDN	1451603_at 1457331_at	5205	0.243	0.3887	No
68	H2AFZ	1441370_at	5496	0.231	0.3775	No
69	FHOD1	1435557_at	5614	0.227	0.3741	No
70	DNAJC5G	1437814_at	5670	0.225	0.3737	No
71	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	5694	0.224	0.3746	No
72	STK35	1431107_at 1439802_at	5726	0.223	0.3752	No
73	KCNS2	1421342_at 1441211_at 1457325_at	5975	0.213	0.3658	No
74	E2F3	1427462_at 1434564_at	6026	0.211	0.3654	No
75	MCM4	1416214_at 1436708_x_at	6049	0.210	0.3663	No
76	HS6ST3	1421599_at	6502	0.195	0.3473	No
77	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	6643	0.190	0.3426	No
78	CORT	1449820_at	6992	0.179	0.3282	No
79	GLRA3	1450239_at	7024	0.178	0.3284	No
80	PCNA	1417947_at	7044	0.177	0.3291	No
81	RAVER1	1427110_at 1427111_s_at 1444966_at	7164	0.174	0.3253	No
82	AP4M1	1418846_at	7271	0.170	0.3219	No
83	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	7333	0.169	0.3207	No
84	E2F1	1417878_at 1431875_a_at 1447840_x_at	7608	0.160	0.3095	No
85	KCNA6	1421568_at 1441049_at 1456954_at	7776	0.155	0.3033	No
86	MYH10	1441057_at 1452740_at	8799	0.129	0.2575	No
87	SEMA6A	1421414_a_at 1425903_at 1436458_at	8935	0.126	0.2524	No
88	CBX3	1432628_at 1454305_at	9073	0.122	0.2473	No
89	FANCG	1420960_at	9663	0.108	0.2212	No
90	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9766	0.105	0.2175	No
91	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	10079	0.098	0.2040	No
92	HNRPR	1427129_a_at 1438807_at 1452030_a_at	10304	0.093	0.1946	No
93	RPS20	1456373_x_at 1456436_x_at	10317	0.093	0.1949	No
94	GABRB3	1421189_at 1421190_at 1435021_at	10900	0.079	0.1689	No
95	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11648	0.062	0.1351	No
96	MAZ	1427099_at	11861	0.056	0.1259	No
97	PHF15	1430081_at 1455345_at	12053	0.051	0.1176	No
98	NRK	1436399_s_at 1450078_at 1450079_at	12210	0.047	0.1108	No
99	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	12258	0.046	0.1091	No
100	HOXC10	1439798_at	12336	0.045	0.1060	No
101	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	12344	0.045	0.1060	No
102	ARHGAP11A	1438434_at	12759	0.035	0.0874	No
103	PTMA	1423455_at	12819	0.034	0.0849	No
104	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12965	0.030	0.0786	No
105	ACBD6	1452601_a_at 1453199_at	13205	0.024	0.0678	No
106	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	13210	0.024	0.0678	No
107	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	13468	0.016	0.0562	No
108	IPO7	1442511_at 1454955_at 1458165_at	13685	0.010	0.0463	No
109	POU4F1	1429667_at 1429668_at	13781	0.008	0.0420	No
110	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	13897	0.005	0.0368	No
111	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14132	-0.002	0.0261	No
112	PODN	1435180_at	14260	-0.006	0.0203	No
113	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	15358	-0.043	-0.0297	No
114	MSH2	1416988_at 1447888_x_at	15440	-0.046	-0.0330	No
115	FMO4	1425799_at 1444852_at	15487	-0.048	-0.0347	No
116	CASP8AP2	1449217_at	16429	-0.094	-0.0770	No
117	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	16459	-0.096	-0.0775	No
118	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16751	-0.116	-0.0898	No
119	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	16864	-0.123	-0.0938	No
120	MAPK6	1419168_at 1419169_at 1429963_at 1459146_at	16941	-0.129	-0.0962	No
121	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	17152	-0.147	-0.1045	No
122	GATA1	1449232_at	17210	-0.153	-0.1057	No
123	PRKDC	1451576_at	17327	-0.164	-0.1095	No
124	GPRC5B	1424613_at 1451411_at	17333	-0.164	-0.1083	No
125	CCNT1	1419313_at 1456477_at	17385	-0.169	-0.1091	No
126	EED	1448653_at	17478	-0.178	-0.1117	No
127	HCN3	1451023_at	17698	-0.200	-0.1199	No
128	FBXO5	1429499_at	17869	-0.220	-0.1257	No
129	EZH2	1416544_at 1444263_at	17898	-0.223	-0.1250	No
130	USP37	1434242_at 1438212_at	18018	-0.241	-0.1283	No
131	USP52	1426700_a_at	18283	-0.280	-0.1379	No
132	BRMS1L	1452850_s_at 1460443_at	18343	-0.286	-0.1380	No
133	PPM1D	1434142_at 1449092_at 1459069_at	18374	-0.291	-0.1367	No
134	CDC25A	1417131_at 1417132_at 1445995_at	18425	-0.297	-0.1363	No
135	TBX6	1449868_at	18581	-0.319	-0.1405	No
136	PHC1	1423212_at	18618	-0.325	-0.1393	No
137	ALDH6A1	1448104_at	18695	-0.335	-0.1397	No
138	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18697	-0.335	-0.1367	No
139	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	18750	-0.345	-0.1360	No
140	HNRPUL1	1451984_at	18773	-0.350	-0.1338	No
141	BRPF1	1460402_at	18907	-0.376	-0.1365	No
142	ADAMTS2	1435990_at 1455720_at 1457058_at	18967	-0.388	-0.1357	No
143	IL4I1	1419192_at	19449	-0.495	-0.1533	No
144	UGCGL1	1432318_at 1448009_at 1455839_at	19503	-0.512	-0.1511	No
145	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	19582	-0.533	-0.1498	No
146	PIM1	1423006_at 1435458_at	19899	-0.622	-0.1587	No
147	CDC5L	1428092_at 1460429_at	19943	-0.639	-0.1549	No
148	SP3	1431804_a_at 1459360_at	20191	-0.732	-0.1596	No
149	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	20469	-0.858	-0.1645	No
150	TRIM39	1418851_at	20684	-0.980	-0.1655	No
151	PPIG	1434475_at 1435341_at 1436505_at	20749	-1.028	-0.1591	No
152	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	20973	-1.221	-0.1582	No
153	H2AFV	1428029_a_at 1436596_at	21023	-1.274	-0.1489	No
154	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	21105	-1.362	-0.1403	No
155	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21284	-1.599	-0.1340	No
156	SLCO3A1	1418030_at 1434537_at 1448918_at	21456	-1.925	-0.1244	No
157	MCM3	1420029_at 1426653_at	21483	-1.983	-0.1076	No
158	ARID4A	1436191_at 1438464_at 1456420_at	21524	-2.082	-0.0905	No
159	KBTBD7	1428192_at 1439865_at 1452700_s_at	21583	-2.218	-0.0731	No
160	ZCCHC8	1423755_at 1441639_at	21773	-2.986	-0.0547	No
161	ID3	1416630_at	21780	-3.031	-0.0275	No
162	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	21885	-3.812	0.0023	No