DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classSCID
GeneSetSCHUMACHER_MYC_UP
Enrichment Score (ES)0.7129444
Normalized Enrichment Score (NES)1.9538834
Nominal p-value0.0
FDR q-value8.326219E-4
FWER p-Value0.0090
Table: GSEA Results Summary



Fig 1: Enrichment plot: SCHUMACHER_MYC_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1EBNA1BP21428315_at 1437512_x_at 1439898_at 1457668_x_at623.8650.0941Yes
2MTHFD11415916_a_at 1415917_at 1436704_x_at1613.0580.1663Yes
3NOLC11428869_at 1428870_at 1450087_a_at2582.4670.2238Yes
4MRPL31422463_a_at 1422464_at 1431006_at 1440636_at3462.1700.2742Yes
5TFRC1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at5631.6960.3068Yes
6HSPE11450668_s_at6631.4990.3399Yes
7FXN1427282_a_at7371.4090.3719Yes
8PYCR11424556_at7411.4050.4070Yes
9AHCY1417125_at8061.3280.4374Yes
10SORD1426584_a_at 1438183_x_at8381.2890.4683Yes
11SLC16A11415802_at 1446274_at8391.2860.5005Yes
12JTV11424151_at 1451262_a_at8801.2400.5298Yes
13FABP51416022_at9041.2210.5593Yes
14DHODH1417581_at 1417582_s_at14080.8830.5585Yes
15RANBP11422547_at14250.8740.5797Yes
16PRDX41416166_a_at 1416167_at 1431269_at14570.8590.5998Yes
17LDHA1419737_a_at14620.8570.6211Yes
18UCK21417137_at 1426909_at 1439740_s_at 1439741_x_at 1441858_at 1448604_at 1457980_x_at14930.8430.6409Yes
19POLD21448277_at16200.7850.6548Yes
20CTPS1416563_at16660.7580.6717Yes
21UCHL31452402_at16940.7420.6891Yes
22NME11424110_a_at 1435277_x_at18750.6780.6979Yes
23VRK11425006_a_at 1458951_at20900.6090.7034Yes
24RRS11416998_at 1456865_x_at23020.5530.7076Yes
25POLR2H1424473_at24680.5140.7129Yes
26CYP51A11422533_at 1422534_at 1426173_at 1450646_at29820.4230.7001No
27IARS1426705_s_at 1452154_at36080.3410.6801No
28AKAP11418279_a_at 1449019_at40200.3070.6690No
29DDX211448270_at 1448271_a_at43920.2820.6591No
30PAICS1423564_a_at 1423565_at 1436298_x_at49140.2570.6418No
31AUH1420776_a_at 1430487_at 1431124_at 1444433_at 1445496_at 1445800_at 1447952_at 1458436_at57020.2230.6114No
32GRSF11433457_s_at 1433824_x_at 1437838_x_at 1439366_at60320.2110.6016No
33AEBP11422514_at 1450637_a_at66740.1890.5771No
34FKBP41416362_a_at 1416363_at 1458729_at 1459808_at96170.1090.4454No
35LRP81421459_a_at 1440882_at 1442347_at98610.1030.4369No
36ACSL11422526_at 1423883_at 1447355_at 1450643_s_at 1460316_at101350.0970.4268No
37DDX101428563_at 1452838_at102170.0940.4255No
38PBEF11417190_at 1448607_at112080.0720.3821No
39MEST1423294_at133000.0210.2871No
40SLC39A141425649_at 1427035_at 1438490_at 1457770_at138730.0050.2611No
41ABCE11416014_at 1416015_s_at 1442071_at15172-0.0360.2027No
42PRPS21420637_at 1420638_at 1443418_at 1454843_at15358-0.0430.1953No
43BOP11423264_at 1430491_at16603-0.1050.1411No
44ATP1B31423126_at17275-0.1590.1144No
45RABEPK1433041_at 1448046_at 1451487_at 1454449_at17981-0.2350.0881No
46NEFH1424847_at18111-0.2540.0886No
47CTSC1416382_at 1437939_s_at 1446834_at20770-1.047-0.0066No
48SLC39A61424674_at 1424675_at 1441949_x_at 1447893_x_at20902-1.1510.0163No
49SLC20A11438824_at 1446441_at 1448568_a_at20985-1.2340.0434No
Table: GSEA details [plain text format]



Fig 2: SCHUMACHER_MYC_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SCHUMACHER_MYC_UP: Random ES distribution   
Gene set null distribution of ES for SCHUMACHER_MYC_UP