Details for gene set V$ATF6

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$ATF6_01
Enrichment Score (ES)	-0.5528105
Normalized Enrichment Score (NES)	-1.6612775
Nominal p-value	0.0
FDR q-value	0.33349165
FWER p-Value	0.245

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TNKS2	1428388_at 1437793_at 1447522_s_at 1452772_at 1457468_at	171	3.004	0.0409	No
2	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	1062	1.091	0.0179	No
3	MRPS18B	1451164_a_at	1187	1.003	0.0285	No
4	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1229	0.977	0.0425	No
5	DUSP4	1428834_at	1355	0.910	0.0515	No
6	RAB2	1418621_at 1418622_at 1418623_at 1419945_s_at 1419946_s_at 1436477_x_at 1449676_at	1392	0.891	0.0643	No
7	NPTX1	1422130_at 1434877_at	1554	0.815	0.0702	No
8	LMO4	1420981_a_at 1439651_at	1803	0.702	0.0702	No
9	GCC1	1424799_a_at 1429033_at	2227	0.573	0.0602	No
10	PTOV1	1416945_at 1438058_s_at 1458357_x_at	2490	0.510	0.0565	No
11	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	2582	0.491	0.0603	No
12	TBX20	1422219_a_at 1425158_at 1453351_at	2944	0.427	0.0507	No
13	TYRO3	1425248_a_at 1425249_a_at	3303	0.375	0.0404	No
14	ARMCX2	1415780_a_at 1437849_x_at 1456739_x_at	3388	0.365	0.0425	No
15	TRPC1	1421095_a_at 1421096_at	3475	0.355	0.0443	No
16	GOLGB1	1433135_at 1435032_at 1460535_at	3496	0.351	0.0491	No
17	LMX1B	1421769_at	3511	0.350	0.0541	No
18	TPT1	1416642_a_at 1416643_at	3959	0.312	0.0387	No
19	GFRA1	1421973_at 1439015_at 1450440_at	4945	0.255	-0.0022	No
20	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	5150	0.246	-0.0076	No
21	LENG9	1440190_at 1440191_s_at 1455497_at	5329	0.238	-0.0119	No
22	ERF	1422114_at 1435561_at	5583	0.228	-0.0198	No
23	IL1RAPL1	1445821_at 1458964_at	5785	0.221	-0.0254	No
24	FLNC	1424063_at 1447812_x_at 1449073_at	5789	0.220	-0.0219	No
25	SLC39A5	1429523_a_at	6487	0.195	-0.0507	No
26	GRIA3	1420563_at 1434728_at	6570	0.192	-0.0513	No
27	HCRTR2	1444223_at	7054	0.177	-0.0705	No
28	TWIST1	1418733_at	7069	0.176	-0.0683	No
29	ADAMTS3	1441693_at 1458143_at	7435	0.166	-0.0823	No
30	KCNA6	1421568_at 1441049_at 1456954_at	7776	0.155	-0.0954	No
31	KDELR3	1418538_at	8209	0.144	-0.1128	No
32	SLC22A17	1448209_a_at	8342	0.140	-0.1166	No
33	SP1	1418180_at 1448994_at 1454852_at	8439	0.138	-0.1187	No
34	GSC	1421412_at	9068	0.122	-0.1455	No
35	LHX5	1420348_at	9221	0.119	-0.1505	No
36	GNG4	1417943_at 1417944_at 1447669_s_at	9322	0.116	-0.1532	No
37	PITX2	1424797_a_at 1450482_a_at	10125	0.097	-0.1884	No
38	IRX3	1418517_at	10452	0.089	-0.2018	No
39	SCYL1	1430354_x_at 1436804_s_at 1451051_a_at	11571	0.064	-0.2520	No
40	HOXB9	1452317_at	11895	0.055	-0.2659	No
41	KDELR1	1460211_a_at	12229	0.047	-0.2804	No
42	C1QTNF7	1429030_at 1460163_at	12264	0.046	-0.2812	No
43	KLF13	1432543_a_at 1456030_at	12893	0.032	-0.3094	No
44	NTRK2	1420837_at 1420838_at 1435196_at 1435305_at 1437560_at 1446712_at	13260	0.022	-0.3258	No
45	NKX2-2	1421112_at	13361	0.019	-0.3301	No
46	USP2	1417168_a_at 1417169_at	13527	0.014	-0.3374	No
47	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14132	-0.002	-0.3650	No
48	NANS	1417773_at 1417774_at	14258	-0.006	-0.3706	No
49	XPNPEP1	1422443_at	14308	-0.007	-0.3727	No
50	NOL4	1430189_at 1441447_at 1456387_at	14474	-0.013	-0.3801	No
51	GRIN2B	1422223_at 1431700_at	14738	-0.021	-0.3918	No
52	GDNF	1419080_at	15543	-0.050	-0.4278	No
53	PAX1	1449359_at	15571	-0.051	-0.4282	No
54	SRP19	1450891_at	15636	-0.053	-0.4302	No
55	KDELR2	1417204_at 1417205_at	16051	-0.073	-0.4480	No
56	TLOC1	1432635_a_at 1433704_s_at 1439233_at 1444811_at 1454697_at 1455698_at	16391	-0.091	-0.4620	No
57	GBF1	1415709_s_at 1415757_at 1432677_at 1438207_at	16432	-0.094	-0.4623	No
58	LHX1	1421951_at 1450428_at	16502	-0.099	-0.4639	No
59	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16751	-0.116	-0.4734	No
60	SLC39A13	1423926_at	17380	-0.168	-0.4994	No
61	SYT11	1429314_at 1429315_at 1429729_at 1436176_at 1449264_at 1455176_a_at	17937	-0.229	-0.5211	No
62	DHX40	1428267_at 1457839_at	17991	-0.236	-0.5197	No
63	SLC30A5	1422497_at	18217	-0.268	-0.5257	No
64	TPM4	1433883_at	18579	-0.319	-0.5370	No
65	PHC1	1423212_at	18618	-0.325	-0.5335	No
66	PER1	1449851_at	18904	-0.376	-0.5404	No
67	GRB2	1418508_a_at 1449111_a_at	18989	-0.393	-0.5379	No
68	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19100	-0.415	-0.5362	No
69	BRD2	1423502_at 1437210_a_at	19309	-0.465	-0.5382	No
70	OSBP	1460350_at	19545	-0.524	-0.5404	No
71	ATBF1	1420649_at 1420650_at 1429725_at 1445941_at 1446094_at 1449947_s_at 1453267_at 1460006_at	19778	-0.587	-0.5415	No
72	SEC24D	1426972_at 1458821_at	20026	-0.668	-0.5420	Yes
73	PPP1R10	1426726_at 1426727_s_at 1430560_at	20038	-0.671	-0.5316	Yes
74	MADD	1425735_at 1455502_at	20168	-0.725	-0.5257	Yes
75	TRIM39	1418851_at	20684	-0.980	-0.5334	Yes
76	ELF1	1417540_at 1439319_at	20774	-1.049	-0.5204	Yes
77	SH2D2A	1449105_at	20817	-1.077	-0.5049	Yes
78	SEC23A	1423347_at	20990	-1.237	-0.4927	Yes
79	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	21093	-1.350	-0.4754	Yes
80	DLST	1423710_at 1430161_at 1431011_at 1437775_at	21097	-1.353	-0.4536	Yes
81	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	21105	-1.362	-0.4319	Yes
82	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	21261	-1.567	-0.4135	Yes
83	RAB6IP1	1424015_at	21345	-1.688	-0.3899	Yes
84	RORC	1425792_a_at 1425793_a_at	21494	-2.024	-0.3638	Yes
85	ICA1	1417901_a_at 1431644_a_at	21517	-2.070	-0.3313	Yes
86	NR4A1	1416505_at	21728	-2.816	-0.2952	Yes
87	EGR2	1427682_a_at 1427683_at	21904	-4.293	-0.2335	Yes
88	EGR3	1421486_at 1436329_at	21908	-4.438	-0.1616	Yes
89	ARF4	1423052_at 1423053_at 1434074_x_at 1439367_x_at 1442905_at 1457348_at	21914	-4.719	-0.0853	Yes
90	EGR1	1417065_at	21928	-5.313	0.0004	Yes