Details for gene set TAKEDA_NUP8_HOXA9_8D

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	TAKEDA_NUP8_HOXA9_8D_DN
Enrichment Score (ES)	-0.5267119
Normalized Enrichment Score (NES)	-1.7019506
Nominal p-value	0.0
FDR q-value	0.17411889
FWER p-Value	0.897

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GPR97	1417894_at	215	2.720	0.0176	No
2	ENC1	1420964_at 1420965_a_at 1450061_at	273	2.403	0.0393	No
3	NRP1	1418084_at 1448943_at 1448944_at 1457198_at	379	2.098	0.0557	No
4	S100B	1419383_at 1434342_at	405	2.034	0.0751	No
5	KCNMA1	1424848_at 1425987_a_at 1440728_at 1444973_at 1445774_at 1457018_at	435	1.963	0.0936	No
6	MMP9	1416298_at 1448291_at	529	1.771	0.1072	No
7	PRNP	1416130_at 1446507_at 1448233_at	889	1.229	0.1031	No
8	CTSB	1417490_at 1417491_at 1417492_at 1444987_at 1448732_at	1033	1.118	0.1079	No
9	EXT1	1417730_at 1439877_at 1440011_at 1440092_at 1456655_at 1458054_at 1458296_at	1458	0.859	0.0971	No
10	EMP1	1416529_at 1459171_at	1632	0.776	0.0970	No
11	RAP2A	1421574_at 1426965_at 1440473_at	1793	0.707	0.0968	No
12	ETNK1	1419884_at 1430996_at 1433514_at 1433515_s_at 1439972_at 1449650_at 1454633_at	1970	0.647	0.0952	No
13	CD9	1416066_at	2024	0.628	0.0991	No
14	CST7	1419202_at 1445263_at	2357	0.539	0.0893	No
15	ADAM19	1418402_at 1418403_at	2373	0.536	0.0941	No
16	CLU	1418626_a_at 1437458_x_at 1437689_x_at 1454849_x_at	2841	0.445	0.0771	No
17	IL10	1450330_at	2846	0.444	0.0814	No
18	C1QA	1417381_at	2871	0.439	0.0848	No
19	PLA2G7	1430700_a_at	2997	0.421	0.0833	No
20	EPAS1	1435436_at 1449888_at	3108	0.401	0.0823	No
21	MMP14	1416572_at 1448383_at	3458	0.357	0.0699	No
22	C9ORF19	1428492_at 1452803_at	3962	0.312	0.0499	No
23	CXCL1	1419209_at 1441855_x_at 1457644_s_at	3966	0.311	0.0529	No
24	CREB5	1440089_at 1442576_at 1457222_at	4076	0.302	0.0510	No
25	C5AR1	1422190_at 1439902_at	4101	0.301	0.0529	No
26	ARHGAP18	1426952_at 1431133_at 1438882_at	4410	0.281	0.0416	No
27	CD14	1417268_at	4702	0.266	0.0309	No
28	ST8SIA1	1419694_at 1419695_at 1455695_at	4749	0.264	0.0315	No
29	CLEC7A	1420699_at	4946	0.255	0.0251	No
30	LGMN	1448883_at	4957	0.254	0.0272	No
31	CDC42	1415724_a_at 1435807_at 1449574_a_at 1460708_s_at	5007	0.252	0.0275	No
32	OLIG1	1416149_at	5335	0.238	0.0149	No
33	GPNMB	1439345_at 1448303_at	5470	0.232	0.0111	No
34	ANTXR1	1431995_at 1451446_at 1458657_at	5563	0.228	0.0092	No
35	SLC11A1	1420361_at	5820	0.219	-0.0004	No
36	MAF	1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at	5957	0.213	-0.0045	No
37	GPR34	1422542_at	6021	0.211	-0.0052	No
38	PPBP	1418480_at	6043	0.210	-0.0041	No
39	RAB30	1426452_a_at	6189	0.205	-0.0087	No
40	HTR2C	1435513_at 1450477_at	6286	0.202	-0.0110	No
41	SLC41A2	1452445_at	6672	0.189	-0.0268	No
42	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	7077	0.176	-0.0436	No
43	HK3	1435490_at 1442798_x_at	7504	0.164	-0.0615	No
44	F5	1449269_at	7581	0.161	-0.0633	No
45	CLEC5A	1421366_at	7792	0.154	-0.0714	No
46	HRH4	1426099_at	7923	0.151	-0.0759	No
47	RPS6KA2	1417542_at 1417543_at 1441311_at	7944	0.150	-0.0753	No
48	HTRA1	1416749_at 1438251_x_at	8249	0.143	-0.0878	No
49	TCERG1	1421033_a_at 1434434_s_at 1450100_a_at	8345	0.140	-0.0907	No
50	CD200R1	1422191_at 1439703_at	8605	0.134	-0.1012	No
51	COLEC12	1419693_at 1446535_at	8690	0.132	-0.1038	No
52	RAPGEF2	1452833_at	8715	0.131	-0.1035	No
53	UHMK1	1446120_at 1454260_at	8734	0.131	-0.1030	No
54	CDH8	1422052_at 1441690_at 1455365_at 1456221_at	9236	0.118	-0.1249	No
55	ST6GALNAC5	1419420_at 1446059_at 1449468_at	9411	0.114	-0.1317	No
56	UTS2	1421799_at	9413	0.114	-0.1306	No
57	IL5RA	1421620_at	10059	0.098	-0.1592	No
58	MS4A2	1421475_at 1443264_at	10272	0.093	-0.1680	No
59	MARCO	1449498_at 1458297_s_at	10306	0.093	-0.1686	No
60	MMP12	1449153_at	10362	0.092	-0.1702	No
61	SRPX	1451939_a_at	10440	0.090	-0.1728	No
62	PTCD1	1416391_at 1425096_a_at	10478	0.089	-0.1736	No
63	STAC	1418957_at 1445344_at	10667	0.085	-0.1814	No
64	PPP1R1B	1451331_at	11087	0.074	-0.1999	No
65	CAMK1D	1426389_at 1438643_at 1452050_at	11214	0.072	-0.2049	No
66	NEK1	1434267_at 1438592_at 1453612_at 1458211_at	11603	0.063	-0.2221	No
67	ATP6V0D2	1434798_at 1444176_at	11804	0.057	-0.2307	No
68	DACH1	1420694_a_at 1420695_at 1433743_at 1447174_at 1459381_at	11813	0.057	-0.2305	No
69	PDK4	1417273_at	11877	0.055	-0.2328	No
70	SLCO2B1	1433933_s_at 1454777_at 1458171_at	12366	0.044	-0.2548	No
71	SLC25A27	1431201_at 1440090_at 1454230_a_at 1458119_at	12417	0.043	-0.2567	No
72	TSPAN2	1424567_at 1424568_at 1432417_a_at	12521	0.040	-0.2610	No
73	FPR1	1450808_at	12605	0.038	-0.2644	No
74	ABP1	1420709_s_at 1424600_at	12957	0.030	-0.2802	No
75	DOCK4	1431114_at 1436405_at 1441462_at 1441469_at 1446283_at 1457146_at 1459279_at	13206	0.024	-0.2914	No
76	TEX15	1420719_at	13508	0.015	-0.3050	No
77	ALDH2	1434987_at 1434988_x_at 1437410_at 1448143_at	13533	0.014	-0.3060	No
78	GJA4	1416255_at	13639	0.011	-0.3107	No
79	ALOX5	1441962_at	13651	0.011	-0.3111	No
80	RNASE1	1416523_at	13690	0.010	-0.3127	No
81	CXCL5	1419728_at	13874	0.005	-0.3211	No
82	ANKRD29	1436294_at 1438756_at	13893	0.005	-0.3219	No
83	ADAM9	1416094_at	14117	-0.002	-0.3321	No
84	DAB2	1420498_a_at 1423805_at 1429693_at 1430604_a_at	14484	-0.013	-0.3488	No
85	JUN	1417409_at 1448694_at	14497	-0.014	-0.3492	No
86	SLC16A7	1448502_at	14631	-0.018	-0.3551	No
87	SLPI	1448377_at	14745	-0.021	-0.3601	No
88	IL1R2	1419532_at 1457108_at	14757	-0.022	-0.3604	No
89	PNPLA1	1457448_at	14807	-0.023	-0.3624	No
90	NCF2	1448561_at	14861	-0.025	-0.3646	No
91	SLC30A7	1450697_at	14954	-0.028	-0.3685	No
92	CD163	1419144_at	15369	-0.044	-0.3871	No
93	C1QC	1449401_at	15631	-0.053	-0.3985	No
94	P2RY10	1452815_at	15647	-0.054	-0.3987	No
95	ITGAM	1422046_at	16240	-0.082	-0.4250	No
96	RAPH1	1434302_at 1434303_at 1444586_at 1456918_at	16455	-0.095	-0.4339	No
97	C1QB	1417063_at 1434366_x_at 1437726_x_at 1457322_at	16476	-0.097	-0.4338	No
98	TRPA1	1457164_at	16539	-0.102	-0.4356	No
99	ZDHHC19	1438607_at	16594	-0.105	-0.4370	No
100	FCGR2B	1435476_a_at 1435477_s_at 1447622_at 1451941_a_at 1455332_x_at	16627	-0.107	-0.4374	No
101	ATP10D	1436544_at	16815	-0.120	-0.4448	No
102	CD24	1416034_at 1437502_x_at 1448182_a_at	16822	-0.120	-0.4439	No
103	IL7R	1448575_at 1448576_at	16982	-0.133	-0.4498	No
104	SFRS4	1448778_at	17201	-0.152	-0.4583	No
105	SLC7A7	1417392_a_at 1447181_s_at	17267	-0.158	-0.4597	No
106	C1ORF24	1422567_at 1454942_at	17269	-0.158	-0.4581	No
107	NPL	1424265_at	17530	-0.183	-0.4682	No
108	ELOVL7	1424097_at 1424098_at 1440354_at 1441891_x_at	17656	-0.197	-0.4720	No
109	SLC16A6	1417884_at	17660	-0.198	-0.4701	No
110	ENTPD1	1423326_at 1450939_at 1453586_at	17679	-0.199	-0.4689	No
111	SLC26A11	1436865_at 1460115_at	17853	-0.218	-0.4747	No
112	SLAMF8	1425294_at	18046	-0.245	-0.4810	No
113	CYBB	1422978_at 1436778_at 1436779_at	18055	-0.246	-0.4789	No
114	PYGL	1417741_at	18096	-0.251	-0.4782	No
115	IL3RA	1419712_at	18157	-0.261	-0.4783	No
116	CHI3L1	1451537_at	18176	-0.263	-0.4765	No
117	ARPC5	1444568_at 1448129_at	18205	-0.267	-0.4751	No
118	LGALS12	1417686_at 1417687_at	18670	-0.332	-0.4930	No
119	C7ORF10	1424597_at 1451404_at	18855	-0.366	-0.4978	No
120	AMFR	1450102_a_at	19062	-0.408	-0.5031	No
121	CAPZA2	1423057_at 1423058_at	19115	-0.419	-0.5013	No
122	TRAT1	1427532_at 1437561_at	19578	-0.532	-0.5171	No
123	NIPBL	1430309_at 1437158_at 1440690_at 1442103_at 1443992_at 1447408_at 1453576_at	19594	-0.536	-0.5124	No
124	TM6SF1	1451353_at	19618	-0.543	-0.5079	No
125	TGFBI	1415871_at 1437463_x_at 1448123_s_at 1456250_x_at	20028	-0.669	-0.5200	Yes
126	RHOH	1429319_at 1441385_at 1443015_at	20029	-0.669	-0.5132	Yes
127	CORO2A	1445034_at 1452367_at	20127	-0.706	-0.5105	Yes
128	GPR137B	1443208_at 1449670_x_at 1449671_at 1450881_s_at	20215	-0.739	-0.5070	Yes
129	NDRG2	1448154_at	20288	-0.776	-0.5025	Yes
130	SGK	1416041_at	20303	-0.782	-0.4952	Yes
131	MARCH1	1431367_at 1434955_at 1440209_at	20416	-0.831	-0.4920	Yes
132	TDO2	1419093_at 1449337_at	20518	-0.879	-0.4877	Yes
133	LCP2	1418641_at 1418642_at	20596	-0.919	-0.4820	Yes
134	RAB3C	1432415_at 1432432_a_at 1449494_at	20662	-0.962	-0.4752	Yes
135	HVCN1	1424032_at	20762	-1.041	-0.4693	Yes
136	HSD11B1	1449038_at	20811	-1.070	-0.4607	Yes
137	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20871	-1.116	-0.4521	Yes
138	BCL2	1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at	20911	-1.157	-0.4422	Yes
139	PCSK5	1424605_at 1437339_s_at 1438248_at 1451406_a_at 1452475_at 1459124_at	20913	-1.159	-0.4305	Yes
140	FYB	1452117_a_at	20961	-1.211	-0.4205	Yes
141	RAP1A	1424139_at	21116	-1.376	-0.4136	Yes
142	PPP1R3B	1436590_at	21271	-1.578	-0.4048	Yes
143	CUTL1	1424667_a_at 1424668_a_at 1425611_a_at 1425612_at 1434683_at 1437686_x_at 1440465_at 1447295_at 1451435_at	21299	-1.623	-0.3896	Yes
144	LFNG	1420643_at 1449943_at	21368	-1.723	-0.3753	Yes
145	ABI1	1423177_a_at 1423178_at 1450890_a_at	21599	-2.263	-0.3630	Yes
146	NKTR	1423248_at 1423249_at 1437660_at 1440804_at 1458676_at	21610	-2.316	-0.3401	Yes
147	HIPK1	1421298_a_at 1424540_at 1457515_at	21623	-2.346	-0.3169	Yes
148	ETS1	1422027_a_at 1422028_a_at 1426725_s_at 1452163_at	21652	-2.465	-0.2933	Yes
149	AKAP13	1430445_at 1433722_at 1436933_at 1439254_at 1440392_at 1440977_at 1443923_at 1445311_at 1447663_at	21705	-2.721	-0.2682	Yes
150	BCL6	1421818_at 1450381_a_at	21747	-2.870	-0.2411	Yes
151	PRDM2	1429251_at 1444123_at 1453068_at	21763	-2.922	-0.2122	Yes
152	ITM2A	1423608_at 1451047_at	21772	-2.980	-0.1825	Yes
153	IGF2R	1424111_at 1424112_at 1440979_at 1445966_at 1457356_at	21786	-3.055	-0.1522	Yes
154	IFNGR1	1443602_at 1448167_at	21802	-3.165	-0.1209	Yes
155	KLF2	1448890_at	21824	-3.304	-0.0885	Yes
156	S100A9	1448756_at	21895	-4.073	-0.0505	Yes
157	S100A8	1419394_s_at	21925	-5.183	0.0005	Yes