Details for gene set MOOTHA

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	MOOTHA_VOXPHOS
Enrichment Score (ES)	0.7142997
Normalized Enrichment Score (NES)	2.0800972
Nominal p-value	0.0
FDR q-value	2.5522112E-4
FWER p-Value	0.0010

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COX5B	1416902_a_at 1435613_x_at 1436149_at 1448514_at 1454716_x_at 1456588_x_at	1	6.901	0.1141	Yes
2	ATP5C1	1416058_s_at 1438809_at	29	4.740	0.1913	Yes
3	NDUFA10	1418068_at 1448934_at	51	4.175	0.2594	Yes
4	CYCS	1422484_at 1445484_at	164	3.037	0.3045	Yes
5	ATP5G1	1416020_a_at 1444874_at	227	2.644	0.3454	Yes
6	NDUFB2	1416834_x_at 1442658_at 1448483_a_at 1453806_at	328	2.212	0.3775	Yes
7	NDUFS8	1423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at	337	2.196	0.4134	Yes
8	ATP5G2	1415980_at 1456128_at	502	1.824	0.4361	Yes
9	NDUFC1	1416285_at 1448284_a_at	847	1.273	0.4414	Yes
10	NDUFS7	1424313_a_at 1451312_at	864	1.252	0.4614	Yes
11	NFKBIL2	1428661_at	1059	1.093	0.4706	Yes
12	SDHD	1428235_at 1437489_x_at	1135	1.031	0.4843	Yes
13	NDUFS4	1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at	1166	1.014	0.4997	Yes
14	BCS1L	1451541_at	1183	1.005	0.5156	Yes
15	CYC1	1416604_at	1259	0.960	0.5280	Yes
16	UQCR	1448292_at	1321	0.925	0.5405	Yes
17	ATP5E	1416567_s_at	1345	0.915	0.5546	Yes
18	SDHB	1418005_at	1446	0.863	0.5643	Yes
19	ATP5L	1448203_at	1485	0.846	0.5766	Yes
20	NDUFS6	1433603_at	1631	0.777	0.5828	Yes
21	NDUFA9	1416663_at	1706	0.737	0.5916	Yes
22	COX6C	1415970_at 1434491_a_at	1922	0.661	0.5927	Yes
23	MBD3	1417728_at	1940	0.655	0.6028	Yes
24	NDUFA4	1424085_at	1943	0.654	0.6135	Yes
25	COX7A1	1418709_at	2114	0.603	0.6157	Yes
26	UQCRC1	1428782_a_at	2115	0.601	0.6256	Yes
27	NDUFB6	1434056_a_at 1434057_at	2181	0.583	0.6323	Yes
28	COX7A2	1416970_a_at 1416971_at	2232	0.572	0.6395	Yes
29	COX5A	1415933_a_at 1439267_x_at 1448153_at	2259	0.565	0.6477	Yes
30	NDUFB5	1417102_a_at 1448589_at	2285	0.558	0.6557	Yes
31	NDUFA8	1423692_at	2355	0.539	0.6615	Yes
32	ATP5O	1416278_a_at	2361	0.538	0.6702	Yes
33	NDUFS1	1425143_a_at 1453354_at	2398	0.531	0.6773	Yes
34	ATP5F1	1426742_at 1433562_s_at	2558	0.497	0.6783	Yes
35	ATP5J2	1416269_at 1435395_s_at	2586	0.491	0.6852	Yes
36	NDUFA5	1417285_a_at 1417286_at	2632	0.483	0.6911	Yes
37	PET112L	1424282_at 1444502_at	2683	0.471	0.6966	Yes
38	NDUFA6	1448427_at	2922	0.431	0.6928	Yes
39	ATP5J	1416143_at	3166	0.393	0.6882	Yes
40	SDHC	1435986_x_at 1448630_a_at	3176	0.391	0.6943	Yes
41	NDUFS2	1451096_at	3223	0.385	0.6986	Yes
42	NDUFA7	1422976_x_at 1428360_x_at 1436567_a_at 1450818_a_at 1455749_x_at	3311	0.374	0.7008	Yes
43	ATP5B	1416829_at	3364	0.368	0.7045	Yes
44	CNOT7	1423641_s_at 1430519_a_at 1460665_a_at	3412	0.362	0.7083	Yes
45	ATP5I	1422525_at 1434053_x_at 1450640_x_at	3413	0.362	0.7143	Yes
46	NDUFA2	1417368_s_at	3685	0.334	0.7074	No
47	NDUFS3	1423737_at	3907	0.316	0.7026	No
48	SURF2	1433609_s_at 1453117_at	3967	0.311	0.7050	No
49	NDUFB7	1416417_a_at 1448331_at	4053	0.304	0.7061	No
50	NDUFA3	1428464_at 1430149_at 1452790_x_at	4119	0.300	0.7081	No
51	NDUFB3	1416547_at	4243	0.292	0.7073	No
52	COX11	1429188_at 1457846_at	4930	0.256	0.6802	No
53	ATP5D	1423716_s_at 1456580_s_at	5080	0.249	0.6775	No
54	UQCRFS1	1450968_at	5182	0.245	0.6769	No
55	COX4I1	1448322_a_at	5260	0.241	0.6774	No
56	COX6A2	1417607_at 1457633_x_at	6232	0.203	0.6363	No
57	COX6A1	1417417_a_at	7695	0.157	0.5721	No
58	ATP5G3	1454661_at	8034	0.148	0.5591	No
59	COX10	1429329_at 1446223_at 1459977_x_at	9962	0.101	0.4726	No
60	SURF1	1450561_a_at	10054	0.098	0.4700	No
61	UQCRC2	1428631_a_at 1435757_a_at	10607	0.086	0.4462	No
62	NDUFC2	1431670_at	11217	0.072	0.4195	No
63	SDHA	1426688_at 1426689_s_at 1445317_at	11345	0.069	0.4149	No
64	NDUFB4	1428075_at 1428076_s_at 1432427_at	12291	0.046	0.3724	No
65	UQCRH	1452133_at 1453229_s_at	12494	0.041	0.3639	No
66	ATP5H	1423676_at 1435112_a_at	13608	0.012	0.3131	No
67	CKAP1	1448533_at	14622	-0.017	0.2671	No
68	NDUFS5	1416494_at 1416495_s_at	16242	-0.082	0.1944	No
69	COX7C	1448112_at 1459884_at 1459885_s_at	16794	-0.118	0.1711	No
70	BCL2L1	1420887_a_at 1420888_at 1426050_at 1426191_a_at	16797	-0.118	0.1730	No
71	NDUFB8	1448198_a_at 1458404_at	17221	-0.154	0.1562	No
72	COX15	1426693_x_at 1437982_x_at 1452146_a_at 1460376_a_at	17422	-0.173	0.1499	No
73	COX7A2L	1421772_a_at 1432263_a_at 1432264_x_at	17553	-0.185	0.1470	No
74	NDUFAB1	1428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at	20293	-0.778	0.0346	No
75	NGFRAP1	1428842_a_at	20339	-0.794	0.0457	No
76	UQCRB	1416337_at 1455997_a_at	21322	-1.651	0.0281	No