Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | SCID |
GeneSet | SGCGSSAAA_V$E2F1DP2_01 |
Enrichment Score (ES) | 0.51262385 |
Normalized Enrichment Score (NES) | 1.5771543 |
Nominal p-value | 0.0 |
FDR q-value | 0.15433772 |
FWER p-Value | 0.563 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | CDCA7 | 1428069_at 1445681_at | 43 | 4.243 | 0.0460 | Yes | ||
2 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 46 | 4.236 | 0.0938 | Yes | ||
3 | HNRPD | 1425142_a_at 1446083_at | 59 | 3.935 | 0.1378 | Yes | ||
4 | FKBP5 | 1416125_at 1447736_at 1448231_at 1458089_at | 110 | 3.370 | 0.1736 | Yes | ||
5 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 251 | 2.504 | 0.1955 | Yes | ||
6 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 258 | 2.467 | 0.2231 | Yes | ||
7 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 280 | 2.372 | 0.2490 | Yes | ||
8 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 310 | 2.282 | 0.2735 | Yes | ||
9 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 402 | 2.038 | 0.2924 | Yes | ||
10 | CDC6 | 1417019_a_at | 622 | 1.567 | 0.3001 | Yes | ||
11 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 664 | 1.498 | 0.3151 | Yes | ||
12 | UNG | 1425753_a_at | 734 | 1.410 | 0.3279 | Yes | ||
13 | GMNN | 1417506_at | 766 | 1.376 | 0.3421 | Yes | ||
14 | ATAD2 | 1436174_at 1443146_at 1443229_at | 798 | 1.334 | 0.3557 | Yes | ||
15 | SNRPD1 | 1416336_s_at | 926 | 1.209 | 0.3636 | Yes | ||
16 | TOPBP1 | 1452241_at 1458480_at | 1029 | 1.121 | 0.3716 | Yes | ||
17 | ATF5 | 1425927_a_at | 1030 | 1.120 | 0.3843 | Yes | ||
18 | MYC | 1424942_a_at | 1043 | 1.111 | 0.3963 | Yes | ||
19 | CLSPN | 1441984_at 1456280_at | 1091 | 1.069 | 0.4062 | Yes | ||
20 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1092 | 1.069 | 0.4183 | Yes | ||
21 | POLE2 | 1427094_at 1431440_at | 1190 | 1.000 | 0.4252 | Yes | ||
22 | POLD1 | 1448187_at 1456055_x_at | 1223 | 0.980 | 0.4348 | Yes | ||
23 | RANBP1 | 1422547_at | 1425 | 0.874 | 0.4354 | Yes | ||
24 | RQCD1 | 1450887_at | 1563 | 0.810 | 0.4383 | Yes | ||
25 | MXD3 | 1422970_at 1438847_at 1448878_at | 1622 | 0.783 | 0.4445 | Yes | ||
26 | PHF5A | 1424170_at | 1645 | 0.768 | 0.4522 | Yes | ||
27 | SLC9A5 | 1420070_a_at 1455760_at | 1759 | 0.718 | 0.4551 | Yes | ||
28 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 1778 | 0.711 | 0.4623 | Yes | ||
29 | DNAJC9 | 1426473_at | 1805 | 0.702 | 0.4691 | Yes | ||
30 | HMGA1 | 1416184_s_at | 1840 | 0.692 | 0.4754 | Yes | ||
31 | MCM2 | 1434079_s_at 1448777_at | 1953 | 0.651 | 0.4776 | Yes | ||
32 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 2004 | 0.634 | 0.4825 | Yes | ||
33 | YBX2 | 1420762_a_at | 2026 | 0.628 | 0.4886 | Yes | ||
34 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 2066 | 0.615 | 0.4938 | Yes | ||
35 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 2279 | 0.560 | 0.4904 | Yes | ||
36 | SUV39H1 | 1427382_a_at 1432227_at 1432236_a_at | 2351 | 0.541 | 0.4932 | Yes | ||
37 | AP1S1 | 1416087_at | 2354 | 0.540 | 0.4993 | Yes | ||
38 | MSH5 | 1430771_a_at 1449537_at | 2385 | 0.534 | 0.5039 | Yes | ||
39 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 2458 | 0.516 | 0.5065 | Yes | ||
40 | MRPL40 | 1448849_at | 2546 | 0.499 | 0.5081 | Yes | ||
41 | ILF3 | 1422546_at 1436802_at 1460669_at | 2570 | 0.492 | 0.5126 | Yes | ||
42 | PCSK1 | 1421396_at | 2937 | 0.428 | 0.5007 | No | ||
43 | SYNGR4 | 1418875_at | 3049 | 0.410 | 0.5002 | No | ||
44 | PRPS1 | 1416052_at | 3171 | 0.392 | 0.4991 | No | ||
45 | AK2 | 1448450_at 1448451_at | 3259 | 0.380 | 0.4994 | No | ||
46 | TYRO3 | 1425248_a_at 1425249_a_at | 3303 | 0.375 | 0.5017 | No | ||
47 | RET | 1421359_at | 3616 | 0.340 | 0.4913 | No | ||
48 | ZBTB4 | 1429722_at 1460488_at | 4473 | 0.277 | 0.4552 | No | ||
49 | PAQR4 | 1423101_at | 4481 | 0.277 | 0.4580 | No | ||
50 | PKMYT1 | 1418481_at 1438601_at | 4550 | 0.273 | 0.4579 | No | ||
51 | FANCC | 1442265_at 1447632_at 1450861_at | 4769 | 0.264 | 0.4509 | No | ||
52 | H2AFZ | 1441370_at | 5496 | 0.231 | 0.4203 | No | ||
53 | FHOD1 | 1435557_at | 5614 | 0.227 | 0.4175 | No | ||
54 | STK35 | 1431107_at 1439802_at | 5726 | 0.223 | 0.4149 | No | ||
55 | KCNS2 | 1421342_at 1441211_at 1457325_at | 5975 | 0.213 | 0.4060 | No | ||
56 | E2F3 | 1427462_at 1434564_at | 6026 | 0.211 | 0.4060 | No | ||
57 | MCM4 | 1416214_at 1436708_x_at | 6049 | 0.210 | 0.4074 | No | ||
58 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 6643 | 0.190 | 0.3824 | No | ||
59 | GLRA3 | 1450239_at | 7024 | 0.178 | 0.3670 | No | ||
60 | PCNA | 1417947_at | 7044 | 0.177 | 0.3681 | No | ||
61 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 7164 | 0.174 | 0.3646 | No | ||
62 | AP4M1 | 1418846_at | 7271 | 0.170 | 0.3617 | No | ||
63 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 7333 | 0.169 | 0.3608 | No | ||
64 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 7608 | 0.160 | 0.3501 | No | ||
65 | KCNA6 | 1421568_at 1441049_at 1456954_at | 7776 | 0.155 | 0.3442 | No | ||
66 | MYH10 | 1441057_at 1452740_at | 8799 | 0.129 | 0.2988 | No | ||
67 | FANCG | 1420960_at | 9663 | 0.108 | 0.2605 | No | ||
68 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 10079 | 0.098 | 0.2425 | No | ||
69 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 10304 | 0.093 | 0.2333 | No | ||
70 | RPS20 | 1456373_x_at 1456436_x_at | 10317 | 0.093 | 0.2338 | No | ||
71 | GABRB3 | 1421189_at 1421190_at 1435021_at | 10900 | 0.079 | 0.2080 | No | ||
72 | MAZ | 1427099_at | 11861 | 0.056 | 0.1647 | No | ||
73 | PHF15 | 1430081_at 1455345_at | 12053 | 0.051 | 0.1565 | No | ||
74 | NRK | 1436399_s_at 1450078_at 1450079_at | 12210 | 0.047 | 0.1499 | No | ||
75 | HOXC10 | 1439798_at | 12336 | 0.045 | 0.1447 | No | ||
76 | PTMA | 1423455_at | 12819 | 0.034 | 0.1229 | No | ||
77 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 12965 | 0.030 | 0.1166 | No | ||
78 | ACBD6 | 1452601_a_at 1453199_at | 13205 | 0.024 | 0.1060 | No | ||
79 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 13210 | 0.024 | 0.1060 | No | ||
80 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 13468 | 0.016 | 0.0944 | No | ||
81 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 14132 | -0.002 | 0.0641 | No | ||
82 | PODN | 1435180_at | 14260 | -0.006 | 0.0583 | No | ||
83 | MSH2 | 1416988_at 1447888_x_at | 15440 | -0.046 | 0.0048 | No | ||
84 | FMO4 | 1425799_at 1444852_at | 15487 | -0.048 | 0.0033 | No | ||
85 | CASP8AP2 | 1449217_at | 16429 | -0.094 | -0.0388 | No | ||
86 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 16751 | -0.116 | -0.0522 | No | ||
87 | PLAGL1 | 1426208_x_at 1438588_at 1450533_a_at | 17152 | -0.147 | -0.0689 | No | ||
88 | GATA1 | 1449232_at | 17210 | -0.153 | -0.0698 | No | ||
89 | PRKDC | 1451576_at | 17327 | -0.164 | -0.0732 | No | ||
90 | GPRC5B | 1424613_at 1451411_at | 17333 | -0.164 | -0.0716 | No | ||
91 | EED | 1448653_at | 17478 | -0.178 | -0.0762 | No | ||
92 | HCN3 | 1451023_at | 17698 | -0.200 | -0.0840 | No | ||
93 | FBXO5 | 1429499_at | 17869 | -0.220 | -0.0893 | No | ||
94 | USP37 | 1434242_at 1438212_at | 18018 | -0.241 | -0.0933 | No | ||
95 | USP52 | 1426700_a_at | 18283 | -0.280 | -0.1022 | No | ||
96 | BRMS1L | 1452850_s_at 1460443_at | 18343 | -0.286 | -0.1017 | No | ||
97 | PPM1D | 1434142_at 1449092_at 1459069_at | 18374 | -0.291 | -0.0998 | No | ||
98 | CDC25A | 1417131_at 1417132_at 1445995_at | 18425 | -0.297 | -0.0987 | No | ||
99 | PHC1 | 1423212_at | 18618 | -0.325 | -0.1039 | No | ||
100 | ALDH6A1 | 1448104_at | 18695 | -0.335 | -0.1036 | No | ||
101 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 18697 | -0.335 | -0.0998 | No | ||
102 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 18750 | -0.345 | -0.0983 | No | ||
103 | HNRPUL1 | 1451984_at | 18773 | -0.350 | -0.0953 | No | ||
104 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 18967 | -0.388 | -0.0998 | No | ||
105 | IL4I1 | 1419192_at | 19449 | -0.495 | -0.1162 | No | ||
106 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 19503 | -0.512 | -0.1129 | No | ||
107 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 19582 | -0.533 | -0.1104 | No | ||
108 | PIM1 | 1423006_at 1435458_at | 19899 | -0.622 | -0.1179 | No | ||
109 | STAG2 | 1421849_at 1450396_at | 20247 | -0.758 | -0.1252 | No | ||
110 | TRIM39 | 1418851_at | 20684 | -0.980 | -0.1341 | No | ||
111 | H2AFV | 1428029_a_at 1436596_at | 21023 | -1.274 | -0.1352 | No | ||
112 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 21284 | -1.599 | -0.1290 | No | ||
113 | MCM3 | 1420029_at 1426653_at | 21483 | -1.983 | -0.1157 | No | ||
114 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21583 | -2.218 | -0.0951 | No | ||
115 | ZCCHC8 | 1423755_at 1441639_at | 21773 | -2.986 | -0.0700 | No | ||
116 | ID3 | 1416630_at | 21780 | -3.031 | -0.0360 | No | ||
117 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 21885 | -3.812 | 0.0023 | No |