Details for gene set V$AREB6

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AREB6_04
Enrichment Score (ES)	-0.44946036
Normalized Enrichment Score (NES)	-1.4740703
Nominal p-value	0.00591716
FDR q-value	0.2030221
FWER p-Value	0.938

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	8	6.245	0.0642	No
2	OLFML3	1448475_at	303	2.304	0.0745	No
3	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	376	2.102	0.0929	No
4	GART	1416283_at 1424435_a_at 1424436_at 1441911_x_at	652	1.518	0.0960	No
5	TRPS1	1434286_at 1438214_at 1440026_at 1441333_at 1443161_at 1449530_at 1456983_at 1457445_at	668	1.491	0.1107	No
6	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	733	1.411	0.1224	No
7	TAGLN2	1426529_a_at	936	1.204	0.1255	No
8	HMGB1	1416176_at 1425048_a_at 1435324_x_at	997	1.148	0.1346	No
9	PXN	1424027_at 1426085_a_at 1456135_s_at	1261	0.958	0.1325	No
10	CTGF	1416953_at	1531	0.826	0.1286	No
11	LMO4	1420981_a_at 1439651_at	1803	0.702	0.1234	No
12	GEMIN4	1433622_at	1969	0.648	0.1225	No
13	EIF4G1	1427036_a_at 1427037_at 1438686_at	2273	0.561	0.1144	No
14	MSH5	1430771_a_at 1449537_at	2385	0.534	0.1148	No
15	M6PR	1416385_a_at 1416386_a_at	2616	0.485	0.1093	No
16	PLEC1	1419835_s_at 1434610_at 1437554_at	2674	0.474	0.1115	No
17	PURB	1419640_at 1419641_at 1419642_at 1428254_at 1436940_at	2796	0.453	0.1107	No
18	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	2876	0.438	0.1115	No
19	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	3020	0.416	0.1093	No
20	WNT2B	1421465_at	3063	0.408	0.1116	No
21	GNB2L1	1440120_at 1455168_a_at	3243	0.383	0.1073	No
22	ELOVL6	1417403_at 1417404_at 1445062_at 1445578_at 1445641_at	3372	0.367	0.1052	No
23	PIK3R3	1445097_at 1447068_at 1456482_at	3939	0.314	0.0824	No
24	LGI2	1440147_at 1457040_at	4674	0.268	0.0514	No
25	PRDM1	1420425_at 1444997_at	4910	0.257	0.0433	No
26	TRERF1	1444654_at	5054	0.250	0.0393	No
27	WNT4	1450782_at	5214	0.243	0.0345	No
28	FES	1427368_x_at 1452410_a_at	5287	0.240	0.0336	No
29	RASGRF1	1422600_at 1424734_at 1435614_s_at 1459049_at 1459056_at	5438	0.233	0.0292	No
30	NDST4	1421318_at 1431452_at 1450195_at	5536	0.230	0.0271	No
31	OMG	1418212_at	5617	0.227	0.0257	No
32	FZD1	1422985_at 1437284_at	5631	0.226	0.0275	No
33	TMC5	1452934_at	5881	0.216	0.0183	No
34	GABRQ	1421536_at	6097	0.209	0.0105	No
35	HTR2C	1435513_at 1450477_at	6286	0.202	0.0040	No
36	SHC3	1450326_at	6309	0.201	0.0051	No
37	HOXA11	1420414_at	6511	0.195	-0.0022	No
38	ARPP-19	1422609_at 1441455_at 1450685_at	6886	0.182	-0.0175	No
39	BMP4	1422912_at	6993	0.179	-0.0205	No
40	EFNA1	1416895_at 1448510_at	7198	0.173	-0.0281	No
41	HR	1422110_at 1435950_at	7231	0.172	-0.0278	No
42	LMOD1	1427485_at	7352	0.168	-0.0316	No
43	SOSTDC1	1449340_at 1460250_at	7464	0.165	-0.0350	No
44	KCNK5	1421852_at 1450398_at	7519	0.163	-0.0358	No
45	ATP8B3	1419713_at 1438604_at	7686	0.158	-0.0418	No
46	EFNB2	1419638_at 1419639_at 1440069_at 1449548_at 1449549_at	7697	0.157	-0.0406	No
47	SDK2	1430425_at 1457333_at	7716	0.157	-0.0398	No
48	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	7919	0.151	-0.0476	No
49	TSGA10	1436045_at 1447283_at	7933	0.151	-0.0466	No
50	HSPB2	1429888_a_at	8027	0.148	-0.0493	No
51	PHEX	1421979_at 1450445_at	8291	0.142	-0.0600	No
52	TNFRSF17	1420782_at	8349	0.140	-0.0611	No
53	ESRRG	1421747_at 1455267_at 1457896_at	8458	0.138	-0.0647	No
54	CRYAB	1416455_a_at 1434369_a_at 1435837_at	8519	0.136	-0.0660	No
55	FBLN5	1416164_at 1446377_at	8726	0.131	-0.0741	No
56	NEUROG1	1438551_at 1450836_at	8727	0.131	-0.0728	No
57	PURG	1424970_at 1452029_a_at	8751	0.130	-0.0725	No
58	ATP1B4	1422908_at	8810	0.129	-0.0738	No
59	TRIM14	1430796_at	8864	0.127	-0.0750	No
60	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	8874	0.127	-0.0741	No
61	FCHSD2	1434260_at 1456949_at	8960	0.125	-0.0767	No
62	SOX11	1429051_s_at 1429372_at 1431225_at 1436790_a_at 1453002_at 1453125_at	9167	0.120	-0.0849	No
63	PABPC5	1446162_at	9189	0.119	-0.0846	No
64	PPP1R9B	1447247_at 1447486_at	9214	0.119	-0.0845	No
65	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	9226	0.118	-0.0838	No
66	FLRT1	1443143_at	9255	0.118	-0.0839	No
67	ASPN	1416652_at 1448421_s_at	9401	0.114	-0.0893	No
68	OTP	1422285_at	9513	0.112	-0.0933	No
69	SLC30A3	1460654_at	9579	0.110	-0.0951	No
70	CHST1	1449147_at	9601	0.109	-0.0950	No
71	NXF3	1456035_at	9703	0.107	-0.0985	No
72	HOXA2	1419602_at	9749	0.106	-0.0995	No
73	WNT2	1449425_at	10267	0.093	-0.1223	No
74	MAFB	1451715_at 1451716_at	10274	0.093	-0.1216	No
75	ANKRD22	1421651_at 1453239_a_at	10600	0.086	-0.1357	No
76	RORA	1420583_a_at 1424034_at 1424035_at 1436325_at 1436326_at 1441085_at 1443511_at 1443647_at 1446360_at 1455165_at 1457177_at 1458129_at	10762	0.082	-0.1422	No
77	FOXA1	1418496_at	10813	0.081	-0.1437	No
78	COL8A1	1418440_at 1418441_at 1442794_at 1447819_x_at 1455627_at	10850	0.080	-0.1445	No
79	VAX1	1421774_at	10974	0.077	-0.1494	No
80	NFATC4	1423380_s_at 1432821_at 1454369_a_at	10981	0.077	-0.1488	No
81	PPP1R1B	1451331_at	11087	0.074	-0.1529	No
82	SOX10	1424985_a_at 1425369_a_at 1451689_a_at	11118	0.074	-0.1535	No
83	CMKLR1	1426072_at 1456887_at	11209	0.072	-0.1569	No
84	TJP1	1417749_a_at	11230	0.072	-0.1571	No
85	LRRN3	1434539_at	11289	0.071	-0.1590	No
86	SPG20	1424875_at 1424876_s_at	11424	0.067	-0.1645	No
87	SLN	1420883_at 1420884_at	11511	0.065	-0.1678	No
88	ROM1	1448996_at	11575	0.063	-0.1700	No
89	POFUT1	1443881_at 1450137_at 1456323_at	11580	0.063	-0.1696	No
90	ERG	1425370_a_at 1440244_at	11676	0.061	-0.1733	No
91	PHF15	1430081_at 1455345_at	12053	0.051	-0.1901	No
92	ZADH2	1451277_at	12101	0.050	-0.1917	No
93	NRK	1436399_s_at 1450078_at 1450079_at	12210	0.047	-0.1962	No
94	HOXC10	1439798_at	12336	0.045	-0.2015	No
95	GATA6	1425463_at 1425464_at 1443081_at	12587	0.039	-0.2126	No
96	OTX2	1425926_a_at	12978	0.030	-0.2302	No
97	PDZRN4	1456512_at	13177	0.024	-0.2390	No
98	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	13210	0.024	-0.2403	No
99	WRN	1425074_at 1425982_a_at 1450163_a_at	13473	0.016	-0.2522	No
100	POU4F1	1429667_at 1429668_at	13781	0.008	-0.2662	No
101	KLF12	1439846_at 1439847_s_at 1441040_at 1455521_at	13978	0.002	-0.2752	No
102	ST5	1428372_at	14095	-0.001	-0.2805	No
103	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	14115	-0.002	-0.2814	No
104	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	14130	-0.002	-0.2820	No
105	FOXA2	1422833_at	14175	-0.003	-0.2840	No
106	IRX5	1421072_at	14252	-0.006	-0.2874	No
107	DDX17	1437773_x_at 1439037_at 1452155_a_at	14403	-0.011	-0.2942	No
108	BDNF	1422168_a_at 1422169_a_at	14468	-0.012	-0.2970	No
109	MAPK3	1427060_at	14783	-0.022	-0.3112	No
110	SNAP25	1416828_at 1443398_at	14862	-0.025	-0.3145	No
111	FGF9	1420795_at 1438718_at 1445258_at	14991	-0.030	-0.3201	No
112	SOX4	1455867_at 1458332_x_at	15202	-0.037	-0.3294	No
113	MAP1A	1460566_at	15276	-0.040	-0.3323	No
114	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	15313	-0.041	-0.3336	No
115	KLF5	1430255_at 1451021_a_at 1451739_at	15319	-0.042	-0.3334	No
116	NFIX	1423493_a_at 1436363_a_at 1436364_x_at 1451443_at 1459909_at	15435	-0.046	-0.3382	No
117	NAV3	1459440_at	15447	-0.046	-0.3382	No
118	BCL9L	1419180_at 1438806_at 1443700_at 1444855_at	15577	-0.051	-0.3436	No
119	CDC37L1	1417740_at 1430205_a_at 1433574_at 1440886_at 1447753_at	15784	-0.060	-0.3525	No
120	KCNJ2	1450503_at	15909	-0.066	-0.3575	No
121	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	16003	-0.071	-0.3610	No
122	MMRN1	1430621_at 1437260_at	16008	-0.071	-0.3605	No
123	ERBB3	1434606_at 1452482_at	16096	-0.075	-0.3637	No
124	HIST1H1C	1416101_a_at 1436994_a_at 1438204_at	16154	-0.078	-0.3655	No
125	XPO1	1418442_at 1418443_at 1448070_at	16219	-0.081	-0.3676	No
126	ITGBL1	1425039_at	16228	-0.081	-0.3672	No
127	HPCAL1	1448812_at	16305	-0.085	-0.3698	No
128	LST1	1425548_a_at	16332	-0.087	-0.3701	No
129	ITIH2	1417618_at	16423	-0.093	-0.3732	No
130	SON	1420951_a_at 1420952_at 1435862_at 1437924_at 1438871_at 1439074_a_at 1455634_at 1456630_x_at 1457596_at	16445	-0.095	-0.3732	No
131	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	16608	-0.105	-0.3796	No
132	NFKB1	1427705_a_at 1442949_at	16630	-0.107	-0.3794	No
133	FAP	1417552_at	16700	-0.111	-0.3815	No
134	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	16812	-0.119	-0.3853	No
135	NMNAT2	1436155_at	16813	-0.119	-0.3841	No
136	ATOH8	1426418_at	16818	-0.120	-0.3830	No
137	RAB35	1433922_at	16975	-0.132	-0.3889	No
138	IL7R	1448575_at 1448576_at	16982	-0.133	-0.3878	No
139	ARF6	1418822_a_at 1418823_at 1418824_at	17021	-0.136	-0.3881	No
140	PKP4	1438677_at 1452209_at	17095	-0.142	-0.3900	No
141	HIP1R	1425551_at 1425552_at 1425553_s_at 1444832_at	17239	-0.155	-0.3950	No
142	CWF19L2	1453688_at 1456019_at	17507	-0.181	-0.4054	No
143	CLIC1	1416656_at 1458665_at	17741	-0.206	-0.4139	No
144	KLF7	1419354_at 1419355_at 1419356_at 1449439_at 1458389_at	17816	-0.214	-0.4151	No
145	SLC7A11	1420413_at 1443536_at	17899	-0.223	-0.4166	No
146	SMARCA2	1430526_a_at 1439930_at 1452333_at	17965	-0.232	-0.4172	No
147	SLA2	1437504_at 1451492_at	18091	-0.251	-0.4203	No
148	BRMS1L	1452850_s_at 1460443_at	18343	-0.286	-0.4289	No
149	RNF24	1436101_at 1453929_at	18416	-0.296	-0.4292	No
150	HNF4A	1421983_s_at 1427000_at 1427001_s_at 1450447_at	18600	-0.322	-0.4343	No
151	TGIF	1422286_a_at	18672	-0.332	-0.4341	No
152	HNRPUL1	1451984_at	18773	-0.350	-0.4351	No
153	PDCD4	1444171_at	18795	-0.354	-0.4324	No
154	EDN1	1451924_a_at	18813	-0.357	-0.4295	No
155	SLC25A23	1419045_at	18942	-0.383	-0.4314	No
156	STAT6	1421708_a_at 1426353_at	19177	-0.434	-0.4377	No
157	SWAP70	1423543_at 1434225_at 1440809_at	19226	-0.445	-0.4353	No
158	CHD6	1427384_at 1431047_at	19393	-0.483	-0.4379	No
159	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	19530	-0.519	-0.4388	No
160	LAG3	1449911_at	19763	-0.583	-0.4434	Yes
161	SLCO2A1	1420913_at 1450032_at	19797	-0.592	-0.4388	Yes
162	TCF4	1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at	19931	-0.634	-0.4384	Yes
163	PDE3B	1433694_at	20125	-0.705	-0.4400	Yes
164	STAG2	1421849_at 1450396_at	20247	-0.758	-0.4377	Yes
165	VAMP4	1422895_at 1422896_at 1434796_at	20260	-0.767	-0.4303	Yes
166	SERTAD4	1454877_at	20427	-0.835	-0.4293	Yes
167	LTA	1420353_at	20615	-0.930	-0.4283	Yes
168	RFX5	1423103_at	20655	-0.955	-0.4202	Yes
169	MXI1	1425732_a_at 1450376_at	20751	-1.032	-0.4139	Yes
170	DEF6	1452796_at	20790	-1.057	-0.4047	Yes
171	JUNB	1415899_at	20884	-1.130	-0.3973	Yes
172	H2AFV	1428029_a_at 1436596_at	21023	-1.274	-0.3905	Yes
173	DUSP6	1415834_at	21026	-1.279	-0.3774	Yes
174	JMJD1A	1426810_at	21136	-1.403	-0.3679	Yes
175	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	21162	-1.435	-0.3542	Yes
176	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	21221	-1.522	-0.3411	Yes
177	BMF	1422995_at 1454880_s_at 1458325_x_at	21256	-1.564	-0.3265	Yes
178	AKT2	1421324_a_at 1424480_s_at 1455703_at	21275	-1.583	-0.3110	Yes
179	PAN3	1428768_at 1440149_at 1447895_x_at 1458465_at	21407	-1.816	-0.2982	Yes
180	PPP3CB	1427468_at 1428473_at 1428474_at 1433835_at 1446149_at 1459378_at	21553	-2.158	-0.2826	Yes
181	FUT8	1441015_at 1442483_at 1443656_at 1456367_at 1460319_at	21554	-2.160	-0.2602	Yes
182	NEDD9	1422818_at 1437132_x_at 1447885_x_at 1450767_at	21649	-2.458	-0.2391	Yes
183	FGF13	1418497_at 1418498_at	21695	-2.635	-0.2140	Yes
184	MRPL51	1416877_a_at 1416878_at 1416879_at	21708	-2.749	-0.1861	Yes
185	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	21730	-2.819	-0.1579	Yes
186	PSCDBP	1435697_a_at 1451206_s_at	21790	-3.077	-0.1288	Yes
187	PRKAG1	1417690_at 1433533_x_at 1457803_at	21794	-3.115	-0.0967	Yes
188	GNB4	1419469_at 1419470_at	21801	-3.148	-0.0644	Yes
189	IGF1R	1426565_at 1437219_at 1443566_at 1445600_at 1445664_at 1446303_at	21844	-3.404	-0.0312	Yes
190	CDKN2C	1416868_at 1439164_at	21847	-3.418	0.0041	Yes